RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 NIPA2Q8N8Q9 360 aa15.22■□□□□ 0.03
UBXN4-203ENST00000416538 FAM181AQ8N9Y4 354 aa15.22■□□□□ 0.03
UBXN4-203ENST00000416538 LMX1AQ8TE12 382 aa15.22■□□□□ 0.03
UBXN4-203ENST00000416538 SYN2Q92777 582 aaPredicted RBP15.22■□□□□ 0.03
UBXN4-203ENST00000416538 NXPE2Q96DL1 559 aa15.22■□□□□ 0.03
UBXN4-203ENST00000416538 TUBGCP5Q96RT8 1024 aa15.22■□□□□ 0.03
UBXN4-203ENST00000416538 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.22■□□□□ 0.03
UBXN4-203ENST00000416538 NUP85Q9BW27 656 aa15.22■□□□□ 0.03
UBXN4-203ENST00000416538 CINPQ9BW66 212 aaPredicted RBP15.22■□□□□ 0.03
UBXN4-203ENST00000416538 CLPBQ9H078 707 aa15.22■□□□□ 0.03
UBXN4-203ENST00000416538 PCDH18Q9HCL0 1135 aa15.22■□□□□ 0.03
UBXN4-203ENST00000416538 APOBEC3BQ9UH17 382 aaKnown RBP15.22■□□□□ 0.03
UBXN4-203ENST00000416538 ANAPC7Q9UJX3 599 aa15.22■□□□□ 0.03
UBXN4-203ENST00000416538 CAPN11Q9UMQ6 739 aa15.22■□□□□ 0.03
UBXN4-203ENST00000416538 CLCA2Q9UQC9 943 aa15.22■□□□□ 0.03
UBXN4-203ENST00000416538 LOC400499M0QZD8 3231 aa15.22■□□□□ 0.03
UBXN4-203ENST00000416538 H3BRJ5 948 aa15.21■□□□□ 0.03
UBXN4-203ENST00000416538 DAPK3O43293 454 aa15.21■□□□□ 0.03
UBXN4-203ENST00000416538 SERPING1P05155 500 aa15.21■□□□□ 0.03
UBXN4-203ENST00000416538 CD48P09326 243 aa15.21■□□□□ 0.03
UBXN4-203ENST00000416538 CDK4P11802 303 aa15.21■□□□□ 0.03
UBXN4-203ENST00000416538 CR2P20023 1033 aa15.21■□□□□ 0.03
UBXN4-203ENST00000416538 EIF4A3P38919 411 aaKnown RBP15.21■□□□□ 0.03
UBXN4-203ENST00000416538 LIG3P49916 1009 aa15.21■□□□□ 0.03
UBXN4-203ENST00000416538 THOP1P52888 689 aa15.21■□□□□ 0.03
UBXN4-203ENST00000416538 ELP6Q0PNE2 266 aa15.21■□□□□ 0.03
UBXN4-203ENST00000416538 MMRN1Q13201 1228 aa15.21■□□□□ 0.03
UBXN4-203ENST00000416538 RTP5Q14D33 572 aa15.21■□□□□ 0.03
UBXN4-203ENST00000416538 TCEA2Q15560 299 aa15.21■□□□□ 0.03
UBXN4-203ENST00000416538 CDKN3Q16667 212 aa15.21■□□□□ 0.03
UBXN4-203ENST00000416538 ALG11Q2TAA5 492 aa15.21■□□□□ 0.03
UBXN4-203ENST00000416538 TMCO4Q5TGY1 634 aa15.21■□□□□ 0.03
UBXN4-203ENST00000416538 BRAT1Q6PJG6 821 aa15.21■□□□□ 0.03
UBXN4-203ENST00000416538 PLA2G15Q8NCC3 412 aa15.21■□□□□ 0.03
UBXN4-203ENST00000416538 PDXPQ96GD0 296 aa15.21■□□□□ 0.03
UBXN4-203ENST00000416538 ZNF641Q96N77 438 aaPredicted RBP15.21■□□□□ 0.03
UBXN4-203ENST00000416538 PSKH2Q96QS6 385 aa15.21■□□□□ 0.03
UBXN4-203ENST00000416538 PACSIN1Q9BY11 444 aa15.21■□□□□ 0.03
UBXN4-203ENST00000416538 XPO4Q9C0E2 1151 aaKnown RBP15.21■□□□□ 0.03
UBXN4-203ENST00000416538 MRPL47Q9HD33 250 aaKnown RBP15.21■□□□□ 0.03
UBXN4-203ENST00000416538 SCUBE2Q9NQ36 999 aa15.21■□□□□ 0.03
UBXN4-203ENST00000416538 UNC13CQ8NB66 2214 aa15.21■□□□□ 0.03
UBXN4-203ENST00000416538 H3BM21 787 aa15.2■□□□□ 0.02
UBXN4-203ENST00000416538 MFSD11O43934 449 aa15.2■□□□□ 0.02
UBXN4-203ENST00000416538 OPA1O60313 960 aa15.2■□□□□ 0.02
UBXN4-203ENST00000416538 MAFKO60675 156 aa15.2■□□□□ 0.02
UBXN4-203ENST00000416538 MT-CO3P00414 261 aa15.2■□□□□ 0.02
UBXN4-203ENST00000416538 PCCBP05166 539 aa15.2■□□□□ 0.02
UBXN4-203ENST00000416538 XPAP23025 273 aaPredicted RBP15.2■□□□□ 0.02
UBXN4-203ENST00000416538 IL4RP24394 825 aa15.2■□□□□ 0.02
UBXN4-203ENST00000416538 CASP14P31944 242 aa15.2■□□□□ 0.02
UBXN4-203ENST00000416538 SUOXP51687 545 aa15.2■□□□□ 0.02
UBXN4-203ENST00000416538 ARSEP51690 589 aa15.2■□□□□ 0.02
UBXN4-203ENST00000416538 ZNF135P52742 658 aaPredicted RBP15.2■□□□□ 0.02
UBXN4-203ENST00000416538 LBRQ14739 615 aaKnown RBP15.2■□□□□ 0.02
UBXN4-203ENST00000416538 GRM3Q14832 879 aa15.2■□□□□ 0.02
UBXN4-203ENST00000416538 AGERQ15109 404 aa15.2■□□□□ 0.02
UBXN4-203ENST00000416538 PRRT3Q5FWE3 981 aa15.2■□□□□ 0.02
UBXN4-203ENST00000416538 PERM1Q5SV97 790 aa15.2■□□□□ 0.02
UBXN4-203ENST00000416538 ZCCHC8Q6NZY4 707 aaKnown RBP15.2■□□□□ 0.02
UBXN4-203ENST00000416538 CRTC1Q6UUV9 634 aa15.2■□□□□ 0.02
UBXN4-203ENST00000416538 SLC35F3Q8IY50 421 aa15.2■□□□□ 0.02
UBXN4-203ENST00000416538 IFI44Q8TCB0 444 aa15.2■□□□□ 0.02
UBXN4-203ENST00000416538 HCAR2Q8TDS4 363 aa15.2■□□□□ 0.02
UBXN4-203ENST00000416538 HNRNPLLQ8WVV9 542 aaKnown RBP15.2■□□□□ 0.02
UBXN4-203ENST00000416538 TEKT4Q8WW24 435 aa15.2■□□□□ 0.02
UBXN4-203ENST00000416538 BOCQ9BWV1 1114 aa15.2■□□□□ 0.02
UBXN4-203ENST00000416538 ATP13A3Q9H7F0 1226 aa15.2■□□□□ 0.02
UBXN4-203ENST00000416538 DONSONQ9NYP3 566 aa15.2■□□□□ 0.02
UBXN4-203ENST00000416538 OR1A2Q9Y585 309 aa15.2■□□□□ 0.02
UBXN4-203ENST00000416538 CSNK1G3Q9Y6M4 447 aa15.2■□□□□ 0.02
UBXN4-203ENST00000416538 A0A087WV48 116 aa15.19■□□□□ 0.02
UBXN4-203ENST00000416538 A0A1W2PNU3 283 aaPredicted RBP15.19■□□□□ 0.02
UBXN4-203ENST00000416538 NEMP2A6NFY4 417 aa15.19■□□□□ 0.02
UBXN4-203ENST00000416538 BRINP1O60477 761 aa15.19■□□□□ 0.02
UBXN4-203ENST00000416538 ALPPL2P10696 532 aa15.19■□□□□ 0.02
UBXN4-203ENST00000416538 TSHRP16473 764 aa15.19■□□□□ 0.02
UBXN4-203ENST00000416538 TGM2P21980 687 aa15.19■□□□□ 0.02
UBXN4-203ENST00000416538 SERPINA4P29622 427 aa15.19■□□□□ 0.02
UBXN4-203ENST00000416538 ARL4AP40617 200 aa15.19■□□□□ 0.02
UBXN4-203ENST00000416538 SCNN1BP51168 640 aa15.19■□□□□ 0.02
UBXN4-203ENST00000416538 MAXP61244 160 aa15.19■□□□□ 0.02
UBXN4-203ENST00000416538 YPEL5P62699 121 aa15.19■□□□□ 0.02
UBXN4-203ENST00000416538 TRAF2Q12933 501 aa15.19■□□□□ 0.02
UBXN4-203ENST00000416538 PIGHQ14442 188 aaPredicted RBP15.19■□□□□ 0.02
UBXN4-203ENST00000416538 IHHQ14623 411 aa15.19■□□□□ 0.02
UBXN4-203ENST00000416538 RFTN1Q14699 578 aaPredicted RBP15.19■□□□□ 0.02
UBXN4-203ENST00000416538 NFATC4Q14934 902 aa15.19■□□□□ 0.02
UBXN4-203ENST00000416538 ACAP1Q15027 740 aa15.19■□□□□ 0.02
UBXN4-203ENST00000416538 LRRC14Q15048 493 aa15.19■□□□□ 0.02
UBXN4-203ENST00000416538 PTPRRQ15256 657 aa15.19■□□□□ 0.02
UBXN4-203ENST00000416538 ATP13A4Q4VNC1 1196 aa15.19■□□□□ 0.02
UBXN4-203ENST00000416538 ALKBH5Q6P6C2 394 aaKnown RBP15.19■□□□□ 0.02
UBXN4-203ENST00000416538 TMCO3Q6UWJ1 677 aa15.19■□□□□ 0.02
UBXN4-203ENST00000416538 LIPIQ6XZB0 460 aa15.19■□□□□ 0.02
UBXN4-203ENST00000416538 DPPA4Q7L190 304 aa15.19■□□□□ 0.02
UBXN4-203ENST00000416538 CACTIN-AS1Q8N1I8 211 aa15.19■□□□□ 0.02
UBXN4-203ENST00000416538 FAM71BQ8TC56 605 aa15.19■□□□□ 0.02
UBXN4-203ENST00000416538 TSACCQ96A04 125 aaPredicted RBP15.19■□□□□ 0.02
UBXN4-203ENST00000416538 MGME1Q9BQP7 344 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms