RNA–Protein interactions for RNA: ENST00000421124.6

DDR1-233, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5

Gene DDR1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-233	ENST00000421124	FAM182A	Q5T1J6	154 aa		18.72	■□□□□ 0.59
DDR1-233	ENST00000421124	ARMC12	Q5T9G4	340 aa		18.72	■□□□□ 0.59
DDR1-233	ENST00000421124	SEL1L3	Q68CR1	1132 aa		18.72	■□□□□ 0.59
DDR1-233	ENST00000421124	DARS2	Q6PI48	645 aa	Known RBP	18.72	■□□□□ 0.59
DDR1-233	ENST00000421124	SLC13A5	Q86YT5	568 aa	Predicted RBP	18.72	■□□□□ 0.59
DDR1-233	ENST00000421124	KIAA2013	Q8IYS2	634 aa		18.72	■□□□□ 0.59
DDR1-233	ENST00000421124	CXorf40A	Q8TE69	158 aa		18.72	■□□□□ 0.59
DDR1-233	ENST00000421124	KLK6	Q92876	244 aa		18.72	■□□□□ 0.59
DDR1-233	ENST00000421124	SLC25A51	Q9H1U9	297 aa		18.72	■□□□□ 0.59
DDR1-233	ENST00000421124	GLOD4	Q9HC38	313 aa		18.72	■□□□□ 0.59
DDR1-233	ENST00000421124	PHTF1	Q9UMS5	762 aa		18.72	■□□□□ 0.59
DDR1-233	ENST00000421124	SLC6A14	Q9UN76	642 aa		18.72	■□□□□ 0.59
DDR1-233	ENST00000421124	PCDHB9	Q9Y5E1	797 aa		18.72	■□□□□ 0.59
DDR1-233	ENST00000421124	SLCO1B1	Q9Y6L6	691 aa		18.72	■□□□□ 0.59
DDR1-233	ENST00000421124	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	18.72	■□□□□ 0.59
DDR1-233	ENST00000421124	USP27X	A6NNY8	438 aa		18.71	■□□□□ 0.59
DDR1-233	ENST00000421124	RIOK3	O14730	519 aa	Known RBP	18.71	■□□□□ 0.59
DDR1-233	ENST00000421124	ZNF189	O75820	626 aa	Predicted RBP	18.71	■□□□□ 0.59
DDR1-233	ENST00000421124	PRKCG	P05129	697 aa		18.71	■□□□□ 0.59
DDR1-233	ENST00000421124	MMP2	P08253	660 aa		18.71	■□□□□ 0.59
DDR1-233	ENST00000421124	MMP12	P39900	470 aa		18.71	■□□□□ 0.59
DDR1-233	ENST00000421124	CD86	P42081	329 aa		18.71	■□□□□ 0.59
DDR1-233	ENST00000421124	AFF3	P51826	1226 aa	Known RBP	18.71	■□□□□ 0.59
DDR1-233	ENST00000421124	RACK1	P63244	317 aa	Known RBP	18.71	■□□□□ 0.59
DDR1-233	ENST00000421124	IRX4	P78413	519 aa		18.71	■□□□□ 0.59
DDR1-233	ENST00000421124	SKOR1	P84550	965 aa		18.71	■□□□□ 0.59
DDR1-233	ENST00000421124	TMEM52B	Q4KMG9	183 aa		18.71	■□□□□ 0.59
DDR1-233	ENST00000421124	NAPEPLD	Q6IQ20	393 aa		18.71	■□□□□ 0.59
DDR1-233	ENST00000421124	SLC35F6	Q8N357	371 aa		18.71	■□□□□ 0.59
DDR1-233	ENST00000421124	IMP4	Q96G21	291 aa	Known RBP	18.71	■□□□□ 0.59
DDR1-233	ENST00000421124	SERAC1	Q96JX3	654 aa		18.71	■□□□□ 0.59
DDR1-233	ENST00000421124	SLC6A18	Q96N87	628 aa		18.71	■□□□□ 0.59
DDR1-233	ENST00000421124	TDRD1	Q9BXT4	1180 aa	Known RBP	18.71	■□□□□ 0.59
DDR1-233	ENST00000421124	SLC17A9	Q9BYT1	436 aa		18.71	■□□□□ 0.59
DDR1-233	ENST00000421124	C10orf88	Q9H8K7	445 aa		18.71	■□□□□ 0.59
DDR1-233	ENST00000421124	CAPN10	Q9HC96	672 aa		18.71	■□□□□ 0.59
DDR1-233	ENST00000421124	KLHL8	Q9P2G9	620 aa	Predicted RBP	18.71	■□□□□ 0.59
DDR1-233	ENST00000421124	TRHDE	Q9UKU6	1024 aa		18.71	■□□□□ 0.59
DDR1-233	ENST00000421124	R3HDM2	Q9Y2K5	976 aa	Known RBP	18.71	■□□□□ 0.59
DDR1-233	ENST00000421124	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	18.71	■□□□□ 0.59
DDR1-233	ENST00000421124	IGLON5	A6NGN9	336 aa		18.7	■□□□□ 0.58
DDR1-233	ENST00000421124	PRAMEF26	H0Y7S4	382 aa		18.7	■□□□□ 0.58
DDR1-233	ENST00000421124	ENC1	O14682	589 aa		18.7	■□□□□ 0.58
DDR1-233	ENST00000421124	SLC31A1	O15431	190 aa		18.7	■□□□□ 0.58
DDR1-233	ENST00000421124	FZD6	O60353	706 aa		18.7	■□□□□ 0.58
DDR1-233	ENST00000421124	PRLR	P16471	622 aa		18.7	■□□□□ 0.58
DDR1-233	ENST00000421124	NFKBIA	P25963	317 aa		18.7	■□□□□ 0.58
DDR1-233	ENST00000421124	GRIA4	P48058	902 aa		18.7	■□□□□ 0.58
DDR1-233	ENST00000421124	FAM193A	P78312	1265 aa		18.7	■□□□□ 0.58
DDR1-233	ENST00000421124	TEAD4	Q15561	434 aa		18.7	■□□□□ 0.58
DDR1-233	ENST00000421124	AASDH	Q4L235	1098 aa	Predicted RBP	18.7	■□□□□ 0.58
DDR1-233	ENST00000421124	PID1	Q7Z2X4	250 aa		18.7	■□□□□ 0.58
DDR1-233	ENST00000421124	ZNF567	Q8N184	647 aa		18.7	■□□□□ 0.58
DDR1-233	ENST00000421124	RBM15	Q96T37	977 aa	Known RBP eCLIP	18.7	■□□□□ 0.58
DDR1-233	ENST00000421124	WRAP53	Q9BUR4	548 aa	Known RBP	18.7	■□□□□ 0.58
DDR1-233	ENST00000421124	C1QTNF2	Q9BXJ5	285 aa		18.7	■□□□□ 0.58
DDR1-233	ENST00000421124	AASDHPPT	Q9NRN7	309 aa		18.7	■□□□□ 0.58
DDR1-233	ENST00000421124	CHKB	Q9Y259	395 aa		18.7	■□□□□ 0.58
DDR1-233	ENST00000421124	TMEM131	Q92545	1883 aa		18.69	■□□□□ 0.58
DDR1-233	ENST00000421124	LNP1	A1A4G5	178 aa		18.69	■□□□□ 0.58
DDR1-233	ENST00000421124	KCNN4	O15554	427 aa		18.69	■□□□□ 0.58
DDR1-233	ENST00000421124	MMP20	O60882	483 aa		18.69	■□□□□ 0.58
DDR1-233	ENST00000421124	STK10	O94804	968 aa	Known RBP	18.69	■□□□□ 0.58
DDR1-233	ENST00000421124	PDHA1	P08559	390 aa		18.69	■□□□□ 0.58
DDR1-233	ENST00000421124	NFKB1	P19838	968 aa		18.69	■□□□□ 0.58
DDR1-233	ENST00000421124	HNRNPA2B1	P22626	353 aa	Known RBP	18.69	■□□□□ 0.58
DDR1-233	ENST00000421124	AKT2	P31751	481 aa		18.69	■□□□□ 0.58
DDR1-233	ENST00000421124	CXCR5	P32302	372 aa		18.69	■□□□□ 0.58
DDR1-233	ENST00000421124	CD68	P34810	354 aa	Predicted RBP	18.69	■□□□□ 0.58
DDR1-233	ENST00000421124	SGCG	Q13326	291 aa		18.69	■□□□□ 0.58
DDR1-233	ENST00000421124	SLC14A2	Q15849	920 aa		18.69	■□□□□ 0.58
DDR1-233	ENST00000421124	DPPA4	Q7L190	304 aa		18.69	■□□□□ 0.58
DDR1-233	ENST00000421124	ADAT2	Q7Z6V5	191 aa	Known RBP	18.69	■□□□□ 0.58
DDR1-233	ENST00000421124	NDUFAF2	Q8N183	169 aa		18.69	■□□□□ 0.58
DDR1-233	ENST00000421124	SLC35B2	Q8TB61	432 aa		18.69	■□□□□ 0.58
DDR1-233	ENST00000421124	PIH1D2	Q8WWB5	315 aa		18.69	■□□□□ 0.58
DDR1-233	ENST00000421124	ASB12	Q8WXK4	309 aa		18.69	■□□□□ 0.58
DDR1-233	ENST00000421124	FRMD8P1	Q9BZ68	369 aa	Predicted RBP	18.69	■□□□□ 0.58
DDR1-233	ENST00000421124	PCDH9	Q9HC56	1237 aa		18.69	■□□□□ 0.58
DDR1-233	ENST00000421124	PPIL1	Q9Y3C6	166 aa		18.69	■□□□□ 0.58
DDR1-233	ENST00000421124	WNT9A	O14904	365 aa		18.68	■□□□□ 0.58
DDR1-233	ENST00000421124	CEP104	O60308	925 aa		18.68	■□□□□ 0.58
DDR1-233	ENST00000421124	TM7SF2	O76062	418 aa		18.68	■□□□□ 0.58
DDR1-233	ENST00000421124	PAK4	O96013	591 aa	Predicted RBP	18.68	■□□□□ 0.58
DDR1-233	ENST00000421124	SYP	P08247	313 aa		18.68	■□□□□ 0.58
DDR1-233	ENST00000421124	ENG	P17813	658 aa		18.68	■□□□□ 0.58
DDR1-233	ENST00000421124	CD38	P28907	300 aa		18.68	■□□□□ 0.58
DDR1-233	ENST00000421124	CSNK1E	P49674	416 aa	Known RBP	18.68	■□□□□ 0.58
DDR1-233	ENST00000421124	EPHB1	P54762	984 aa		18.68	■□□□□ 0.58
DDR1-233	ENST00000421124	RPL26	P61254	145 aa	Known RBP	18.68	■□□□□ 0.58
DDR1-233	ENST00000421124	SEMG2	Q02383	582 aa		18.68	■□□□□ 0.58
DDR1-233	ENST00000421124	LMNB2	Q03252	620 aa		18.68	■□□□□ 0.58
DDR1-233	ENST00000421124	RALGDS	Q12967	914 aa		18.68	■□□□□ 0.58
DDR1-233	ENST00000421124	FGL2	Q14314	439 aa		18.68	■□□□□ 0.58
DDR1-233	ENST00000421124	STAT4	Q14765	748 aa		18.68	■□□□□ 0.58
DDR1-233	ENST00000421124	USP45	Q70EL2	814 aa		18.68	■□□□□ 0.58
DDR1-233	ENST00000421124	SPATA22	Q8NHS9	363 aa		18.68	■□□□□ 0.58
DDR1-233	ENST00000421124	MAIP1	Q8WWC4	291 aa		18.68	■□□□□ 0.58
DDR1-233	ENST00000421124	TADA1	Q96BN2	335 aa		18.68	■□□□□ 0.58
DDR1-233	ENST00000421124	SCRN2	Q96FV2	425 aa		18.68	■□□□□ 0.58

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