RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 RUNX3Q13761 415 aa12.53□□□□□ -0.4
CHMP3-204ENST00000409727 SLC14A2Q15849 920 aa12.53□□□□□ -0.4
CHMP3-204ENST00000409727 TSTD2Q5T7W7 516 aa12.53□□□□□ -0.4
CHMP3-204ENST00000409727 ARMC12Q5T9G4 340 aa12.53□□□□□ -0.4
CHMP3-204ENST00000409727 MROH9Q5TGP6 573 aa12.53□□□□□ -0.4
CHMP3-204ENST00000409727 GRAMD4Q6IC98 578 aa12.53□□□□□ -0.4
CHMP3-204ENST00000409727 KDM7AQ6ZMT4 941 aa12.53□□□□□ -0.4
CHMP3-204ENST00000409727 DPY19L3Q6ZPD9 716 aa12.53□□□□□ -0.4
CHMP3-204ENST00000409727 CYS1Q717R9 158 aa12.53□□□□□ -0.4
CHMP3-204ENST00000409727 KIAA0907Q7Z7F0 614 aaPredicted RBP12.53□□□□□ -0.4
CHMP3-204ENST00000409727 ETFBKMTQ8IXQ9 262 aa12.53□□□□□ -0.4
CHMP3-204ENST00000409727 CPA6Q8N4T0 437 aa12.53□□□□□ -0.4
CHMP3-204ENST00000409727 KIAA1958Q8N8K9 716 aa12.53□□□□□ -0.4
CHMP3-204ENST00000409727 PTCD2Q8WV60 388 aaKnown RBP12.53□□□□□ -0.4
CHMP3-204ENST00000409727 PPM1EQ8WY54 764 aa12.53□□□□□ -0.4
CHMP3-204ENST00000409727 E2F7Q96AV8 911 aa12.53□□□□□ -0.4
CHMP3-204ENST00000409727 ELSPBP1Q96BH3 223 aa12.53□□□□□ -0.4
CHMP3-204ENST00000409727 MYO19Q96H55 970 aa12.53□□□□□ -0.4
CHMP3-204ENST00000409727 GAS2L1Q99501 681 aaPredicted RBP12.53□□□□□ -0.4
CHMP3-204ENST00000409727 TREX1Q9NSU2 369 aa12.53□□□□□ -0.4
CHMP3-204ENST00000409727 PRKAG3Q9UGI9 489 aa12.53□□□□□ -0.4
CHMP3-204ENST00000409727 CD207Q9UJ71 328 aa12.53□□□□□ -0.4
CHMP3-204ENST00000409727 NUMBLQ9Y6R0 609 aa12.53□□□□□ -0.4
CHMP3-204ENST00000409727 ANKRD36A6QL64 1941 aa12.53□□□□□ -0.4
CHMP3-204ENST00000409727 ANKRD66B4E2M5 251 aa12.53□□□□□ -0.4
CHMP3-204ENST00000409727 TRIM49D1C9J1S8 452 aa12.53□□□□□ -0.4
CHMP3-204ENST00000409727 PRRT4C9JH25 899 aa12.53□□□□□ -0.4
CHMP3-204ENST00000409727 LDB2O43679 373 aa12.53□□□□□ -0.4
CHMP3-204ENST00000409727 ALPIP09923 528 aa12.53□□□□□ -0.4
CHMP3-204ENST00000409727 ALADP13716 330 aa12.53□□□□□ -0.4
CHMP3-204ENST00000409727 KRT4P19013 534 aa12.53□□□□□ -0.4
CHMP3-204ENST00000409727 PAMP19021 973 aa12.53□□□□□ -0.4
CHMP3-204ENST00000409727 ARNTP27540 789 aa12.53□□□□□ -0.4
CHMP3-204ENST00000409727 CCNHP51946 323 aaPredicted RBP12.53□□□□□ -0.4
CHMP3-204ENST00000409727 NR1H3Q13133 447 aa12.53□□□□□ -0.4
CHMP3-204ENST00000409727 SKIV2LQ15477 1246 aaKnown RBP12.53□□□□□ -0.4
CHMP3-204ENST00000409727 MYLK3Q32MK0 819 aa12.53□□□□□ -0.4
CHMP3-204ENST00000409727 CARD16Q5EG05 197 aa12.53□□□□□ -0.4
CHMP3-204ENST00000409727 PACS1Q6VY07 963 aa12.53□□□□□ -0.4
CHMP3-204ENST00000409727 MARK2Q7KZI7 788 aaKnown RBP12.53□□□□□ -0.4
CHMP3-204ENST00000409727 GLT6D1Q7Z4J2 308 aa12.53□□□□□ -0.4
CHMP3-204ENST00000409727 STRA8Q7Z7C7 330 aa12.53□□□□□ -0.4
CHMP3-204ENST00000409727 OTUD6BQ8N6M0 293 aa12.53□□□□□ -0.4
CHMP3-204ENST00000409727 ANKRD42Q8N9B4 389 aa12.53□□□□□ -0.4
CHMP3-204ENST00000409727 CHST14Q8NCH0 376 aa12.53□□□□□ -0.4
CHMP3-204ENST00000409727 OR13J1Q8NGT2 312 aa12.53□□□□□ -0.4
CHMP3-204ENST00000409727 GRIN3AQ8TCU5 1115 aa12.53□□□□□ -0.4
CHMP3-204ENST00000409727 MGARPQ8TDB4 240 aa12.53□□□□□ -0.4
CHMP3-204ENST00000409727 BRSK1Q8TDC3 778 aa12.53□□□□□ -0.4
CHMP3-204ENST00000409727 ERLEC1Q96DZ1 483 aa12.53□□□□□ -0.4
CHMP3-204ENST00000409727 DNAJC1Q96KC8 554 aaKnown RBP12.53□□□□□ -0.4
CHMP3-204ENST00000409727 MRGPRX3Q96LB0 322 aa12.53□□□□□ -0.4
CHMP3-204ENST00000409727 RANBP9Q96S59 729 aa12.53□□□□□ -0.4
CHMP3-204ENST00000409727 TRMT61BQ9BVS5 477 aaKnown RBP12.53□□□□□ -0.4
CHMP3-204ENST00000409727 ATP13A3Q9H7F0 1226 aa12.53□□□□□ -0.4
CHMP3-204ENST00000409727 MRM3Q9HC36 420 aaKnown RBP12.53□□□□□ -0.4
CHMP3-204ENST00000409727 UNC80Q8N2C7 3258 aa12.52□□□□□ -0.4
CHMP3-204ENST00000409727 TMEM265A0A087WTH1 108 aa12.52□□□□□ -0.41
CHMP3-204ENST00000409727 A0A1W2PPC1 479 aa12.52□□□□□ -0.41
CHMP3-204ENST00000409727 MROH6A6NGR9 719 aa12.52□□□□□ -0.41
CHMP3-204ENST00000409727 OR51F1A6NGY5 319 aa12.52□□□□□ -0.41
CHMP3-204ENST00000409727 A8MX80 341 aa12.52□□□□□ -0.41
CHMP3-204ENST00000409727 KRT37O76014 449 aa12.52□□□□□ -0.41
CHMP3-204ENST00000409727 PGLSO95336 258 aa12.52□□□□□ -0.41
CHMP3-204ENST00000409727 MT-ND3P03897 115 aa12.52□□□□□ -0.41
CHMP3-204ENST00000409727 ATP5BP06576 529 aaKnown RBP12.52□□□□□ -0.41
CHMP3-204ENST00000409727 KCNA5P22460 613 aa12.52□□□□□ -0.41
CHMP3-204ENST00000409727 SERPINA4P29622 427 aa12.52□□□□□ -0.41
CHMP3-204ENST00000409727 GJA4P35212 333 aa12.52□□□□□ -0.41
CHMP3-204ENST00000409727 NNMTP40261 264 aa12.52□□□□□ -0.41
CHMP3-204ENST00000409727 RECQLP46063 649 aaPredicted RBP12.52□□□□□ -0.41
CHMP3-204ENST00000409727 GUCY1A3Q02108 690 aa12.52□□□□□ -0.41
CHMP3-204ENST00000409727 CTBP1Q13363 440 aa12.52□□□□□ -0.41
CHMP3-204ENST00000409727 THOC5Q13769 683 aaKnown RBP12.52□□□□□ -0.41
CHMP3-204ENST00000409727 RASA2Q15283 850 aa12.52□□□□□ -0.41
CHMP3-204ENST00000409727 QPCTQ16769 361 aa12.52□□□□□ -0.41
CHMP3-204ENST00000409727 PTPRNQ16849 979 aa12.52□□□□□ -0.41
CHMP3-204ENST00000409727 RALGPS1Q5JS13 557 aa12.52□□□□□ -0.41
CHMP3-204ENST00000409727 TEDDM1Q5T9Z0 273 aa12.52□□□□□ -0.41
CHMP3-204ENST00000409727 PDPK2PQ6A1A2 396 aa12.52□□□□□ -0.41
CHMP3-204ENST00000409727 PTAR1Q7Z6K3 402 aaPredicted RBP12.52□□□□□ -0.41
CHMP3-204ENST00000409727 DENND6AQ8IWF6 608 aa12.52□□□□□ -0.41
CHMP3-204ENST00000409727 PCDH20Q8N6Y1 951 aaKnown RBP12.52□□□□□ -0.41
CHMP3-204ENST00000409727 MDGA1Q8NFP4 955 aa12.52□□□□□ -0.41
CHMP3-204ENST00000409727 OR13C4Q8NGS5 318 aa12.52□□□□□ -0.41
CHMP3-204ENST00000409727 OR6P1Q8NGX9 317 aa12.52□□□□□ -0.41
CHMP3-204ENST00000409727 MZB1Q8WU39 189 aa12.52□□□□□ -0.41
CHMP3-204ENST00000409727 ISG20Q96AZ6 181 aaKnown RBP12.52□□□□□ -0.41
CHMP3-204ENST00000409727 SERAC1Q96JX3 654 aa12.52□□□□□ -0.41
CHMP3-204ENST00000409727 PKNOX2Q96KN3 472 aa12.52□□□□□ -0.41
CHMP3-204ENST00000409727 SMC6Q96SB8 1091 aa12.52□□□□□ -0.41
CHMP3-204ENST00000409727 CEP44Q9C0F1 390 aa12.52□□□□□ -0.41
CHMP3-204ENST00000409727 SUDS3Q9H7L9 328 aaPredicted RBP12.52□□□□□ -0.41
CHMP3-204ENST00000409727 MLXIPLQ9NP71 852 aa12.52□□□□□ -0.41
CHMP3-204ENST00000409727 ZDHHC4Q9NPG8 344 aa12.52□□□□□ -0.41
CHMP3-204ENST00000409727 GGT7Q9UJ14 662 aa12.52□□□□□ -0.41
CHMP3-204ENST00000409727 ZNF180Q9UJW8 692 aa12.52□□□□□ -0.41
CHMP3-204ENST00000409727 PLA2G4CQ9UP65 541 aa12.52□□□□□ -0.41
CHMP3-204ENST00000409727 FNDC3AQ9Y2H6 1198 aaKnown RBP12.52□□□□□ -0.41
CHMP3-204ENST00000409727 SPTBN5Q9NRC6 3674 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms