RNA–Protein interactions for RNA: ENST00000409129.2

NIF3L1-203, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 813 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-203ENST00000409129 IGFALSP35858 605 aa9.27□□□□□ -0.93
NIF3L1-203ENST00000409129 EIF4A3P38919 411 aaKnown RBP9.27□□□□□ -0.93
NIF3L1-203ENST00000409129 STAT1P42224 750 aa9.27□□□□□ -0.93
NIF3L1-203ENST00000409129 NSFP46459 744 aaKnown RBP9.27□□□□□ -0.93
NIF3L1-203ENST00000409129 KLK7P49862 253 aa9.27□□□□□ -0.93
NIF3L1-203ENST00000409129 GSCP56915 257 aaPredicted RBP9.27□□□□□ -0.93
NIF3L1-203ENST00000409129 YBEYP58557 167 aaPredicted RBP9.27□□□□□ -0.93
NIF3L1-203ENST00000409129 KLHL40Q2TBA0 621 aa9.27□□□□□ -0.93
NIF3L1-203ENST00000409129 C3orf38Q5JPI3 329 aa9.27□□□□□ -0.93
NIF3L1-203ENST00000409129 LRRC73Q5JTD7 316 aa9.27□□□□□ -0.93
NIF3L1-203ENST00000409129 PERM1Q5SV97 790 aa9.27□□□□□ -0.93
NIF3L1-203ENST00000409129 FAXCQ5TGI0 409 aa9.27□□□□□ -0.93
NIF3L1-203ENST00000409129 WDR59Q6PJI9 974 aa9.27□□□□□ -0.93
NIF3L1-203ENST00000409129 CRTC1Q6UUV9 634 aa9.27□□□□□ -0.93
NIF3L1-203ENST00000409129 RBM44Q6ZP01 1051 aaKnown RBP9.27□□□□□ -0.93
NIF3L1-203ENST00000409129 LAPTM4BQ86VI4 370 aa9.27□□□□□ -0.93
NIF3L1-203ENST00000409129 ZNF354CQ86Y25 554 aa9.27□□□□□ -0.93
NIF3L1-203ENST00000409129 SLC35F3Q8IY50 421 aa9.27□□□□□ -0.93
NIF3L1-203ENST00000409129 PHACTR4Q8IZ21 702 aa9.27□□□□□ -0.93
NIF3L1-203ENST00000409129 PYROXD2Q8N2H3 581 aa9.27□□□□□ -0.93
NIF3L1-203ENST00000409129 RTL3Q8N8U3 475 aaKnown RBP9.27□□□□□ -0.93
NIF3L1-203ENST00000409129 TP53I13Q8NBR0 393 aaPredicted RBP9.27□□□□□ -0.93
NIF3L1-203ENST00000409129 WDR48Q8TAF3 677 aa9.27□□□□□ -0.93
NIF3L1-203ENST00000409129 ENOX1Q8TC92 643 aaKnown RBP9.27□□□□□ -0.93
NIF3L1-203ENST00000409129 PCDHB18PQ96TA0 734 aa9.27□□□□□ -0.93
NIF3L1-203ENST00000409129 LRRC61Q9BV99 259 aa9.27□□□□□ -0.93
NIF3L1-203ENST00000409129 SELENOOQ9BVL4 669 aa9.27□□□□□ -0.93
NIF3L1-203ENST00000409129 CPEB1Q9BZB8 566 aaKnown RBP9.27□□□□□ -0.93
NIF3L1-203ENST00000409129 SLC13A1Q9BZW2 595 aa9.27□□□□□ -0.93
NIF3L1-203ENST00000409129 CLPBQ9H078 707 aa9.27□□□□□ -0.93
NIF3L1-203ENST00000409129 KLC2Q9H0B6 622 aa9.27□□□□□ -0.93
NIF3L1-203ENST00000409129 NUP62CLQ9H1M0 184 aa9.27□□□□□ -0.93
NIF3L1-203ENST00000409129 NOL6Q9H6R4 1146 aaKnown RBP9.27□□□□□ -0.93
NIF3L1-203ENST00000409129 NLRC4Q9NPP4 1024 aa9.27□□□□□ -0.93
NIF3L1-203ENST00000409129 MBNL1Q9NR56 388 aaKnown RBP9.27□□□□□ -0.93
NIF3L1-203ENST00000409129 FAM207AQ9NSI2 230 aaPredicted RBP9.27□□□□□ -0.93
NIF3L1-203ENST00000409129 CHMP5Q9NZZ3 219 aa9.27□□□□□ -0.93
NIF3L1-203ENST00000409129 ADAM22Q9P0K1 906 aa9.27□□□□□ -0.93
NIF3L1-203ENST00000409129 DKK3Q9UBP4 350 aa9.27□□□□□ -0.93
NIF3L1-203ENST00000409129 DAAM1Q9Y4D1 1078 aa9.27□□□□□ -0.93
NIF3L1-203ENST00000409129 PCDHGA8Q9Y5G5 932 aa9.27□□□□□ -0.93
NIF3L1-203ENST00000409129 ENTPD2Q9Y5L3 495 aa9.27□□□□□ -0.93
NIF3L1-203ENST00000409129 SIGLEC16A6NMB1 481 aa9.26□□□□□ -0.93
NIF3L1-203ENST00000409129 TMEM110-MUSTN1A8MSY1 372 aa9.26□□□□□ -0.93
NIF3L1-203ENST00000409129 RASA4BC9J798 803 aa9.26□□□□□ -0.93
NIF3L1-203ENST00000409129 EPHB6O15197 1021 aa9.26□□□□□ -0.93
NIF3L1-203ENST00000409129 RASA4O43374 803 aa9.26□□□□□ -0.93
NIF3L1-203ENST00000409129 CALB1P05937 261 aa9.26□□□□□ -0.93
NIF3L1-203ENST00000409129 TPM2P07951 284 aa9.26□□□□□ -0.93
NIF3L1-203ENST00000409129 TSHRP16473 764 aa9.26□□□□□ -0.93
NIF3L1-203ENST00000409129 XPAP23025 273 aaPredicted RBP9.26□□□□□ -0.93
NIF3L1-203ENST00000409129 EPHB2P29323 1055 aa9.26□□□□□ -0.93
NIF3L1-203ENST00000409129 PEX5P50542 639 aa9.26□□□□□ -0.93
NIF3L1-203ENST00000409129 BLKP51451 505 aa9.26□□□□□ -0.93
NIF3L1-203ENST00000409129 SUOXP51687 545 aa9.26□□□□□ -0.93
NIF3L1-203ENST00000409129 RHOAP61586 193 aa9.26□□□□□ -0.93
NIF3L1-203ENST00000409129 SKOR1P84550 965 aa9.26□□□□□ -0.93
NIF3L1-203ENST00000409129 PPARDQ03181 441 aa9.26□□□□□ -0.93
NIF3L1-203ENST00000409129 SERINC3Q13530 473 aa9.26□□□□□ -0.93
NIF3L1-203ENST00000409129 KRT31Q15323 416 aa9.26□□□□□ -0.93
NIF3L1-203ENST00000409129 ELOCQ15369 112 aa9.26□□□□□ -0.93
NIF3L1-203ENST00000409129 CYTH1Q15438 398 aa9.26□□□□□ -0.93
NIF3L1-203ENST00000409129 CLEC16AQ2KHT3 1053 aa9.26□□□□□ -0.93
NIF3L1-203ENST00000409129 TMEM52BQ4KMG9 183 aa9.26□□□□□ -0.93
NIF3L1-203ENST00000409129 FKBP15Q5T1M5 1219 aa9.26□□□□□ -0.93
NIF3L1-203ENST00000409129 CDKAL1Q5VV42 579 aa9.26□□□□□ -0.93
NIF3L1-203ENST00000409129 ESRP1Q6NXG1 681 aaKnown RBP9.26□□□□□ -0.93
NIF3L1-203ENST00000409129 SCYL2Q6P3W7 929 aa9.26□□□□□ -0.93
NIF3L1-203ENST00000409129 MACC1Q6ZN28 852 aa9.26□□□□□ -0.93
NIF3L1-203ENST00000409129 ZNF574Q6ZN55 896 aaPredicted RBP9.26□□□□□ -0.93
NIF3L1-203ENST00000409129 PHF13Q86YI8 300 aaPredicted RBP9.26□□□□□ -0.93
NIF3L1-203ENST00000409129 NETO2Q8NC67 525 aa9.26□□□□□ -0.93
NIF3L1-203ENST00000409129 C3orf20Q8ND61 904 aa9.26□□□□□ -0.93
NIF3L1-203ENST00000409129 HCAR2Q8TDS4 363 aa9.26□□□□□ -0.93
NIF3L1-203ENST00000409129 NAT6Q93015 286 aa9.26□□□□□ -0.93
NIF3L1-203ENST00000409129 CCDC97Q96F63 343 aaPredicted RBP9.26□□□□□ -0.93
NIF3L1-203ENST00000409129 HMCESQ96FZ2 354 aa9.26□□□□□ -0.93
NIF3L1-203ENST00000409129 PRR11Q96HE9 360 aaPredicted RBP9.26□□□□□ -0.93
NIF3L1-203ENST00000409129 CCDC3Q9BQI4 270 aa9.26□□□□□ -0.93
NIF3L1-203ENST00000409129 WRAP53Q9BUR4 548 aaKnown RBP9.26□□□□□ -0.93
NIF3L1-203ENST00000409129 PADI4Q9UM07 663 aa9.26□□□□□ -0.93
NIF3L1-203ENST00000409129 SRPK3Q9UPE1 567 aa9.26□□□□□ -0.93
NIF3L1-203ENST00000409129 C2CD3Q4AC94 2353 aa9.26□□□□□ -0.93
NIF3L1-203ENST00000409129 CHD5Q8TDI0 1954 aa9.25□□□□□ -0.93
NIF3L1-203ENST00000409129 WASH4PA8MWX3 477 aa9.25□□□□□ -0.93
NIF3L1-203ENST00000409129 CDRT15L2A8MXV6 281 aa9.25□□□□□ -0.93
NIF3L1-203ENST00000409129 CASC3O15234 703 aaKnown RBP9.25□□□□□ -0.93
NIF3L1-203ENST00000409129 INSIG1O15503 277 aa9.25□□□□□ -0.93
NIF3L1-203ENST00000409129 CCP110O43303 1012 aa9.25□□□□□ -0.93
NIF3L1-203ENST00000409129 CREB3O43889 395 aa9.25□□□□□ -0.93
NIF3L1-203ENST00000409129 CTSEP14091 401 aa9.25□□□□□ -0.93
NIF3L1-203ENST00000409129 ZNF143P52747 638 aaPredicted RBP9.25□□□□□ -0.93
NIF3L1-203ENST00000409129 HK3P52790 923 aa9.25□□□□□ -0.93
NIF3L1-203ENST00000409129 ELP6Q0PNE2 266 aa9.25□□□□□ -0.93
NIF3L1-203ENST00000409129 UBAP2LQ14157 1087 aaKnown RBP9.25□□□□□ -0.93
NIF3L1-203ENST00000409129 GRM3Q14832 879 aa9.25□□□□□ -0.93
NIF3L1-203ENST00000409129 LRRC14Q15048 493 aa9.25□□□□□ -0.93
NIF3L1-203ENST00000409129 IRF4Q15306 451 aa9.25□□□□□ -0.93
NIF3L1-203ENST00000409129 WSCD2Q2TBF2 565 aa9.25□□□□□ -0.93
NIF3L1-203ENST00000409129 PARP15Q460N3 678 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms