RNA–Protein interactions for RNA: ENST00000415469.5

LINC00858-201, long intergenic non-protein coding RNA 858, humanhuman

TSL 2 BASIC

Gene LINC00858, Length 2,685 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00858-201ENST00000415469 VPS45Q9NRW7 570 aa9.39□□□□□ -0.91
LINC00858-201ENST00000415469 ANKRD6Q9Y2G4 727 aa9.39□□□□□ -0.91
LINC00858-201ENST00000415469 RAP2CQ9Y3L5 183 aa9.39□□□□□ -0.91
LINC00858-201ENST00000415469 PTGDR2Q9Y5Y4 395 aa9.39□□□□□ -0.91
LINC00858-201ENST00000415469 C5orf42Q9H799 3197 aa9.39□□□□□ -0.91
LINC00858-201ENST00000415469 IGLV3-10A0A075B6K4 115 aa9.39□□□□□ -0.91
LINC00858-201ENST00000415469 CFLARO15519 480 aa9.39□□□□□ -0.91
LINC00858-201ENST00000415469 LDB2O43679 373 aa9.39□□□□□ -0.91
LINC00858-201ENST00000415469 SEC24AO95486 1093 aa9.39□□□□□ -0.91
LINC00858-201ENST00000415469 GOT2P00505 430 aaKnown RBP9.39□□□□□ -0.91
LINC00858-201ENST00000415469 SLC2A3P11169 496 aa9.39□□□□□ -0.91
LINC00858-201ENST00000415469 PIK3R1P27986 724 aa9.39□□□□□ -0.91
LINC00858-201ENST00000415469 CDKN1CP49918 316 aaPredicted RBP9.39□□□□□ -0.91
LINC00858-201ENST00000415469 PKNOX1P55347 436 aa9.39□□□□□ -0.91
LINC00858-201ENST00000415469 TBL3Q12788 808 aaKnown RBP9.39□□□□□ -0.91
LINC00858-201ENST00000415469 GPR17Q13304 367 aa9.39□□□□□ -0.91
LINC00858-201ENST00000415469 UGP2Q16851 508 aa9.39□□□□□ -0.91
LINC00858-201ENST00000415469 DNAL1Q4LDG9 190 aa9.39□□□□□ -0.91
LINC00858-201ENST00000415469 CILP2Q8IUL8 1156 aa9.39□□□□□ -0.91
LINC00858-201ENST00000415469 ARHGAP24Q8N264 748 aa9.39□□□□□ -0.91
LINC00858-201ENST00000415469 FBXO22Q8NEZ5 403 aa9.39□□□□□ -0.91
LINC00858-201ENST00000415469 SLC26A7Q8TE54 656 aa9.39□□□□□ -0.91
LINC00858-201ENST00000415469 SREK1Q8WXA9 508 aaKnown RBP9.39□□□□□ -0.91
LINC00858-201ENST00000415469 IFT43Q96FT9 208 aa9.39□□□□□ -0.91
LINC00858-201ENST00000415469 MRPL46Q9H2W6 279 aaKnown RBP9.39□□□□□ -0.91
LINC00858-201ENST00000415469 MMADHCQ9H3L0 296 aaPredicted RBP9.39□□□□□ -0.91
LINC00858-201ENST00000415469 HMX1Q9NP08 348 aaPredicted RBP9.39□□□□□ -0.91
LINC00858-201ENST00000415469 NSMCE4AQ9NXX6 385 aa9.39□□□□□ -0.91
LINC00858-201ENST00000415469 CDH22Q9UJ99 828 aa9.39□□□□□ -0.91
LINC00858-201ENST00000415469 SPO11Q9Y5K1 396 aa9.39□□□□□ -0.91
LINC00858-201ENST00000415469 ATP6AP2A0A1C7CYW4 349 aa9.38□□□□□ -0.91
LINC00858-201ENST00000415469 CCDC162PA2VCL2 907 aa9.38□□□□□ -0.91
LINC00858-201ENST00000415469 C2orf78A6NCI8 922 aa9.38□□□□□ -0.91
LINC00858-201ENST00000415469 A8MT66 165 aa9.38□□□□□ -0.91
LINC00858-201ENST00000415469 F5H5T6 163 aa9.38□□□□□ -0.91
LINC00858-201ENST00000415469 PPP6CO00743 305 aa9.38□□□□□ -0.91
LINC00858-201ENST00000415469 CLGNO14967 610 aa9.38□□□□□ -0.91
LINC00858-201ENST00000415469 HDAC3O15379 428 aa9.38□□□□□ -0.91
LINC00858-201ENST00000415469 ATP6AP2O75787 350 aa9.38□□□□□ -0.91
LINC00858-201ENST00000415469 KLKB1P03952 638 aa9.38□□□□□ -0.91
LINC00858-201ENST00000415469 ANPEPP15144 967 aa9.38□□□□□ -0.91
LINC00858-201ENST00000415469 MAGEA11P43364 429 aa9.38□□□□□ -0.91
LINC00858-201ENST00000415469 SCNN1BP51168 640 aa9.38□□□□□ -0.91
LINC00858-201ENST00000415469 NRG1Q02297 640 aaPredicted RBP9.38□□□□□ -0.91
LINC00858-201ENST00000415469 NOGQ13253 232 aa9.38□□□□□ -0.91
LINC00858-201ENST00000415469 CCNIQ14094 377 aa9.38□□□□□ -0.91
LINC00858-201ENST00000415469 TECRLQ5HYJ1 363 aa9.38□□□□□ -0.91
LINC00858-201ENST00000415469 ZNF549Q6P9A3 640 aa9.38□□□□□ -0.91
LINC00858-201ENST00000415469 RNF111Q6ZNA4 994 aa9.38□□□□□ -0.91
LINC00858-201ENST00000415469 NET1Q7Z628 596 aaPredicted RBP9.38□□□□□ -0.91
LINC00858-201ENST00000415469 ARHGAP18Q8N392 663 aa9.38□□□□□ -0.91
LINC00858-201ENST00000415469 PDCD6IPQ8WUM4 868 aaKnown RBP9.38□□□□□ -0.91
LINC00858-201ENST00000415469 RCN3Q96D15 328 aa9.38□□□□□ -0.91
LINC00858-201ENST00000415469 ZNF333Q96JL9 665 aa9.38□□□□□ -0.91
LINC00858-201ENST00000415469 SIKE1Q9BRV8 207 aa9.38□□□□□ -0.91
LINC00858-201ENST00000415469 TTPALQ9BTX7 342 aa9.38□□□□□ -0.91
LINC00858-201ENST00000415469 CXorf56Q9H5V9 222 aa9.38□□□□□ -0.91
LINC00858-201ENST00000415469 FAM96AQ9H5X1 160 aa9.38□□□□□ -0.91
LINC00858-201ENST00000415469 IL37Q9NZH6 218 aa9.38□□□□□ -0.91
LINC00858-201ENST00000415469 STOML1Q9UBI4 398 aa9.38□□□□□ -0.91
LINC00858-201ENST00000415469 GIMAP2Q9UG22 337 aa9.38□□□□□ -0.91
LINC00858-201ENST00000415469 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.38□□□□□ -0.91
LINC00858-201ENST00000415469 SQORQ9Y6N5 450 aa9.38□□□□□ -0.91
LINC00858-201ENST00000415469 FAM92AA1XBS5 289 aa9.38□□□□□ -0.91
LINC00858-201ENST00000415469 OR6C75A6NL08 312 aa9.38□□□□□ -0.91
LINC00858-201ENST00000415469 AP3B1O00203 1094 aa9.38□□□□□ -0.91
LINC00858-201ENST00000415469 S1PR4O95977 384 aa9.38□□□□□ -0.91
LINC00858-201ENST00000415469 IGLV3-27P01718 113 aa9.38□□□□□ -0.91
LINC00858-201ENST00000415469 TCN1P20061 433 aaPredicted RBP9.38□□□□□ -0.91
LINC00858-201ENST00000415469 DNAJB2P25686 324 aa9.38□□□□□ -0.91
LINC00858-201ENST00000415469 HOXD9P28356 352 aaPredicted RBP9.38□□□□□ -0.91
LINC00858-201ENST00000415469 HTR7P34969 479 aa9.38□□□□□ -0.91
LINC00858-201ENST00000415469 VHLP40337 213 aa9.38□□□□□ -0.91
LINC00858-201ENST00000415469 CCNG1P51959 295 aa9.38□□□□□ -0.91
LINC00858-201ENST00000415469 CDH13P55290 713 aa9.38□□□□□ -0.91
LINC00858-201ENST00000415469 C1QTNF8P60827 252 aa9.38□□□□□ -0.91
LINC00858-201ENST00000415469 ACTR3P61158 418 aa9.38□□□□□ -0.91
LINC00858-201ENST00000415469 NSUN2Q08J23 767 aaKnown RBP eCLIP9.38□□□□□ -0.91
LINC00858-201ENST00000415469 PLD1Q13393 1074 aa9.38□□□□□ -0.91
LINC00858-201ENST00000415469 GK5Q6ZS86 529 aa9.38□□□□□ -0.91
LINC00858-201ENST00000415469 FAM126BQ8IXS8 530 aa9.38□□□□□ -0.91
LINC00858-201ENST00000415469 FAM156AQ8NDB6 213 aa9.38□□□□□ -0.91
LINC00858-201ENST00000415469 PTERQ96BW5 349 aa9.38□□□□□ -0.91
LINC00858-201ENST00000415469 NPAS2Q99743 824 aa9.38□□□□□ -0.91
LINC00858-201ENST00000415469 GPBP1L1Q9HC44 474 aaPredicted RBP9.38□□□□□ -0.91
LINC00858-201ENST00000415469 BPIFA1Q9NP55 256 aa9.38□□□□□ -0.91
LINC00858-201ENST00000415469 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.38□□□□□ -0.91
LINC00858-201ENST00000415469 NCKIPSDQ9NZQ3 722 aa9.38□□□□□ -0.91
LINC00858-201ENST00000415469 UBA6A0AVT1 1052 aaPredicted RBP9.38□□□□□ -0.91
LINC00858-201ENST00000415469 C9JVG2 144 aa9.38□□□□□ -0.91
LINC00858-201ENST00000415469 CBX4O00257 560 aa9.38□□□□□ -0.91
LINC00858-201ENST00000415469 UBFD1O14562 309 aaKnown RBP9.38□□□□□ -0.91
LINC00858-201ENST00000415469 COCHO43405 550 aa9.38□□□□□ -0.91
LINC00858-201ENST00000415469 PRAMEF11O60813 436 aa9.38□□□□□ -0.91
LINC00858-201ENST00000415469 ZNF189O75820 626 aaPredicted RBP9.38□□□□□ -0.91
LINC00858-201ENST00000415469 RTN3O95197 1032 aaPredicted RBP9.38□□□□□ -0.91
LINC00858-201ENST00000415469 SIX3O95343 332 aaPredicted RBP9.38□□□□□ -0.91
LINC00858-201ENST00000415469 SPATA31D3P0C874 917 aa9.38□□□□□ -0.91
LINC00858-201ENST00000415469 ENO3P13929 434 aaPredicted RBP9.38□□□□□ -0.91
LINC00858-201ENST00000415469 CRABP2P29373 138 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms