RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 SLC13A1Q9BZW2 595 aa13.05□□□□□ -0.32
SMARCB1-203ENST00000407082 NOD2Q9HC29 1040 aa13.05□□□□□ -0.32
SMARCB1-203ENST00000407082 IL37Q9NZH6 218 aa13.05□□□□□ -0.32
SMARCB1-203ENST00000407082 RPS6KL1Q9Y6S9 549 aa13.05□□□□□ -0.32
SMARCB1-203ENST00000407082 ZFYVE26Q68DK2 2539 aa13.05□□□□□ -0.32
SMARCB1-203ENST00000407082 A0A1W2PRU2 124 aa13.04□□□□□ -0.32
SMARCB1-203ENST00000407082 IRAK2O43187 625 aa13.04□□□□□ -0.32
SMARCB1-203ENST00000407082 LRIG2O94898 1065 aa13.04□□□□□ -0.32
SMARCB1-203ENST00000407082 F11P03951 625 aa13.04□□□□□ -0.32
SMARCB1-203ENST00000407082 CALB2P22676 271 aa13.04□□□□□ -0.32
SMARCB1-203ENST00000407082 TYK2P29597 1187 aa13.04□□□□□ -0.32
SMARCB1-203ENST00000407082 CDC25CP30307 473 aa13.04□□□□□ -0.32
SMARCB1-203ENST00000407082 CNR2P34972 360 aa13.04□□□□□ -0.32
SMARCB1-203ENST00000407082 CCR2P41597 374 aa13.04□□□□□ -0.32
SMARCB1-203ENST00000407082 PITX1P78337 314 aaPredicted RBP13.04□□□□□ -0.32
SMARCB1-203ENST00000407082 MTM1Q13496 603 aa13.04□□□□□ -0.32
SMARCB1-203ENST00000407082 FAM78AQ5JUQ0 283 aa13.04□□□□□ -0.32
SMARCB1-203ENST00000407082 WASHC2DQ5SRD0 308 aa13.04□□□□□ -0.32
SMARCB1-203ENST00000407082 STPG1Q5TH74 334 aa13.04□□□□□ -0.32
SMARCB1-203ENST00000407082 MAMSTRQ6ZN01 415 aa13.04□□□□□ -0.32
SMARCB1-203ENST00000407082 TMEM135Q86UB9 458 aa13.04□□□□□ -0.32
SMARCB1-203ENST00000407082 TAC4Q86UU9 113 aa13.04□□□□□ -0.32
SMARCB1-203ENST00000407082 LONP2Q86WA8 852 aa13.04□□□□□ -0.32
SMARCB1-203ENST00000407082 MPP5Q8N3R9 675 aa13.04□□□□□ -0.32
SMARCB1-203ENST00000407082 ATPAF2Q8N5M1 289 aa13.04□□□□□ -0.32
SMARCB1-203ENST00000407082 ARMC2Q8NEN0 867 aa13.04□□□□□ -0.32
SMARCB1-203ENST00000407082 DQX1Q8TE96 717 aaKnown RBP13.04□□□□□ -0.32
SMARCB1-203ENST00000407082 SPOCK2Q92563 424 aa13.04□□□□□ -0.32
SMARCB1-203ENST00000407082 C1orf74Q96LT6 269 aa13.04□□□□□ -0.32
SMARCB1-203ENST00000407082 ANKRD27Q96NW4 1050 aa13.04□□□□□ -0.32
SMARCB1-203ENST00000407082 GCNAQ96QF7 691 aa13.04□□□□□ -0.32
SMARCB1-203ENST00000407082 IER2Q9BTL4 223 aa13.04□□□□□ -0.32
SMARCB1-203ENST00000407082 TMEM120AQ9BXJ8 343 aa13.04□□□□□ -0.32
SMARCB1-203ENST00000407082 ATXN3LQ9H3M9 355 aa13.04□□□□□ -0.32
SMARCB1-203ENST00000407082 IL21Q9HBE4 155 aa13.04□□□□□ -0.32
SMARCB1-203ENST00000407082 SMYD2Q9NRG4 433 aa13.04□□□□□ -0.32
SMARCB1-203ENST00000407082 RXFP3Q9NSD7 469 aa13.04□□□□□ -0.32
SMARCB1-203ENST00000407082 OLA1Q9NTK5 396 aaKnown RBP13.04□□□□□ -0.32
SMARCB1-203ENST00000407082 PCMTD2Q9NV79 361 aa13.04□□□□□ -0.32
SMARCB1-203ENST00000407082 SYBUQ9NX95 663 aa13.04□□□□□ -0.32
SMARCB1-203ENST00000407082 HEY2Q9UBP5 337 aa13.04□□□□□ -0.32
SMARCB1-203ENST00000407082 GGT7Q9UJ14 662 aa13.04□□□□□ -0.32
SMARCB1-203ENST00000407082 SCML2Q9UQR0 700 aa13.04□□□□□ -0.32
SMARCB1-203ENST00000407082 ANKRD6Q9Y2G4 727 aa13.04□□□□□ -0.32
SMARCB1-203ENST00000407082 MYO18AQ92614 2054 aaKnown RBP13.04□□□□□ -0.32
SMARCB1-203ENST00000407082 A0A0G2JND7 137 aa13.03□□□□□ -0.32
SMARCB1-203ENST00000407082 FAM92AA1XBS5 289 aa13.03□□□□□ -0.32
SMARCB1-203ENST00000407082 ZBTB24O43167 697 aaPredicted RBP13.03□□□□□ -0.32
SMARCB1-203ENST00000407082 KCNK5O95279 499 aa13.03□□□□□ -0.32
SMARCB1-203ENST00000407082 IGLV3-25P01717 112 aa13.03□□□□□ -0.32
SMARCB1-203ENST00000407082 ITGA2BP08514 1039 aa13.03□□□□□ -0.32
SMARCB1-203ENST00000407082 GJA1P17302 382 aa13.03□□□□□ -0.32
SMARCB1-203ENST00000407082 PAMP19021 973 aa13.03□□□□□ -0.32
SMARCB1-203ENST00000407082 HOXC13P31276 330 aa13.03□□□□□ -0.32
SMARCB1-203ENST00000407082 PPP3CCP48454 512 aa13.03□□□□□ -0.32
SMARCB1-203ENST00000407082 PSEN1P49768 467 aa13.03□□□□□ -0.32
SMARCB1-203ENST00000407082 HK2P52789 917 aa13.03□□□□□ -0.32
SMARCB1-203ENST00000407082 ASPHQ12797 758 aa13.03□□□□□ -0.32
SMARCB1-203ENST00000407082 CHI3L2Q15782 390 aa13.03□□□□□ -0.32
SMARCB1-203ENST00000407082 TAF1BQ53T94 588 aaPredicted RBP13.03□□□□□ -0.32
SMARCB1-203ENST00000407082 PRSS36Q5K4E3 855 aa13.03□□□□□ -0.32
SMARCB1-203ENST00000407082 KCTD11Q693B1 232 aa13.03□□□□□ -0.32
SMARCB1-203ENST00000407082 PDPK2PQ6A1A2 396 aa13.03□□□□□ -0.32
SMARCB1-203ENST00000407082 PSAPL1Q6NUJ1 521 aa13.03□□□□□ -0.32
SMARCB1-203ENST00000407082 TRMT10BQ6PF06 316 aaKnown RBP13.03□□□□□ -0.32
SMARCB1-203ENST00000407082 POTEHQ6S545 545 aa13.03□□□□□ -0.32
SMARCB1-203ENST00000407082 UNQ6494/PRO21346Q6UXR6 183 aa13.03□□□□□ -0.32
SMARCB1-203ENST00000407082 BHLHA9Q7RTU4 235 aa13.03□□□□□ -0.32
SMARCB1-203ENST00000407082 CLNKQ7Z7G1 428 aa13.03□□□□□ -0.32
SMARCB1-203ENST00000407082 TMEM150AQ86TG1 271 aa13.03□□□□□ -0.32
SMARCB1-203ENST00000407082 MTDHQ86UE4 582 aaKnown RBP13.03□□□□□ -0.32
SMARCB1-203ENST00000407082 MON1AQ86VX9 555 aa13.03□□□□□ -0.32
SMARCB1-203ENST00000407082 KLHDC8BQ8IXV7 354 aa13.03□□□□□ -0.32
SMARCB1-203ENST00000407082 ZNF687Q8N1G0 1237 aa13.03□□□□□ -0.32
SMARCB1-203ENST00000407082 SPEM1Q8N4L4 309 aa13.03□□□□□ -0.32
SMARCB1-203ENST00000407082 PDZD8Q8NEN9 1154 aa13.03□□□□□ -0.32
SMARCB1-203ENST00000407082 SHKBP1Q8TBC3 707 aa13.03□□□□□ -0.32
SMARCB1-203ENST00000407082 OVCA2Q8WZ82 227 aa13.03□□□□□ -0.32
SMARCB1-203ENST00000407082 EDEM1Q92611 657 aa13.03□□□□□ -0.32
SMARCB1-203ENST00000407082 FATE1Q969F0 183 aa13.03□□□□□ -0.32
SMARCB1-203ENST00000407082 ZNF669Q96BR6 464 aaPredicted RBP13.03□□□□□ -0.32
SMARCB1-203ENST00000407082 FCRL5Q96RD9 977 aa13.03□□□□□ -0.32
SMARCB1-203ENST00000407082 MAGEB5Q9BZ81 275 aa13.03□□□□□ -0.32
SMARCB1-203ENST00000407082 SMOC1Q9H4F8 434 aa13.03□□□□□ -0.32
SMARCB1-203ENST00000407082 MRM3Q9HC36 420 aaKnown RBP13.03□□□□□ -0.32
SMARCB1-203ENST00000407082 TRPM5Q9NZQ8 1165 aa13.03□□□□□ -0.32
SMARCB1-203ENST00000407082 GMIPQ9P107 970 aa13.03□□□□□ -0.32
SMARCB1-203ENST00000407082 SOX13Q9UN79 622 aa13.03□□□□□ -0.32
SMARCB1-203ENST00000407082 MFHAS1Q9Y4C4 1052 aa13.03□□□□□ -0.32
SMARCB1-203ENST00000407082 GREB1Q4ZG55 1949 aa13.03□□□□□ -0.32
SMARCB1-203ENST00000407082 NOTCH4Q99466 2003 aa13.02□□□□□ -0.33
SMARCB1-203ENST00000407082 WASH4PA8MWX3 477 aa13.02□□□□□ -0.33
SMARCB1-203ENST00000407082 FAM72CH0Y354 149 aa13.02□□□□□ -0.33
SMARCB1-203ENST00000407082 NRG2O14511 850 aaPredicted RBP13.02□□□□□ -0.33
SMARCB1-203ENST00000407082 MATN3O15232 486 aa13.02□□□□□ -0.33
SMARCB1-203ENST00000407082 CACNG3O60359 315 aa13.02□□□□□ -0.33
SMARCB1-203ENST00000407082 MOSPD3O75425 235 aa13.02□□□□□ -0.33
SMARCB1-203ENST00000407082 SNUPNO95149 360 aaKnown RBP13.02□□□□□ -0.33
SMARCB1-203ENST00000407082 DLDP09622 509 aaKnown RBP13.02□□□□□ -0.33
SMARCB1-203ENST00000407082 CHRNB1P11230 501 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms