RNA–Protein interactions for RNA: ENST00000413002.5

SSB-203, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 674 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-203ENST00000413002 TEX26Q8N6G2 289 aa13.24□□□□□ -0.29
SSB-203ENST00000413002 RHBDD1Q8TEB9 315 aa13.24□□□□□ -0.29
SSB-203ENST00000413002 HAUS1Q96CS2 278 aa13.24□□□□□ -0.29
SSB-203ENST00000413002 ECHDC3Q96DC8 303 aa13.24□□□□□ -0.29
SSB-203ENST00000413002 TSGA13Q96PP4 275 aa13.24□□□□□ -0.29
SSB-203ENST00000413002 HEMGNQ9BXL5 484 aa13.24□□□□□ -0.29
SSB-203ENST00000413002 SLC32A1Q9H598 525 aa13.24□□□□□ -0.29
SSB-203ENST00000413002 MBNL1Q9NR56 388 aaKnown RBP13.24□□□□□ -0.29
SSB-203ENST00000413002 ATP8A1Q9Y2Q0 1164 aa13.24□□□□□ -0.29
SSB-203ENST00000413002 PCDHB9Q9Y5E1 797 aa13.24□□□□□ -0.29
SSB-203ENST00000413002 CST8O60676 142 aa13.23□□□□□ -0.29
SSB-203ENST00000413002 NEBLO76041 1014 aa13.23□□□□□ -0.29
SSB-203ENST00000413002 TM7SF2O76062 418 aa13.23□□□□□ -0.29
SSB-203ENST00000413002 TOP3BO95985 862 aaKnown RBP13.23□□□□□ -0.29
SSB-203ENST00000413002 HLA-DQB2P05538 268 aa13.23□□□□□ -0.29
SSB-203ENST00000413002 C6P13671 934 aa13.23□□□□□ -0.29
SSB-203ENST00000413002 CEACAM1P13688 526 aa13.23□□□□□ -0.29
SSB-203ENST00000413002 PECAM1P16284 738 aaPredicted RBP13.23□□□□□ -0.29
SSB-203ENST00000413002 MX2P20592 715 aa13.23□□□□□ -0.29
SSB-203ENST00000413002 HSPA9P38646 679 aaKnown RBP13.23□□□□□ -0.29
SSB-203ENST00000413002 MMP12P39900 470 aa13.23□□□□□ -0.29
SSB-203ENST00000413002 NIPAL4Q0D2K0 466 aa13.23□□□□□ -0.29
SSB-203ENST00000413002 ELP6Q0PNE2 266 aa13.23□□□□□ -0.29
SSB-203ENST00000413002 AP1B1Q10567 949 aa13.23□□□□□ -0.29
SSB-203ENST00000413002 RALGDSQ12967 914 aa13.23□□□□□ -0.29
SSB-203ENST00000413002 ZBTB17Q13105 803 aa13.23□□□□□ -0.29
SSB-203ENST00000413002 HNRNPDQ14103 355 aaKnown RBP13.23□□□□□ -0.29
SSB-203ENST00000413002 ERAP2Q6P179 960 aa13.23□□□□□ -0.29
SSB-203ENST00000413002 HCAR2Q8TDS4 363 aa13.23□□□□□ -0.29
SSB-203ENST00000413002 MAML1Q92585 1016 aa13.23□□□□□ -0.29
SSB-203ENST00000413002 ZNF830Q96NB3 372 aaPredicted RBP13.23□□□□□ -0.29
SSB-203ENST00000413002 SEPT10Q9P0V9 454 aa13.23□□□□□ -0.29
SSB-203ENST00000413002 PCOLCE2Q9UKZ9 415 aa13.23□□□□□ -0.29
SSB-203ENST00000413002 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.22□□□□□ -0.29
SSB-203ENST00000413002 GRID2IPA4D2P6 1211 aa13.22□□□□□ -0.29
SSB-203ENST00000413002 A6NNZ2 444 aa13.22□□□□□ -0.29
SSB-203ENST00000413002 ZNF487B1APH4 448 aa13.22□□□□□ -0.29
SSB-203ENST00000413002 FPGTO14772 594 aa13.22□□□□□ -0.29
SSB-203ENST00000413002 PJA2O43164 708 aa13.22□□□□□ -0.29
SSB-203ENST00000413002 LZTS3O60299 673 aaPredicted RBP13.22□□□□□ -0.29
SSB-203ENST00000413002 CBFA2T3O75081 653 aa13.22□□□□□ -0.29
SSB-203ENST00000413002 ZRANB2O95218 330 aaKnown RBP eCLIP13.22□□□□□ -0.29
SSB-203ENST00000413002 CPP00450 1065 aa13.22□□□□□ -0.29
SSB-203ENST00000413002 PDHA1P08559 390 aa13.22□□□□□ -0.29
SSB-203ENST00000413002 ADRB1P08588 477 aa13.22□□□□□ -0.29
SSB-203ENST00000413002 ZNF883P0CG24 379 aa13.22□□□□□ -0.29
SSB-203ENST00000413002 CTPS1P17812 591 aa13.22□□□□□ -0.29
SSB-203ENST00000413002 SPINK2P20155 84 aa13.22□□□□□ -0.29
SSB-203ENST00000413002 IGFALSP35858 605 aa13.22□□□□□ -0.29
SSB-203ENST00000413002 PPIDQ08752 370 aaKnown RBP13.22□□□□□ -0.29
SSB-203ENST00000413002 TRIP6Q15654 476 aaKnown RBP13.22□□□□□ -0.29
SSB-203ENST00000413002 DENND2CQ68D51 928 aa13.22□□□□□ -0.29
SSB-203ENST00000413002 TIGD7Q6NT04 549 aaPredicted RBP13.22□□□□□ -0.29
SSB-203ENST00000413002 AADACL2Q6P093 401 aa13.22□□□□□ -0.29
SSB-203ENST00000413002 NYAP1Q6ZVC0 841 aa13.22□□□□□ -0.29
SSB-203ENST00000413002 ABI3BPQ7Z7G0 1075 aa13.22□□□□□ -0.29
SSB-203ENST00000413002 IQCHQ86VS3 1027 aa13.22□□□□□ -0.29
SSB-203ENST00000413002 KATNAL2Q8IYT4 538 aa13.22□□□□□ -0.29
SSB-203ENST00000413002 CNTD1Q8N815 330 aa13.22□□□□□ -0.29
SSB-203ENST00000413002 PNPLA1Q8N8W4 532 aa13.22□□□□□ -0.29
SSB-203ENST00000413002 TP53I13Q8NBR0 393 aaPredicted RBP13.22□□□□□ -0.29
SSB-203ENST00000413002 ARRDC2Q8TBH0 407 aa13.22□□□□□ -0.29
SSB-203ENST00000413002 KIAA1524Q8TCG1 905 aa13.22□□□□□ -0.29
SSB-203ENST00000413002 CENPTQ96BT3 561 aa13.22□□□□□ -0.29
SSB-203ENST00000413002 HDAC11Q96DB2 347 aa13.22□□□□□ -0.29
SSB-203ENST00000413002 HERPUD2Q9BSE4 406 aa13.22□□□□□ -0.29
SSB-203ENST00000413002 POLR1EQ9GZS1 481 aaKnown RBP13.22□□□□□ -0.29
SSB-203ENST00000413002 B4GALT6Q9UBX8 382 aa13.22□□□□□ -0.29
SSB-203ENST00000413002 RAI2Q9Y5P3 530 aa13.22□□□□□ -0.29
SSB-203ENST00000413002 HS3ST3A1Q9Y663 406 aa13.22□□□□□ -0.29
SSB-203ENST00000413002 TMEM131Q92545 1883 aa13.22□□□□□ -0.29
SSB-203ENST00000413002 hCG_1818297A0A087WSY0 165 aa13.21□□□□□ -0.29
SSB-203ENST00000413002 BTNL10A8MVZ5 291 aa13.21□□□□□ -0.29
SSB-203ENST00000413002 GOLGA6L6A8MZA4 724 aa13.21□□□□□ -0.29
SSB-203ENST00000413002 HTRA2O43464 458 aaPredicted RBP13.21□□□□□ -0.29
SSB-203ENST00000413002 PCDHGA12O60330 932 aa13.21□□□□□ -0.29
SSB-203ENST00000413002 FTCDO95954 541 aa13.21□□□□□ -0.29
SSB-203ENST00000413002 ITGAVP06756 1048 aa13.21□□□□□ -0.29
SSB-203ENST00000413002 ALPIP09923 528 aa13.21□□□□□ -0.29
SSB-203ENST00000413002 EPHA8P29322 1005 aaPredicted RBP13.21□□□□□ -0.29
SSB-203ENST00000413002 ARRB1P49407 418 aaPredicted RBP13.21□□□□□ -0.29
SSB-203ENST00000413002 POLR2LP62875 67 aaKnown RBP13.21□□□□□ -0.29
SSB-203ENST00000413002 KIF5AQ12840 1032 aa13.21□□□□□ -0.29
SSB-203ENST00000413002 OVGP1Q12889 678 aa13.21□□□□□ -0.29
SSB-203ENST00000413002 FOXC1Q12948 553 aa13.21□□□□□ -0.29
SSB-203ENST00000413002 PDE1CQ14123 709 aaPredicted RBP13.21□□□□□ -0.29
SSB-203ENST00000413002 FZD2Q14332 565 aa13.21□□□□□ -0.29
SSB-203ENST00000413002 SUZ12Q15022 739 aaKnown RBP13.21□□□□□ -0.29
SSB-203ENST00000413002 PDK1Q15118 436 aa13.21□□□□□ -0.29
SSB-203ENST00000413002 IRF4Q15306 451 aa13.21□□□□□ -0.29
SSB-203ENST00000413002 TAZQ16635 292 aa13.21□□□□□ -0.29
SSB-203ENST00000413002 WSCD2Q2TBF2 565 aa13.21□□□□□ -0.29
SSB-203ENST00000413002 CCDC157Q569K6 752 aa13.21□□□□□ -0.29
SSB-203ENST00000413002 LIPIQ6XZB0 460 aa13.21□□□□□ -0.29
SSB-203ENST00000413002 DBX2Q6ZNG2 339 aa13.21□□□□□ -0.29
SSB-203ENST00000413002 VSIG1Q86XK7 387 aa13.21□□□□□ -0.29
SSB-203ENST00000413002 RCOR2Q8IZ40 523 aa13.21□□□□□ -0.29
SSB-203ENST00000413002 EID2Q8N6I1 236 aa13.21□□□□□ -0.29
SSB-203ENST00000413002 LRRC57Q8N9N7 239 aa13.21□□□□□ -0.29
SSB-203ENST00000413002 SAP25Q8TEE9 199 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms