RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 DDIASQ8IXT1 998 aa17.18■□□□□ 0.34
PTPRA-205ENST00000399903 OR2T34Q8NGX1 318 aa17.18■□□□□ 0.34
PTPRA-205ENST00000399903 OR2T3Q8NH03 318 aa17.18■□□□□ 0.34
PTPRA-205ENST00000399903 HTRA1Q92743 480 aa17.18■□□□□ 0.34
PTPRA-205ENST00000399903 PHF21BQ96EK2 531 aa17.18■□□□□ 0.34
PTPRA-205ENST00000399903 MCRS1Q96EZ8 462 aa17.18■□□□□ 0.34
PTPRA-205ENST00000399903 PTPRHQ9HD43 1115 aa17.18■□□□□ 0.34
PTPRA-205ENST00000399903 TMPRSS4Q9NRS4 437 aa17.18■□□□□ 0.34
PTPRA-205ENST00000399903 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.18■□□□□ 0.34
PTPRA-205ENST00000399903 TSPAN16Q9UKR8 245 aa17.18■□□□□ 0.34
PTPRA-205ENST00000399903 H3BRB1 525 aa17.18■□□□□ 0.34
PTPRA-205ENST00000399903 CLPXO76031 633 aa17.18■□□□□ 0.34
PTPRA-205ENST00000399903 C8BP07358 591 aa17.18■□□□□ 0.34
PTPRA-205ENST00000399903 CYP2C9P11712 490 aa17.18■□□□□ 0.34
PTPRA-205ENST00000399903 YWHAQP27348 245 aa17.18■□□□□ 0.34
PTPRA-205ENST00000399903 LIMK2P53671 638 aa17.18■□□□□ 0.34
PTPRA-205ENST00000399903 SEMA5AQ13591 1074 aa17.18■□□□□ 0.34
PTPRA-205ENST00000399903 CYP51A1Q16850 503 aa17.18■□□□□ 0.34
PTPRA-205ENST00000399903 CLIP4Q8N3C7 705 aa17.18■□□□□ 0.34
PTPRA-205ENST00000399903 FSTL5Q8N475 847 aaPredicted RBP17.18■□□□□ 0.34
PTPRA-205ENST00000399903 BRI3BPQ8WY22 251 aa17.18■□□□□ 0.34
PTPRA-205ENST00000399903 EXT2Q93063 718 aa17.18■□□□□ 0.34
PTPRA-205ENST00000399903 TMEM176AQ96HP8 235 aa17.18■□□□□ 0.34
PTPRA-205ENST00000399903 MARCH7Q9H992 704 aa17.18■□□□□ 0.34
PTPRA-205ENST00000399903 CHRAC1Q9NRG0 131 aa17.18■□□□□ 0.34
PTPRA-205ENST00000399903 VPS28Q9UK41 221 aa17.18■□□□□ 0.34
PTPRA-205ENST00000399903 NOX1Q9Y5S8 564 aa17.18■□□□□ 0.34
PTPRA-205ENST00000399903 CPQQ9Y646 472 aa17.18■□□□□ 0.34
PTPRA-205ENST00000399903 A0A0A0MRY4 1105 aa17.18■□□□□ 0.34
PTPRA-205ENST00000399903 SOBPA7XYQ1 873 aa17.18■□□□□ 0.34
PTPRA-205ENST00000399903 PFDN6O15212 129 aa17.18■□□□□ 0.34
PTPRA-205ENST00000399903 GPD2P43304 727 aa17.18■□□□□ 0.34
PTPRA-205ENST00000399903 NT5DC4Q86YG4 428 aa17.18■□□□□ 0.34
PTPRA-205ENST00000399903 EPHX4Q8IUS5 362 aa17.18■□□□□ 0.34
PTPRA-205ENST00000399903 TRUB1Q8WWH5 349 aaKnown RBP17.18■□□□□ 0.34
PTPRA-205ENST00000399903 SPATA13Q96N96 652 aa17.18■□□□□ 0.34
PTPRA-205ENST00000399903 MROH8Q9H579 483 aa17.18■□□□□ 0.34
PTPRA-205ENST00000399903 BFARQ9NZS9 450 aa17.18■□□□□ 0.34
PTPRA-205ENST00000399903 AP3B1O00203 1094 aa17.17■□□□□ 0.34
PTPRA-205ENST00000399903 SNAP91O60641 907 aa17.17■□□□□ 0.34
PTPRA-205ENST00000399903 CHRM3P20309 590 aa17.17■□□□□ 0.34
PTPRA-205ENST00000399903 S100A1P23297 94 aa17.17■□□□□ 0.34
PTPRA-205ENST00000399903 PSMA4P25789 261 aaKnown RBP17.17■□□□□ 0.34
PTPRA-205ENST00000399903 DCKP27707 260 aa17.17■□□□□ 0.34
PTPRA-205ENST00000399903 OXTRP30559 389 aa17.17■□□□□ 0.34
PTPRA-205ENST00000399903 PTPN9P43378 593 aa17.17■□□□□ 0.34
PTPRA-205ENST00000399903 SLC10A6Q3KNW5 377 aa17.17■□□□□ 0.34
PTPRA-205ENST00000399903 SAMD4BQ5PRF9 694 aaKnown RBP17.17■□□□□ 0.34
PTPRA-205ENST00000399903 ERMP1Q7Z2K6 904 aa17.17■□□□□ 0.34
PTPRA-205ENST00000399903 SAPCD2Q86UD0 394 aa17.17■□□□□ 0.34
PTPRA-205ENST00000399903 KCNMB4Q86W47 210 aa17.17■□□□□ 0.34
PTPRA-205ENST00000399903 GIMAP2Q9UG22 337 aa17.17■□□□□ 0.34
PTPRA-205ENST00000399903 CDH7Q9ULB5 785 aa17.17■□□□□ 0.34
PTPRA-205ENST00000399903 HTTP42858 3142 aa17.17■□□□□ 0.34
PTPRA-205ENST00000399903 SBF1O95248 1867 aa17.17■□□□□ 0.34
PTPRA-205ENST00000399903 PTGES3LE9PB15 166 aa17.17■□□□□ 0.34
PTPRA-205ENST00000399903 SYNCRIPO60506 623 aaKnown RBP17.17■□□□□ 0.34
PTPRA-205ENST00000399903 ALDH1A2O94788 518 aa17.17■□□□□ 0.34
PTPRA-205ENST00000399903 DDHD2O94830 711 aa17.17■□□□□ 0.34
PTPRA-205ENST00000399903 SNAI1O95863 264 aaPredicted RBP17.17■□□□□ 0.34
PTPRA-205ENST00000399903 HPCAL1P37235 193 aa17.17■□□□□ 0.34
PTPRA-205ENST00000399903 CLCQ05315 142 aa17.17■□□□□ 0.34
PTPRA-205ENST00000399903 TIGD2Q4W5G0 525 aa17.17■□□□□ 0.34
PTPRA-205ENST00000399903 ZNF280DQ6N043 979 aa17.17■□□□□ 0.34
PTPRA-205ENST00000399903 KDELC2Q7Z4H8 507 aa17.17■□□□□ 0.34
PTPRA-205ENST00000399903 NXNL1Q96CM4 212 aa17.17■□□□□ 0.34
PTPRA-205ENST00000399903 P2RY11Q96G91 374 aa17.17■□□□□ 0.34
PTPRA-205ENST00000399903 LHX5Q9H2C1 402 aa17.17■□□□□ 0.34
PTPRA-205ENST00000399903 PDZD7Q9H5P4 517 aa17.17■□□□□ 0.34
PTPRA-205ENST00000399903 CHST12Q9NRB3 414 aa17.17■□□□□ 0.34
PTPRA-205ENST00000399903 SEPT3Q9UH03 358 aa17.17■□□□□ 0.34
PTPRA-205ENST00000399903 IPO11Q9UI26 975 aaKnown RBP17.17■□□□□ 0.34
PTPRA-205ENST00000399903 CPA4Q9UI42 421 aa17.17■□□□□ 0.34
PTPRA-205ENST00000399903 MRPL42Q9Y6G3 142 aaKnown RBP17.17■□□□□ 0.34
PTPRA-205ENST00000399903 DLX3O60479 287 aa17.16■□□□□ 0.34
PTPRA-205ENST00000399903 ENDOD1O94919 500 aa17.16■□□□□ 0.34
PTPRA-205ENST00000399903 SNRPB2P08579 225 aaKnown RBP17.16■□□□□ 0.34
PTPRA-205ENST00000399903 SMPD1P17405 629 aa17.16■□□□□ 0.34
PTPRA-205ENST00000399903 NR4A2P43354 598 aa17.16■□□□□ 0.34
PTPRA-205ENST00000399903 MCCD1P59942 119 aaPredicted RBP17.16■□□□□ 0.34
PTPRA-205ENST00000399903 CREB5Q02930 508 aa17.16■□□□□ 0.34
PTPRA-205ENST00000399903 TNK2Q07912 1038 aa17.16■□□□□ 0.34
PTPRA-205ENST00000399903 DEPDC1Q5TB30 811 aa17.16■□□□□ 0.34
PTPRA-205ENST00000399903 CLEC6AQ6EIG7 209 aa17.16■□□□□ 0.34
PTPRA-205ENST00000399903 CLEC4CQ8WTT0 213 aa17.16■□□□□ 0.34
PTPRA-205ENST00000399903 RTP4Q96DX8 246 aa17.16■□□□□ 0.34
PTPRA-205ENST00000399903 NRBF2Q96F24 287 aa17.16■□□□□ 0.34
PTPRA-205ENST00000399903 C2orf40Q9H1Z8 148 aa17.16■□□□□ 0.34
PTPRA-205ENST00000399903 MRPL40Q9NQ50 206 aaKnown RBP17.16■□□□□ 0.34
PTPRA-205ENST00000399903 KLK14Q9P0G3 267 aa17.16■□□□□ 0.34
PTPRA-205ENST00000399903 VANGL2Q9ULK5 521 aa17.16■□□□□ 0.34
PTPRA-205ENST00000399903 SDHDO14521 159 aa17.16■□□□□ 0.34
PTPRA-205ENST00000399903 INHBBP09529 407 aa17.16■□□□□ 0.34
PTPRA-205ENST00000399903 LCP1P13796 627 aa17.16■□□□□ 0.34
PTPRA-205ENST00000399903 MYF6P23409 242 aa17.16■□□□□ 0.34
PTPRA-205ENST00000399903 PAGE2BQ5JRK9 111 aa17.16■□□□□ 0.34
PTPRA-205ENST00000399903 HEATR4Q86WZ0 1026 aa17.16■□□□□ 0.34
PTPRA-205ENST00000399903 CMTR2Q8IYT2 770 aaKnown RBP17.16■□□□□ 0.34
PTPRA-205ENST00000399903 TTC16Q8NEE8 873 aa17.16■□□□□ 0.34
PTPRA-205ENST00000399903 ABHD11Q8NFV4 315 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms