RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 NPHS1O60500 1241 aa7.11□□□□□ -1.27
HMGN1-205ENST00000419378 SYNCRIPO60506 623 aaKnown RBP7.11□□□□□ -1.27
HMGN1-205ENST00000419378 ADCY5O95622 1261 aa7.11□□□□□ -1.27
HMGN1-205ENST00000419378 CAVIN2O95810 425 aa7.11□□□□□ -1.27
HMGN1-205ENST00000419378 SERPINC1P01008 464 aa7.11□□□□□ -1.27
HMGN1-205ENST00000419378 DLDP09622 509 aaKnown RBP7.11□□□□□ -1.27
HMGN1-205ENST00000419378 HLA-EP13747 358 aa7.11□□□□□ -1.27
HMGN1-205ENST00000419378 POLR2EP19388 210 aaKnown RBP7.11□□□□□ -1.27
HMGN1-205ENST00000419378 RDXP35241 583 aaKnown RBP7.11□□□□□ -1.27
HMGN1-205ENST00000419378 MPLP40238 635 aa7.11□□□□□ -1.27
HMGN1-205ENST00000419378 CSKP41240 450 aa7.11□□□□□ -1.27
HMGN1-205ENST00000419378 KIR2DL2P43627 348 aaPredicted RBP7.11□□□□□ -1.27
HMGN1-205ENST00000419378 IRAK1P51617 712 aa7.11□□□□□ -1.27
HMGN1-205ENST00000419378 ATXN1P54253 815 aaKnown RBP7.11□□□□□ -1.27
HMGN1-205ENST00000419378 GSCP56915 257 aaPredicted RBP7.11□□□□□ -1.27
HMGN1-205ENST00000419378 CREB5Q02930 508 aa7.11□□□□□ -1.27
HMGN1-205ENST00000419378 DEUP1Q05D60 604 aa7.11□□□□□ -1.27
HMGN1-205ENST00000419378 MTA1Q13330 715 aa7.11□□□□□ -1.27
HMGN1-205ENST00000419378 BYSLQ13895 437 aaKnown RBP7.11□□□□□ -1.27
HMGN1-205ENST00000419378 PLCL1Q15111 1095 aa7.11□□□□□ -1.27
HMGN1-205ENST00000419378 CCDC6Q16204 474 aa7.11□□□□□ -1.27
HMGN1-205ENST00000419378 CSRP2Q16527 193 aa7.11□□□□□ -1.27
HMGN1-205ENST00000419378 SKOR2Q2VWA4 1001 aaPredicted RBP7.11□□□□□ -1.27
HMGN1-205ENST00000419378 PITRM1Q5JRX3 1037 aa7.11□□□□□ -1.27
HMGN1-205ENST00000419378 BRMS1LQ5PSV4 323 aa7.11□□□□□ -1.27
HMGN1-205ENST00000419378 CXorf57Q6NSI4 855 aaKnown RBP7.11□□□□□ -1.27
HMGN1-205ENST00000419378 FBXL22Q6P050 247 aa7.11□□□□□ -1.27
HMGN1-205ENST00000419378 KIAA1324Q6UXG2 1013 aaKnown RBP7.11□□□□□ -1.27
HMGN1-205ENST00000419378 CEP128Q6ZU80 1094 aa7.11□□□□□ -1.27
HMGN1-205ENST00000419378 MON1BQ7L1V2 547 aa7.11□□□□□ -1.27
HMGN1-205ENST00000419378 ARCQ7LC44 396 aa7.11□□□□□ -1.27
HMGN1-205ENST00000419378 IRF2BP2Q7Z5L9 587 aa7.11□□□□□ -1.27
HMGN1-205ENST00000419378 PHLDB2Q86SQ0 1253 aa7.11□□□□□ -1.27
HMGN1-205ENST00000419378 SLCO6A1Q86UG4 719 aa7.11□□□□□ -1.27
HMGN1-205ENST00000419378 CIR1Q86X95 450 aaPredicted RBP7.11□□□□□ -1.27
HMGN1-205ENST00000419378 CCDC117Q8IWD4 279 aaPredicted RBP7.11□□□□□ -1.27
HMGN1-205ENST00000419378 CCAR2Q8N163 923 aaKnown RBP7.11□□□□□ -1.27
HMGN1-205ENST00000419378 EMC1Q8N766 993 aa7.11□□□□□ -1.27
HMGN1-205ENST00000419378 ZNF366Q8N895 744 aa7.11□□□□□ -1.27
HMGN1-205ENST00000419378 JOSD2Q8TAC2 188 aa7.11□□□□□ -1.27
HMGN1-205ENST00000419378 IGSF8Q969P0 613 aa7.11□□□□□ -1.27
HMGN1-205ENST00000419378 TTC17Q96AE7 1141 aa7.11□□□□□ -1.27
HMGN1-205ENST00000419378 NAP1L5Q96NT1 182 aaPredicted RBP7.11□□□□□ -1.27
HMGN1-205ENST00000419378 RPRD1AQ96P16 312 aaPredicted RBP7.11□□□□□ -1.27
HMGN1-205ENST00000419378 SYT11Q9BT88 431 aa7.11□□□□□ -1.27
HMGN1-205ENST00000419378 TTYH3Q9C0H2 523 aa7.11□□□□□ -1.27
HMGN1-205ENST00000419378 WDCPQ9H6R7 721 aa7.11□□□□□ -1.27
HMGN1-205ENST00000419378 CD93Q9NPY3 652 aa7.11□□□□□ -1.27
HMGN1-205ENST00000419378 SEMA4GQ9NTN9 838 aa7.11□□□□□ -1.27
HMGN1-205ENST00000419378 SEPT11Q9NVA2 429 aaKnown RBP7.11□□□□□ -1.27
HMGN1-205ENST00000419378 INTS7Q9NVH2 962 aaKnown RBP7.11□□□□□ -1.27
HMGN1-205ENST00000419378 ARHGEF38Q9NXL2 777 aa7.11□□□□□ -1.27
HMGN1-205ENST00000419378 ADAM22Q9P0K1 906 aa7.11□□□□□ -1.27
HMGN1-205ENST00000419378 ADAMTS6Q9UKP5 1117 aa7.11□□□□□ -1.27
HMGN1-205ENST00000419378 VANGL2Q9ULK5 521 aa7.11□□□□□ -1.27
HMGN1-205ENST00000419378 MYO6Q9UM54 1294 aa7.11□□□□□ -1.27
HMGN1-205ENST00000419378 PAXBP1Q9Y5B6 917 aa7.11□□□□□ -1.27
HMGN1-205ENST00000419378 PCDHGA5Q9Y5G8 931 aa7.11□□□□□ -1.27
HMGN1-205ENST00000419378 HS3ST4Q9Y661 456 aa7.11□□□□□ -1.27
HMGN1-205ENST00000419378 TNRC6BQ9UPQ9 1833 aaKnown RBP7.11□□□□□ -1.27
HMGN1-205ENST00000419378 RALGAPA1Q6GYQ0 2036 aa7.1□□□□□ -1.27
HMGN1-205ENST00000419378 THADAQ6YHU6 1953 aa7.1□□□□□ -1.27
HMGN1-205ENST00000419378 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.1□□□□□ -1.27
HMGN1-205ENST00000419378 IGHV1OR15-9A0A0B4J2B8 117 aa7.1□□□□□ -1.27
HMGN1-205ENST00000419378 BCLAF3A2AJT9 711 aaKnown RBP7.1□□□□□ -1.27
HMGN1-205ENST00000419378 C2CD4BA6NLJ0 364 aa7.1□□□□□ -1.27
HMGN1-205ENST00000419378 GOLGA6L19H0YKK7 550 aa7.1□□□□□ -1.27
HMGN1-205ENST00000419378 ZNF217O75362 1048 aa7.1□□□□□ -1.27
HMGN1-205ENST00000419378 MOCS3O95396 460 aa7.1□□□□□ -1.27
HMGN1-205ENST00000419378 WNT11O96014 354 aa7.1□□□□□ -1.27
HMGN1-205ENST00000419378 F9P00740 461 aa7.1□□□□□ -1.27
HMGN1-205ENST00000419378 ASLP04424 464 aa7.1□□□□□ -1.27
HMGN1-205ENST00000419378 CALB1P05937 261 aa7.1□□□□□ -1.27
HMGN1-205ENST00000419378 ATP5BP06576 529 aaKnown RBP7.1□□□□□ -1.27
HMGN1-205ENST00000419378 CCDC172P0C7W6 258 aa7.1□□□□□ -1.27
HMGN1-205ENST00000419378 PDGFRAP16234 1089 aa7.1□□□□□ -1.27
HMGN1-205ENST00000419378 SDC4P31431 198 aa7.1□□□□□ -1.27
HMGN1-205ENST00000419378 BCL6P41182 706 aa7.1□□□□□ -1.27
HMGN1-205ENST00000419378 PTPN9P43378 593 aa7.1□□□□□ -1.27
HMGN1-205ENST00000419378 DHPSP49366 369 aaPredicted RBP7.1□□□□□ -1.27
HMGN1-205ENST00000419378 COPAP53621 1224 aa7.1□□□□□ -1.27
HMGN1-205ENST00000419378 RPL11P62913 178 aaKnown RBP7.1□□□□□ -1.27
HMGN1-205ENST00000419378 NR1I3Q14994 352 aa7.1□□□□□ -1.27
HMGN1-205ENST00000419378 SLC14A2Q15849 920 aa7.1□□□□□ -1.27
HMGN1-205ENST00000419378 ASIC2Q16515 512 aa7.1□□□□□ -1.27
HMGN1-205ENST00000419378 C15orf59Q2T9L4 293 aaPredicted RBP7.1□□□□□ -1.27
HMGN1-205ENST00000419378 PLEKHG6Q3KR16 790 aa7.1□□□□□ -1.27
HMGN1-205ENST00000419378 CCDC14Q49A88 953 aa7.1□□□□□ -1.27
HMGN1-205ENST00000419378 C5orf22Q49AR2 442 aa7.1□□□□□ -1.27
HMGN1-205ENST00000419378 SLC36A4Q6YBV0 504 aa7.1□□□□□ -1.27
HMGN1-205ENST00000419378 LPCAT2Q7L5N7 544 aa7.1□□□□□ -1.27
HMGN1-205ENST00000419378 C14orf80Q86SX3 495 aa7.1□□□□□ -1.27
HMGN1-205ENST00000419378 FAM131BQ86XD5 332 aa7.1□□□□□ -1.27
HMGN1-205ENST00000419378 CACUL1Q86Y37 369 aa7.1□□□□□ -1.27
HMGN1-205ENST00000419378 THNSL2Q86YJ6 484 aa7.1□□□□□ -1.27
HMGN1-205ENST00000419378 TP53INP2Q8IXH6 220 aa7.1□□□□□ -1.27
HMGN1-205ENST00000419378 TMEFF1Q8IYR6 380 aa7.1□□□□□ -1.27
HMGN1-205ENST00000419378 ZNF683Q8IZ20 524 aa7.1□□□□□ -1.27
HMGN1-205ENST00000419378 APCDD1Q8J025 514 aa7.1□□□□□ -1.27
HMGN1-205ENST00000419378 ANKS4BQ8N8V4 417 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms