RNA–Protein interactions for RNA: ENST00000415609.6

UBA3-203, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 5 BASIC

Gene UBA3, Length 2,004 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-203ENST00000415609 DUSP4Q13115 394 aa12.44□□□□□ -0.42
UBA3-203ENST00000415609 MSLNQ13421 630 aaPredicted RBP12.44□□□□□ -0.42
UBA3-203ENST00000415609 RTP2Q5QGT7 225 aa12.44□□□□□ -0.42
UBA3-203ENST00000415609 PPM1LQ5SGD2 360 aa12.44□□□□□ -0.42
UBA3-203ENST00000415609 TMEM198Q66K66 360 aa12.44□□□□□ -0.42
UBA3-203ENST00000415609 NADSYN1Q6IA69 706 aa12.44□□□□□ -0.42
UBA3-203ENST00000415609 PGM2L1Q6PCE3 622 aa12.44□□□□□ -0.42
UBA3-203ENST00000415609 AAGABQ6PD74 315 aa12.44□□□□□ -0.42
UBA3-203ENST00000415609 HPS6Q86YV9 775 aa12.44□□□□□ -0.42
UBA3-203ENST00000415609 LGI2Q8N0V4 545 aa12.44□□□□□ -0.42
UBA3-203ENST00000415609 DBF4BQ8NFT6 615 aa12.44□□□□□ -0.42
UBA3-203ENST00000415609 CD99L2Q8TCZ2 262 aa12.44□□□□□ -0.42
UBA3-203ENST00000415609 BLOC1S5Q8TDH9 187 aa12.44□□□□□ -0.42
UBA3-203ENST00000415609 MICAL1Q8TDZ2 1067 aa12.44□□□□□ -0.42
UBA3-203ENST00000415609 SLC26A7Q8TE54 656 aa12.44□□□□□ -0.42
UBA3-203ENST00000415609 PYDC1Q8WXC3 89 aa12.44□□□□□ -0.42
UBA3-203ENST00000415609 SPATA17Q96L03 361 aa12.44□□□□□ -0.42
UBA3-203ENST00000415609 MARK4Q96L34 752 aa12.44□□□□□ -0.42
UBA3-203ENST00000415609 CASD1Q96PB1 797 aa12.44□□□□□ -0.42
UBA3-203ENST00000415609 ZNF184Q99676 751 aaPredicted RBP12.44□□□□□ -0.42
UBA3-203ENST00000415609 TSEN34Q9BSV6 310 aaKnown RBP12.44□□□□□ -0.42
UBA3-203ENST00000415609 CCDC28BQ9BUN5 200 aa12.44□□□□□ -0.42
UBA3-203ENST00000415609 MFSD1Q9H3U5 465 aa12.44□□□□□ -0.42
UBA3-203ENST00000415609 S100A14Q9HCY8 104 aa12.44□□□□□ -0.42
UBA3-203ENST00000415609 LRCH1Q9Y2L9 728 aa12.44□□□□□ -0.42
UBA3-203ENST00000415609 FIS1Q9Y3D6 152 aa12.44□□□□□ -0.42
UBA3-203ENST00000415609 KCTD3Q9Y597 815 aa12.44□□□□□ -0.42
UBA3-203ENST00000415609 RGSL1A5PLK6 1076 aa12.43□□□□□ -0.42
UBA3-203ENST00000415609 TRPC5OSA6NMA1 111 aa12.43□□□□□ -0.42
UBA3-203ENST00000415609 F5H5T6 163 aa12.43□□□□□ -0.42
UBA3-203ENST00000415609 ENPP3O14638 875 aa12.43□□□□□ -0.42
UBA3-203ENST00000415609 PRAMEF11O60813 436 aa12.43□□□□□ -0.42
UBA3-203ENST00000415609 NBNO60934 754 aa12.43□□□□□ -0.42
UBA3-203ENST00000415609 VNN2O95498 520 aa12.43□□□□□ -0.42
UBA3-203ENST00000415609 HNRNPLP14866 589 aaKnown RBP eCLIP12.43□□□□□ -0.42
UBA3-203ENST00000415609 CD1EP15812 388 aa12.43□□□□□ -0.42
UBA3-203ENST00000415609 HOXD10P28358 340 aa12.43□□□□□ -0.42
UBA3-203ENST00000415609 KCNQ1P51787 676 aa12.43□□□□□ -0.42
UBA3-203ENST00000415609 YBEYP58557 167 aaPredicted RBP12.43□□□□□ -0.42
UBA3-203ENST00000415609 PFKPQ01813 784 aa12.43□□□□□ -0.42
UBA3-203ENST00000415609 RING1Q06587 406 aa12.43□□□□□ -0.42
UBA3-203ENST00000415609 TNK2Q07912 1038 aa12.43□□□□□ -0.42
UBA3-203ENST00000415609 CCNIQ14094 377 aa12.43□□□□□ -0.42
UBA3-203ENST00000415609 ACBD5Q5T8D3 534 aaPredicted RBP12.43□□□□□ -0.42
UBA3-203ENST00000415609 KBTBD2Q8IY47 623 aa12.43□□□□□ -0.42
UBA3-203ENST00000415609 CFAP52Q8N1V2 620 aa12.43□□□□□ -0.42
UBA3-203ENST00000415609 FBXW8Q8N3Y1 598 aa12.43□□□□□ -0.42
UBA3-203ENST00000415609 KDM1BQ8NB78 822 aa12.43□□□□□ -0.42
UBA3-203ENST00000415609 HIPK4Q8NE63 616 aa12.43□□□□□ -0.42
UBA3-203ENST00000415609 JADE3Q92613 823 aa12.43□□□□□ -0.42
UBA3-203ENST00000415609 TADA1Q96BN2 335 aa12.43□□□□□ -0.42
UBA3-203ENST00000415609 CCDC126Q96EE4 140 aa12.43□□□□□ -0.42
UBA3-203ENST00000415609 ELAC1Q9H777 363 aaKnown RBP12.43□□□□□ -0.42
UBA3-203ENST00000415609 MARCH4Q9P2E8 410 aaPredicted RBP12.43□□□□□ -0.42
UBA3-203ENST00000415609 POMPQ9Y244 141 aa12.43□□□□□ -0.42
UBA3-203ENST00000415609 VWA7Q9Y334 891 aa12.43□□□□□ -0.42
UBA3-203ENST00000415609 LOC285095A0A1B0GVY8 99 aa12.42□□□□□ -0.42
UBA3-203ENST00000415609 A8MT66 165 aa12.42□□□□□ -0.42
UBA3-203ENST00000415609 H7C4K7 107 aa12.42□□□□□ -0.42
UBA3-203ENST00000415609 MUSKO15146 869 aa12.42□□□□□ -0.42
UBA3-203ENST00000415609 LDB2O43679 373 aa12.42□□□□□ -0.42
UBA3-203ENST00000415609 BUD23O43709 281 aaKnown RBP12.42□□□□□ -0.42
UBA3-203ENST00000415609 RBP1P09455 135 aa12.42□□□□□ -0.42
UBA3-203ENST00000415609 PLK1P53350 603 aa12.42□□□□□ -0.42
UBA3-203ENST00000415609 CDKN2DP55273 166 aa12.42□□□□□ -0.42
UBA3-203ENST00000415609 KLC1Q07866 573 aa12.42□□□□□ -0.42
UBA3-203ENST00000415609 CYLC2Q14093 348 aaPredicted RBP12.42□□□□□ -0.42
UBA3-203ENST00000415609 GALNT3Q14435 633 aa12.42□□□□□ -0.42
UBA3-203ENST00000415609 C16orf89Q6UX73 402 aa12.42□□□□□ -0.42
UBA3-203ENST00000415609 GALNT7Q86SF2 657 aa12.42□□□□□ -0.42
UBA3-203ENST00000415609 SETD3Q86TU7 594 aaPredicted RBP12.42□□□□□ -0.42
UBA3-203ENST00000415609 PLCD3Q8N3E9 789 aa12.42□□□□□ -0.42
UBA3-203ENST00000415609 CPSF7Q8N684 471 aaKnown RBP12.42□□□□□ -0.42
UBA3-203ENST00000415609 SLC43A3Q8NBI5 491 aa12.42□□□□□ -0.42
UBA3-203ENST00000415609 RP9Q8TA86 221 aaKnown RBP12.42□□□□□ -0.42
UBA3-203ENST00000415609 STON2Q8WXE9 905 aa12.42□□□□□ -0.42
UBA3-203ENST00000415609 MIEF2Q96C03 454 aa12.42□□□□□ -0.42
UBA3-203ENST00000415609 NACA2Q9H009 215 aa12.42□□□□□ -0.42
UBA3-203ENST00000415609 SUDS3Q9H7L9 328 aaPredicted RBP12.42□□□□□ -0.42
UBA3-203ENST00000415609 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.42□□□□□ -0.42
UBA3-203ENST00000415609 ARL5AQ9Y689 179 aa12.42□□□□□ -0.42
UBA3-203ENST00000415609 SLC38A8A6NNN8 435 aa12.42□□□□□ -0.42
UBA3-203ENST00000415609 ARVCFO00192 962 aa12.42□□□□□ -0.42
UBA3-203ENST00000415609 SLC22A2O15244 555 aa12.42□□□□□ -0.42
UBA3-203ENST00000415609 SKAP2O75563 359 aaPredicted RBP12.42□□□□□ -0.42
UBA3-203ENST00000415609 SMNDC1O75940 238 aaKnown RBP eCLIP12.42□□□□□ -0.42
UBA3-203ENST00000415609 IPO13O94829 963 aaKnown RBP12.42□□□□□ -0.42
UBA3-203ENST00000415609 SNUPNO95149 360 aaKnown RBP12.42□□□□□ -0.42
UBA3-203ENST00000415609 S1PR4O95977 384 aa12.42□□□□□ -0.42
UBA3-203ENST00000415609 SLC4A1P02730 911 aa12.42□□□□□ -0.42
UBA3-203ENST00000415609 FGF1P05230 155 aa12.42□□□□□ -0.42
UBA3-203ENST00000415609 HLA-DPA1P20036 260 aa12.42□□□□□ -0.42
UBA3-203ENST00000415609 KCNA5P22460 613 aa12.42□□□□□ -0.42
UBA3-203ENST00000415609 KPNA1P52294 538 aaPredicted RBP12.42□□□□□ -0.42
UBA3-203ENST00000415609 MTTPP55157 894 aa12.42□□□□□ -0.42
UBA3-203ENST00000415609 ELAVL2Q12926 359 aaKnown RBP12.42□□□□□ -0.42
UBA3-203ENST00000415609 PRSS55Q6UWB4 352 aaPredicted RBP12.42□□□□□ -0.42
UBA3-203ENST00000415609 IZUMO2Q6UXV1 221 aa12.42□□□□□ -0.42
UBA3-203ENST00000415609 PIM3Q86V86 326 aa12.42□□□□□ -0.42
UBA3-203ENST00000415609 AFAP1L2Q8N4X5 818 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms