RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 LRRC40Q9H9A6 602 aa17.32■□□□□ 0.36
PTPRC-206ENST00000413409 MLXIPLQ9NP71 852 aa17.32■□□□□ 0.36
PTPRC-206ENST00000413409 TLR8Q9NR97 1041 aaKnown RBP17.32■□□□□ 0.36
PTPRC-206ENST00000413409 SMYD2Q9NRG4 433 aa17.32■□□□□ 0.36
PTPRC-206ENST00000413409 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.32■□□□□ 0.36
PTPRC-206ENST00000413409 MAFFQ9ULX9 164 aa17.32■□□□□ 0.36
PTPRC-206ENST00000413409 HS3ST4Q9Y661 456 aa17.32■□□□□ 0.36
PTPRC-206ENST00000413409 CXorf49A8MYA2 514 aaPredicted RBP17.31■□□□□ 0.36
PTPRC-206ENST00000413409 E9PAM4 449 aa17.31■□□□□ 0.36
PTPRC-206ENST00000413409 ZBTB24O43167 697 aaPredicted RBP17.31■□□□□ 0.36
PTPRC-206ENST00000413409 ZDHHC11BP0C7U3 371 aa17.31■□□□□ 0.36
PTPRC-206ENST00000413409 CSH1P0DML2 217 aa17.31■□□□□ 0.36
PTPRC-206ENST00000413409 CSH2P0DML3 217 aa17.31■□□□□ 0.36
PTPRC-206ENST00000413409 NFKB1P19838 968 aa17.31■□□□□ 0.36
PTPRC-206ENST00000413409 MGAT1P26572 445 aa17.31■□□□□ 0.36
PTPRC-206ENST00000413409 CD68P34810 354 aaPredicted RBP17.31■□□□□ 0.36
PTPRC-206ENST00000413409 GALK1P51570 392 aa17.31■□□□□ 0.36
PTPRC-206ENST00000413409 DGKEP52429 567 aa17.31■□□□□ 0.36
PTPRC-206ENST00000413409 DNAJC3Q13217 504 aa17.31■□□□□ 0.36
PTPRC-206ENST00000413409 PRPSAP1Q14558 356 aa17.31■□□□□ 0.36
PTPRC-206ENST00000413409 DMC1Q14565 340 aa17.31■□□□□ 0.36
PTPRC-206ENST00000413409 CRYMQ14894 314 aa17.31■□□□□ 0.36
PTPRC-206ENST00000413409 FAM182AQ5T1J6 154 aa17.31■□□□□ 0.36
PTPRC-206ENST00000413409 GPR158Q5T848 1215 aa17.31■□□□□ 0.36
PTPRC-206ENST00000413409 SDHAF4Q5VUM1 108 aa17.31■□□□□ 0.36
PTPRC-206ENST00000413409 SH2D5Q6ZV89 423 aa17.31■□□□□ 0.36
PTPRC-206ENST00000413409 SYT13Q7L8C5 426 aa17.31■□□□□ 0.36
PTPRC-206ENST00000413409 ATP6V0D2Q8N8Y2 350 aa17.31■□□□□ 0.36
PTPRC-206ENST00000413409 RPLP0P6Q8NHW5 317 aa17.31■□□□□ 0.36
PTPRC-206ENST00000413409 CDKL2Q92772 493 aa17.31■□□□□ 0.36
PTPRC-206ENST00000413409 IL12RB2Q99665 862 aa17.31■□□□□ 0.36
PTPRC-206ENST00000413409 TTLL2Q9BWV7 592 aa17.31■□□□□ 0.36
PTPRC-206ENST00000413409 TPSD1Q9BZJ3 242 aa17.31■□□□□ 0.36
PTPRC-206ENST00000413409 SIK2Q9H0K1 926 aa17.31■□□□□ 0.36
PTPRC-206ENST00000413409 ATXN3LQ9H3M9 355 aa17.31■□□□□ 0.36
PTPRC-206ENST00000413409 FGFR1OP2Q9NVK5 253 aa17.31■□□□□ 0.36
PTPRC-206ENST00000413409 SYBUQ9NX95 663 aa17.31■□□□□ 0.36
PTPRC-206ENST00000413409 PPARGC1AQ9UBK2 798 aaKnown RBP17.31■□□□□ 0.36
PTPRC-206ENST00000413409 EVLQ9UI08 416 aaPredicted RBP17.31■□□□□ 0.36
PTPRC-206ENST00000413409 NUP210Q8TEM1 1887 aaPredicted RBP17.31■□□□□ 0.36
PTPRC-206ENST00000413409 EIF4E1BA6NMX2 242 aaKnown RBP17.3■□□□□ 0.36
PTPRC-206ENST00000413409 UPK3BL1B0FP48 263 aa17.3■□□□□ 0.36
PTPRC-206ENST00000413409 UPK3BL2E5RIL1 263 aa17.3■□□□□ 0.36
PTPRC-206ENST00000413409 H0Y626 953 aa17.3■□□□□ 0.36
PTPRC-206ENST00000413409 TRIM16O95361 564 aa17.3■□□□□ 0.36
PTPRC-206ENST00000413409 IGLV3-27P01718 113 aa17.3■□□□□ 0.36
PTPRC-206ENST00000413409 PRB1P04280 392 aa17.3■□□□□ 0.36
PTPRC-206ENST00000413409 FOXN2P32314 431 aa17.3■□□□□ 0.36
PTPRC-206ENST00000413409 SESN2P58004 480 aaPredicted RBP17.3■□□□□ 0.36
PTPRC-206ENST00000413409 RUNX3Q13761 415 aa17.3■□□□□ 0.36
PTPRC-206ENST00000413409 SLC1A5Q15758 541 aa17.3■□□□□ 0.36
PTPRC-206ENST00000413409 TRIM61Q5EBN2 209 aa17.3■□□□□ 0.36
PTPRC-206ENST00000413409 PIK3R6Q5UE93 754 aa17.3■□□□□ 0.36
PTPRC-206ENST00000413409 TRIM68Q6AZZ1 485 aa17.3■□□□□ 0.36
PTPRC-206ENST00000413409 TRMT10BQ6PF06 316 aaKnown RBP17.3■□□□□ 0.36
PTPRC-206ENST00000413409 TIFABQ6ZNK6 161 aa17.3■□□□□ 0.36
PTPRC-206ENST00000413409 CHSY1Q86X52 802 aa17.3■□□□□ 0.36
PTPRC-206ENST00000413409 ZNF683Q8IZ20 524 aa17.3■□□□□ 0.36
PTPRC-206ENST00000413409 ZNF276Q8N554 614 aa17.3■□□□□ 0.36
PTPRC-206ENST00000413409 TTC9BQ8N6N2 239 aa17.3■□□□□ 0.36
PTPRC-206ENST00000413409 CELF6Q96J87 481 aaKnown RBP17.3■□□□□ 0.36
PTPRC-206ENST00000413409 CDK5RAP1Q96SZ6 601 aaKnown RBP17.3■□□□□ 0.36
PTPRC-206ENST00000413409 MLPHQ9BV36 600 aaPredicted RBP17.3■□□□□ 0.36
PTPRC-206ENST00000413409 TMEM74BQ9NUR3 256 aa17.3■□□□□ 0.36
PTPRC-206ENST00000413409 RAXQ9Y2V3 346 aa17.3■□□□□ 0.36
PTPRC-206ENST00000413409 IGLV3-10A0A075B6K4 115 aa17.29■□□□□ 0.36
PTPRC-206ENST00000413409 ARHGAP42A6NI28 874 aa17.29■□□□□ 0.36
PTPRC-206ENST00000413409 TRIM49D1C9J1S8 452 aa17.29■□□□□ 0.36
PTPRC-206ENST00000413409 F5H423 210 aaPredicted RBP17.29■□□□□ 0.36
PTPRC-206ENST00000413409 MYO1CO00159 1063 aa17.29■□□□□ 0.36
PTPRC-206ENST00000413409 MATN3O15232 486 aa17.29■□□□□ 0.36
PTPRC-206ENST00000413409 DHRS4L1P0CG22 281 aa17.29■□□□□ 0.36
PTPRC-206ENST00000413409 RHOQP17081 205 aa17.29■□□□□ 0.36
PTPRC-206ENST00000413409 ENGP17813 658 aa17.29■□□□□ 0.36
PTPRC-206ENST00000413409 WEE1P30291 646 aa17.29■□□□□ 0.36
PTPRC-206ENST00000413409 NPY2RP49146 381 aa17.29■□□□□ 0.36
PTPRC-206ENST00000413409 DHPSP49366 369 aaPredicted RBP17.29■□□□□ 0.36
PTPRC-206ENST00000413409 TUBP50607 506 aa17.29■□□□□ 0.36
PTPRC-206ENST00000413409 NDST2P52849 883 aa17.29■□□□□ 0.36
PTPRC-206ENST00000413409 IFT88Q13099 833 aa17.29■□□□□ 0.36
PTPRC-206ENST00000413409 DUSP4Q13115 394 aa17.29■□□□□ 0.36
PTPRC-206ENST00000413409 SEPT7Q16181 437 aaKnown RBP17.29■□□□□ 0.36
PTPRC-206ENST00000413409 MGAT5BQ3V5L5 792 aa17.29■□□□□ 0.36
PTPRC-206ENST00000413409 ARMC3Q5W041 872 aa17.29■□□□□ 0.36
PTPRC-206ENST00000413409 NAPEPLDQ6IQ20 393 aa17.29■□□□□ 0.36
PTPRC-206ENST00000413409 CASC4Q6P4E1 433 aa17.29■□□□□ 0.36
PTPRC-206ENST00000413409 LVRNQ6Q4G3 990 aa17.29■□□□□ 0.36
PTPRC-206ENST00000413409 CCDC121Q6ZUS5 278 aa17.29■□□□□ 0.36
PTPRC-206ENST00000413409 SPATA21Q7Z572 469 aa17.29■□□□□ 0.36
PTPRC-206ENST00000413409 DNAJB7Q7Z6W7 309 aaPredicted RBP17.29■□□□□ 0.36
PTPRC-206ENST00000413409 LINC00523Q86TU6 105 aa17.29■□□□□ 0.36
PTPRC-206ENST00000413409 OTUD6BQ8N6M0 293 aa17.29■□□□□ 0.36
PTPRC-206ENST00000413409 LRRC8CQ8TDW0 803 aa17.29■□□□□ 0.36
PTPRC-206ENST00000413409 OVCA2Q8WZ82 227 aa17.29■□□□□ 0.36
PTPRC-206ENST00000413409 OXNAD1Q96HP4 312 aaPredicted RBP17.29■□□□□ 0.36
PTPRC-206ENST00000413409 SERAC1Q96JX3 654 aa17.29■□□□□ 0.36
PTPRC-206ENST00000413409 BTN2A3PQ96KV6 586 aa17.29■□□□□ 0.36
PTPRC-206ENST00000413409 FCRL5Q96RD9 977 aa17.29■□□□□ 0.36
PTPRC-206ENST00000413409 ELAC2Q9BQ52 826 aaKnown RBP17.29■□□□□ 0.36
PTPRC-206ENST00000413409 EBF3Q9H4W6 596 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms