RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 POLE2P56282 527 aa12.03□□□□□ -0.48
PTPRF-205ENST00000414879 ZC3H12BQ5HYM0 836 aaKnown RBP12.03□□□□□ -0.48
PTPRF-205ENST00000414879 R3HCC1LQ7Z5L2 792 aaKnown RBP12.03□□□□□ -0.48
PTPRF-205ENST00000414879 SERINC5Q86VE9 423 aa12.03□□□□□ -0.48
PTPRF-205ENST00000414879 PTGR2Q8N8N7 351 aaPredicted RBP12.03□□□□□ -0.48
PTPRF-205ENST00000414879 GRIN3AQ8TCU5 1115 aa12.03□□□□□ -0.48
PTPRF-205ENST00000414879 ZNF516Q92618 1163 aa12.03□□□□□ -0.48
PTPRF-205ENST00000414879 HDAC10Q969S8 669 aa12.03□□□□□ -0.48
PTPRF-205ENST00000414879 MFSD1Q9H3U5 465 aa12.03□□□□□ -0.48
PTPRF-205ENST00000414879 NOD2Q9HC29 1040 aa12.03□□□□□ -0.48
PTPRF-205ENST00000414879 ADPRHL2Q9NX46 363 aa12.03□□□□□ -0.48
PTPRF-205ENST00000414879 IMPAD1Q9NX62 359 aa12.03□□□□□ -0.48
PTPRF-205ENST00000414879 SCML2Q9UQR0 700 aa12.03□□□□□ -0.48
PTPRF-205ENST00000414879 DDX60Q8IY21 1712 aaKnown RBP12.03□□□□□ -0.48
PTPRF-205ENST00000414879 PHGDHO43175 533 aaKnown RBP12.03□□□□□ -0.48
PTPRF-205ENST00000414879 SLC7A4O43246 635 aa12.03□□□□□ -0.48
PTPRF-205ENST00000414879 DEAF1O75398 565 aaPredicted RBP12.03□□□□□ -0.48
PTPRF-205ENST00000414879 IL1BP01584 269 aa12.03□□□□□ -0.48
PTPRF-205ENST00000414879 EPS8Q12929 822 aa12.03□□□□□ -0.48
PTPRF-205ENST00000414879 GPR17Q13304 367 aa12.03□□□□□ -0.48
PTPRF-205ENST00000414879 CLYBLQ8N0X4 340 aa12.03□□□□□ -0.48
PTPRF-205ENST00000414879 ENTPD4Q9Y227 616 aa12.03□□□□□ -0.48
PTPRF-205ENST00000414879 ULK1O75385 1050 aa12.02□□□□□ -0.48
PTPRF-205ENST00000414879 IPO13O94829 963 aaKnown RBP12.02□□□□□ -0.48
PTPRF-205ENST00000414879 UBOX5O94941 541 aa12.02□□□□□ -0.48
PTPRF-205ENST00000414879 C8AP07357 584 aa12.02□□□□□ -0.48
PTPRF-205ENST00000414879 SLC35G4P0C7Q5 338 aa12.02□□□□□ -0.48
PTPRF-205ENST00000414879 PKMP14618 531 aaKnown RBP12.02□□□□□ -0.48
PTPRF-205ENST00000414879 FASP25445 335 aa12.02□□□□□ -0.48
PTPRF-205ENST00000414879 MC4RP32245 332 aa12.02□□□□□ -0.48
PTPRF-205ENST00000414879 CLEC20AQ6ZU45 233 aa12.02□□□□□ -0.48
PTPRF-205ENST00000414879 CHPFQ8IZ52 775 aa12.02□□□□□ -0.48
PTPRF-205ENST00000414879 SHCBP1LQ9BZQ2 653 aa12.02□□□□□ -0.48
PTPRF-205ENST00000414879 ALG9Q9H6U8 611 aa12.02□□□□□ -0.48
PTPRF-205ENST00000414879 FBXO6Q9NRD1 293 aaPredicted RBP12.02□□□□□ -0.48
PTPRF-205ENST00000414879 TMPRSS4Q9NRS4 437 aa12.02□□□□□ -0.48
PTPRF-205ENST00000414879 SNX15Q9NRS6 342 aa12.02□□□□□ -0.48
PTPRF-205ENST00000414879 MFHAS1Q9Y4C4 1052 aa12.02□□□□□ -0.48
PTPRF-205ENST00000414879 RAI2Q9Y5P3 530 aa12.02□□□□□ -0.48
PTPRF-205ENST00000414879 IGKV6-21A0A0C4DH24 114 aa12.02□□□□□ -0.49
PTPRF-205ENST00000414879 KRT87PA6NCN2 255 aa12.02□□□□□ -0.49
PTPRF-205ENST00000414879 PABPC1P11940 636 aaKnown RBP12.02□□□□□ -0.49
PTPRF-205ENST00000414879 NTSP30990 170 aa12.02□□□□□ -0.49
PTPRF-205ENST00000414879 RPA3P35244 121 aaPredicted RBP12.02□□□□□ -0.49
PTPRF-205ENST00000414879 CPA2P48052 419 aa12.02□□□□□ -0.49
PTPRF-205ENST00000414879 ATXN3P54252 364 aaPredicted RBP12.02□□□□□ -0.49
PTPRF-205ENST00000414879 RNASEH2BQ5TBB1 312 aaKnown RBP12.02□□□□□ -0.49
PTPRF-205ENST00000414879 KIF2BQ8N4N8 673 aa12.02□□□□□ -0.49
PTPRF-205ENST00000414879 SELENOMQ8WWX9 145 aa12.02□□□□□ -0.49
PTPRF-205ENST00000414879 CLP1Q92989 425 aaKnown RBP12.02□□□□□ -0.49
PTPRF-205ENST00000414879 CXorf40BQ96DE9 158 aa12.02□□□□□ -0.49
PTPRF-205ENST00000414879 FEM1CQ96JP0 617 aa12.02□□□□□ -0.49
PTPRF-205ENST00000414879 EPS8L2Q9H6S3 715 aa12.02□□□□□ -0.49
PTPRF-205ENST00000414879 HECAQ9UBI9 543 aaPredicted RBP12.02□□□□□ -0.49
PTPRF-205ENST00000414879 LGALS13Q9UHV8 139 aa12.02□□□□□ -0.49
PTPRF-205ENST00000414879 INSIG1O15503 277 aa12.02□□□□□ -0.49
PTPRF-205ENST00000414879 RECQL5O94762 991 aaPredicted RBP12.02□□□□□ -0.49
PTPRF-205ENST00000414879 ATXN8OSP0DMR3 200 aa12.02□□□□□ -0.49
PTPRF-205ENST00000414879 HPGDP15428 266 aa12.02□□□□□ -0.49
PTPRF-205ENST00000414879 IFNGR2P38484 337 aa12.02□□□□□ -0.49
PTPRF-205ENST00000414879 PFKPQ01813 784 aa12.02□□□□□ -0.49
PTPRF-205ENST00000414879 GPRIN3Q6ZVF9 776 aa12.02□□□□□ -0.49
PTPRF-205ENST00000414879 C11orf96Q7Z7L8 435 aa12.02□□□□□ -0.49
PTPRF-205ENST00000414879 SLC41A1Q8IVJ1 513 aa12.02□□□□□ -0.49
PTPRF-205ENST00000414879 CDK20Q8IZL9 346 aa12.02□□□□□ -0.49
PTPRF-205ENST00000414879 TEKT5Q96M29 485 aa12.02□□□□□ -0.49
PTPRF-205ENST00000414879 FCRL5Q96RD9 977 aa12.02□□□□□ -0.49
PTPRF-205ENST00000414879 TCF25Q9BQ70 676 aa12.02□□□□□ -0.49
PTPRF-205ENST00000414879 C16orf70Q9BSU1 422 aa12.02□□□□□ -0.49
PTPRF-205ENST00000414879 INTS7Q9NVH2 962 aaKnown RBP12.02□□□□□ -0.49
PTPRF-205ENST00000414879 RPS6KB2Q9UBS0 482 aa12.02□□□□□ -0.49
PTPRF-205ENST00000414879 TCAF1Q9Y4C2 921 aa12.02□□□□□ -0.49
PTPRF-205ENST00000414879 ILVBLA1L0T0 632 aa12.02□□□□□ -0.49
PTPRF-205ENST00000414879 SNX3O60493 162 aa12.02□□□□□ -0.49
PTPRF-205ENST00000414879 BAIAP3O94812 1187 aa12.02□□□□□ -0.49
PTPRF-205ENST00000414879 NAGLUP54802 743 aa12.02□□□□□ -0.49
PTPRF-205ENST00000414879 IL27RAQ6UWB1 636 aa12.02□□□□□ -0.49
PTPRF-205ENST00000414879 DHFR2Q86XF0 187 aa12.02□□□□□ -0.49
PTPRF-205ENST00000414879 SYT12Q8IV01 421 aa12.02□□□□□ -0.49
PTPRF-205ENST00000414879 PPP1R13LQ8WUF5 828 aa12.02□□□□□ -0.49
PTPRF-205ENST00000414879 CPT1BQ92523 772 aa12.02□□□□□ -0.49
PTPRF-205ENST00000414879 PRICKLE1Q96MT3 831 aaPredicted RBP12.02□□□□□ -0.49
PTPRF-205ENST00000414879 DPEP3Q9H4B8 488 aa12.02□□□□□ -0.49
PTPRF-205ENST00000414879 LEF1Q9UJU2 399 aaPredicted RBP12.02□□□□□ -0.49
PTPRF-205ENST00000414879 NAV1Q8NEY1 1877 aa12.01□□□□□ -0.49
PTPRF-205ENST00000414879 GLYATL1P3A0A0U1RQE8 302 aa12.01□□□□□ -0.49
PTPRF-205ENST00000414879 A0A1W2PQ45 241 aaPredicted RBP12.01□□□□□ -0.49
PTPRF-205ENST00000414879 A0A1W2PQY0 241 aa12.01□□□□□ -0.49
PTPRF-205ENST00000414879 NEDD8-MDP1E9PL57 170 aa12.01□□□□□ -0.49
PTPRF-205ENST00000414879 GABRDO14764 452 aa12.01□□□□□ -0.49
PTPRF-205ENST00000414879 ANXA6P08133 673 aa12.01□□□□□ -0.49
PTPRF-205ENST00000414879 TCN1P20061 433 aaPredicted RBP12.01□□□□□ -0.49
PTPRF-205ENST00000414879 GBE1Q04446 702 aa12.01□□□□□ -0.49
PTPRF-205ENST00000414879 HSPA14Q0VDF9 509 aa12.01□□□□□ -0.49
PTPRF-205ENST00000414879 SEMA5AQ13591 1074 aa12.01□□□□□ -0.49
PTPRF-205ENST00000414879 PFKFB4Q16877 469 aa12.01□□□□□ -0.49
PTPRF-205ENST00000414879 SAPCD2Q86UD0 394 aa12.01□□□□□ -0.49
PTPRF-205ENST00000414879 BRSK1Q8TDC3 778 aa12.01□□□□□ -0.49
PTPRF-205ENST00000414879 CYGBQ8WWM9 190 aa12.01□□□□□ -0.49
PTPRF-205ENST00000414879 VPS50Q96JG6 964 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms