RNA–Protein interactions for RNA: ENST00000424438.5

RPUSD3-204, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2 BASIC

Gene RPUSD3, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-204ENST00000424438 NEU3Q9UQ49 428 aa15.71■□□□□ 0.11
RPUSD3-204ENST00000424438 MAN2B2Q9Y2E5 1009 aa15.71■□□□□ 0.11
RPUSD3-204ENST00000424438 ANKRD17O75179 2603 aaKnown RBP15.71■□□□□ 0.11
RPUSD3-204ENST00000424438 C9orf172C9J069 976 aa15.7■□□□□ 0.1
RPUSD3-204ENST00000424438 FOXN3O00409 490 aaPredicted RBP15.7■□□□□ 0.1
RPUSD3-204ENST00000424438 IGSF6O95976 241 aa15.7■□□□□ 0.1
RPUSD3-204ENST00000424438 ADRA1BP35368 520 aa15.7■□□□□ 0.1
RPUSD3-204ENST00000424438 KIAA1024LP59773 190 aa15.7■□□□□ 0.1
RPUSD3-204ENST00000424438 HLTFQ14527 1009 aaKnown RBP eCLIP15.7■□□□□ 0.1
RPUSD3-204ENST00000424438 NR1D2Q14995 579 aa15.7■□□□□ 0.1
RPUSD3-204ENST00000424438 C14orf28Q4W4Y0 310 aa15.7■□□□□ 0.1
RPUSD3-204ENST00000424438 TRNP1Q6NT89 227 aa15.7■□□□□ 0.1
RPUSD3-204ENST00000424438 FAM131BQ86XD5 332 aa15.7■□□□□ 0.1
RPUSD3-204ENST00000424438 FAM26EQ8N5C1 309 aa15.7■□□□□ 0.1
RPUSD3-204ENST00000424438 GPBAR1Q8TDU6 330 aa15.7■□□□□ 0.1
RPUSD3-204ENST00000424438 TSACCQ96A04 125 aaPredicted RBP15.7■□□□□ 0.1
RPUSD3-204ENST00000424438 SIX2Q9NPC8 291 aa15.7■□□□□ 0.1
RPUSD3-204ENST00000424438 NDFIP2Q9NV92 336 aa15.7■□□□□ 0.1
RPUSD3-204ENST00000424438 KCNK4Q9NYG8 393 aa15.7■□□□□ 0.1
RPUSD3-204ENST00000424438 AKAP7Q9P0M2 348 aaPredicted RBP15.7■□□□□ 0.1
RPUSD3-204ENST00000424438 SIRPGQ9P1W8 387 aa15.7■□□□□ 0.1
RPUSD3-204ENST00000424438 ACTL7AQ9Y615 435 aa15.7■□□□□ 0.1
RPUSD3-204ENST00000424438 ANKRD36A6QL64 1941 aa15.69■□□□□ 0.1
RPUSD3-204ENST00000424438 STMND1H3BQB6 276 aa15.69■□□□□ 0.1
RPUSD3-204ENST00000424438 TMCC1O94876 653 aa15.69■□□□□ 0.1
RPUSD3-204ENST00000424438 TNFP01375 233 aa15.69■□□□□ 0.1
RPUSD3-204ENST00000424438 WT1P19544 449 aaPredicted RBP15.69■□□□□ 0.1
RPUSD3-204ENST00000424438 ITIH1P19827 911 aa15.69■□□□□ 0.1
RPUSD3-204ENST00000424438 KELP23276 732 aa15.69■□□□□ 0.1
RPUSD3-204ENST00000424438 ETV5P41161 510 aa15.69■□□□□ 0.1
RPUSD3-204ENST00000424438 ISM2Q6H9L7 571 aa15.69■□□□□ 0.1
RPUSD3-204ENST00000424438 ENPP7Q6UWV6 458 aa15.69■□□□□ 0.1
RPUSD3-204ENST00000424438 ZNF438Q7Z4V0 828 aa15.69■□□□□ 0.1
RPUSD3-204ENST00000424438 C17orf82Q86X59 251 aaPredicted RBP15.69■□□□□ 0.1
RPUSD3-204ENST00000424438 ZFAND4Q86XD8 727 aa15.69■□□□□ 0.1
RPUSD3-204ENST00000424438 USP7Q93009 1102 aa15.69■□□□□ 0.1
RPUSD3-204ENST00000424438 CFAP57Q96MR6 1250 aa15.69■□□□□ 0.1
RPUSD3-204ENST00000424438 CATSPER2Q96P56 530 aa15.69■□□□□ 0.1
RPUSD3-204ENST00000424438 LRRC4CQ9HCJ2 640 aa15.69■□□□□ 0.1
RPUSD3-204ENST00000424438 FOXJ2Q9P0K8 574 aa15.69■□□□□ 0.1
RPUSD3-204ENST00000424438 ANAPC2Q9UJX6 822 aa15.69■□□□□ 0.1
RPUSD3-204ENST00000424438 DNAJC12Q9UKB3 198 aa15.69■□□□□ 0.1
RPUSD3-204ENST00000424438 RNF215Q9Y6U7 377 aa15.69■□□□□ 0.1
RPUSD3-204ENST00000424438 CAPN5O15484 640 aaPredicted RBP15.68■□□□□ 0.1
RPUSD3-204ENST00000424438 ZW10O43264 779 aa15.68■□□□□ 0.1
RPUSD3-204ENST00000424438 CPNE6O95741 557 aa15.68■□□□□ 0.1
RPUSD3-204ENST00000424438 ATP1A2P50993 1020 aa15.68■□□□□ 0.1
RPUSD3-204ENST00000424438 STX17P56962 302 aa15.68■□□□□ 0.1
RPUSD3-204ENST00000424438 YBEYP58557 167 aaPredicted RBP15.68■□□□□ 0.1
RPUSD3-204ENST00000424438 TRA2AQ13595 282 aaKnown RBP eCLIP15.68■□□□□ 0.1
RPUSD3-204ENST00000424438 INPP5AQ14642 412 aa15.68■□□□□ 0.1
RPUSD3-204ENST00000424438 CLCA4Q14CN2 919 aa15.68■□□□□ 0.1
RPUSD3-204ENST00000424438 UGP2Q16851 508 aa15.68■□□□□ 0.1
RPUSD3-204ENST00000424438 ATXN7L2Q5T6C5 722 aaPredicted RBP15.68■□□□□ 0.1
RPUSD3-204ENST00000424438 BORAQ6PGQ7 559 aa15.68■□□□□ 0.1
RPUSD3-204ENST00000424438 BRAT1Q6PJG6 821 aa15.68■□□□□ 0.1
RPUSD3-204ENST00000424438 STRADAQ7RTN6 431 aa15.68■□□□□ 0.1
RPUSD3-204ENST00000424438 VASH2Q86V25 355 aa15.68■□□□□ 0.1
RPUSD3-204ENST00000424438 KIAA1524Q8TCG1 905 aa15.68■□□□□ 0.1
RPUSD3-204ENST00000424438 NTAN1Q96AB6 310 aa15.68■□□□□ 0.1
RPUSD3-204ENST00000424438 TBC1D31Q96DN5 1066 aa15.68■□□□□ 0.1
RPUSD3-204ENST00000424438 ZNF641Q96N77 438 aaPredicted RBP15.68■□□□□ 0.1
RPUSD3-204ENST00000424438 PSMG3-AS1Q96PY0 264 aa15.68■□□□□ 0.1
RPUSD3-204ENST00000424438 RWDD2AQ9UIY3 292 aa15.68■□□□□ 0.1
RPUSD3-204ENST00000424438 RP1L1Q8IWN7 2480 aaPredicted RBP15.67■□□□□ 0.1
RPUSD3-204ENST00000424438 LRIG2O94898 1065 aa15.67■□□□□ 0.1
RPUSD3-204ENST00000424438 CYP11B1P15538 503 aa15.67■□□□□ 0.1
RPUSD3-204ENST00000424438 TRIM23P36406 574 aa15.67■□□□□ 0.1
RPUSD3-204ENST00000424438 MMP12P39900 470 aa15.67■□□□□ 0.1
RPUSD3-204ENST00000424438 CASRP41180 1078 aa15.67■□□□□ 0.1
RPUSD3-204ENST00000424438 PTPN9P43378 593 aa15.67■□□□□ 0.1
RPUSD3-204ENST00000424438 FOXK1P85037 733 aa15.67■□□□□ 0.1
RPUSD3-204ENST00000424438 B4GALNT1Q00973 533 aa15.67■□□□□ 0.1
RPUSD3-204ENST00000424438 APBA1Q02410 837 aa15.67■□□□□ 0.1
RPUSD3-204ENST00000424438 SQSTM1Q13501 440 aa15.67■□□□□ 0.1
RPUSD3-204ENST00000424438 TSR1Q2NL82 804 aaKnown RBP15.67■□□□□ 0.1
RPUSD3-204ENST00000424438 PIM3Q86V86 326 aa15.67■□□□□ 0.1
RPUSD3-204ENST00000424438 IRF2BP1Q8IU81 584 aa15.67■□□□□ 0.1
RPUSD3-204ENST00000424438 OR56A4Q8NGH8 313 aa15.67■□□□□ 0.1
RPUSD3-204ENST00000424438 CENPIQ92674 756 aaPredicted RBP15.67■□□□□ 0.1
RPUSD3-204ENST00000424438 HMCESQ96FZ2 354 aa15.67■□□□□ 0.1
RPUSD3-204ENST00000424438 PDXPQ96GD0 296 aa15.67■□□□□ 0.1
RPUSD3-204ENST00000424438 WRAP53Q9BUR4 548 aaKnown RBP15.67■□□□□ 0.1
RPUSD3-204ENST00000424438 EPN3Q9H201 632 aa15.67■□□□□ 0.1
RPUSD3-204ENST00000424438 PLCB1Q9NQ66 1216 aa15.67■□□□□ 0.1
RPUSD3-204ENST00000424438 LRIT1Q9P2V4 623 aa15.67■□□□□ 0.1
RPUSD3-204ENST00000424438 DNAI1Q9UI46 699 aa15.67■□□□□ 0.1
RPUSD3-204ENST00000424438 AJAP1Q9UKB5 411 aaPredicted RBP15.67■□□□□ 0.1
RPUSD3-204ENST00000424438 ABCA12Q86UK0 2595 aa15.67■□□□□ 0.1
RPUSD3-204ENST00000424438 BLACEA4D250 179 aa15.66■□□□□ 0.1
RPUSD3-204ENST00000424438 XPAP23025 273 aaPredicted RBP15.66■□□□□ 0.1
RPUSD3-204ENST00000424438 STAT1P42224 750 aa15.66■□□□□ 0.1
RPUSD3-204ENST00000424438 GPR3P46089 330 aa15.66■□□□□ 0.1
RPUSD3-204ENST00000424438 RHOAP61586 193 aa15.66■□□□□ 0.1
RPUSD3-204ENST00000424438 NOMO3P69849 1222 aa15.66■□□□□ 0.1
RPUSD3-204ENST00000424438 ARHGEF7Q14155 803 aa15.66■□□□□ 0.1
RPUSD3-204ENST00000424438 C16orf72Q14CZ0 275 aa15.66■□□□□ 0.1
RPUSD3-204ENST00000424438 EFHC2Q5JST6 749 aa15.66■□□□□ 0.1
RPUSD3-204ENST00000424438 LRRC73Q5JTD7 316 aa15.66■□□□□ 0.1
RPUSD3-204ENST00000424438 RWDD4Q6NW29 188 aaKnown RBP15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms