RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 WDR24Q96S15 920 aa17.79■□□□□ 0.44
CTNS-203ENST00000399306 SRPK1Q96SB4 655 aaKnown RBP17.79■□□□□ 0.44
CTNS-203ENST00000399306 ADGRE3Q9BY15 652 aa17.79■□□□□ 0.44
CTNS-203ENST00000399306 GBA3Q9H227 469 aa17.79■□□□□ 0.44
CTNS-203ENST00000399306 PCDH12Q9NPG4 1184 aa17.79■□□□□ 0.44
CTNS-203ENST00000399306 KCTD5Q9NXV2 234 aa17.79■□□□□ 0.44
CTNS-203ENST00000399306 RNF14Q9UBS8 474 aa17.79■□□□□ 0.44
CTNS-203ENST00000399306 FAM153AQ9UHL3 310 aa17.79■□□□□ 0.44
CTNS-203ENST00000399306 PCDHB9Q9Y5E1 797 aa17.79■□□□□ 0.44
CTNS-203ENST00000399306 ANXA9O76027 345 aa17.78■□□□□ 0.44
CTNS-203ENST00000399306 GNSP15586 552 aa17.78■□□□□ 0.44
CTNS-203ENST00000399306 CD86P42081 329 aa17.78■□□□□ 0.44
CTNS-203ENST00000399306 GRIA4P48058 902 aa17.78■□□□□ 0.44
CTNS-203ENST00000399306 ETF1P62495 437 aaKnown RBP17.78■□□□□ 0.44
CTNS-203ENST00000399306 MPP3Q13368 585 aa17.78■□□□□ 0.44
CTNS-203ENST00000399306 IHHQ14623 411 aa17.78■□□□□ 0.44
CTNS-203ENST00000399306 AGERQ15109 404 aa17.78■□□□□ 0.44
CTNS-203ENST00000399306 P3H1Q32P28 736 aa17.78■□□□□ 0.44
CTNS-203ENST00000399306 ANKRD20A2Q5SQ80 823 aa17.78■□□□□ 0.44
CTNS-203ENST00000399306 ANKRD20A1Q5TYW2 823 aa17.78■□□□□ 0.44
CTNS-203ENST00000399306 ANKRD20A3Q5VUR7 823 aa17.78■□□□□ 0.44
CTNS-203ENST00000399306 C4orf22Q6V702 233 aa17.78■□□□□ 0.44
CTNS-203ENST00000399306 DPPA4Q7L190 304 aa17.78■□□□□ 0.44
CTNS-203ENST00000399306 ZSWIM9Q86XI8 627 aa17.78■□□□□ 0.44
CTNS-203ENST00000399306 C1orf216Q8TAB5 229 aa17.78■□□□□ 0.44
CTNS-203ENST00000399306 PIH1D2Q8WWB5 315 aa17.78■□□□□ 0.44
CTNS-203ENST00000399306 LENG8Q96PV6 779 aaPredicted RBP17.78■□□□□ 0.44
CTNS-203ENST00000399306 LYSMD1Q96S90 227 aa17.78■□□□□ 0.44
CTNS-203ENST00000399306 ORAI3Q9BRQ5 295 aa17.78■□□□□ 0.44
CTNS-203ENST00000399306 C1QTNF2Q9BXJ5 285 aa17.78■□□□□ 0.44
CTNS-203ENST00000399306 PCDH9Q9HC56 1237 aa17.78■□□□□ 0.44
CTNS-203ENST00000399306 NCDNQ9UBB6 729 aa17.78■□□□□ 0.44
CTNS-203ENST00000399306 AAR2Q9Y312 384 aaKnown RBP17.78■□□□□ 0.44
CTNS-203ENST00000399306 A0A1B0GTW7 788 aa17.77■□□□□ 0.44
CTNS-203ENST00000399306 A0A1W2PQU0 124 aa17.77■□□□□ 0.44
CTNS-203ENST00000399306 TTC24A2A3L6 582 aaPredicted RBP17.77■□□□□ 0.44
CTNS-203ENST00000399306 FAM47DPA6NHR8 397 aa17.77■□□□□ 0.44
CTNS-203ENST00000399306 PSMD11O00231 422 aa17.77■□□□□ 0.44
CTNS-203ENST00000399306 NEMP1O14524 444 aa17.77■□□□□ 0.44
CTNS-203ENST00000399306 FSBPO95073 299 aa17.77■□□□□ 0.44
CTNS-203ENST00000399306 PCDH8O95206 1070 aa17.77■□□□□ 0.44
CTNS-203ENST00000399306 PRLP01236 227 aa17.77■□□□□ 0.44
CTNS-203ENST00000399306 CYP2A6P11509 494 aaPredicted RBP17.77■□□□□ 0.44
CTNS-203ENST00000399306 NFKB1P19838 968 aa17.77■□□□□ 0.44
CTNS-203ENST00000399306 ITPKAP23677 461 aa17.77■□□□□ 0.44
CTNS-203ENST00000399306 PLA2G5P39877 138 aa17.77■□□□□ 0.44
CTNS-203ENST00000399306 MPLP40238 635 aa17.77■□□□□ 0.44
CTNS-203ENST00000399306 RACK1P63244 317 aaKnown RBP17.77■□□□□ 0.44
CTNS-203ENST00000399306 CREB5Q02930 508 aa17.77■□□□□ 0.44
CTNS-203ENST00000399306 LMNB2Q03252 620 aa17.77■□□□□ 0.44
CTNS-203ENST00000399306 CYP1B1Q16678 543 aa17.77■□□□□ 0.44
CTNS-203ENST00000399306 DUOXA1Q1HG43 343 aa17.77■□□□□ 0.44
CTNS-203ENST00000399306 ZNF284Q2VY69 593 aa17.77■□□□□ 0.44
CTNS-203ENST00000399306 USP45Q70EL2 814 aa17.77■□□□□ 0.44
CTNS-203ENST00000399306 B4GALNT4Q76KP1 1039 aa17.77■□□□□ 0.44
CTNS-203ENST00000399306 ASCL5Q7RTU5 278 aa17.77■□□□□ 0.44
CTNS-203ENST00000399306 PAF1Q8N7H5 531 aa17.77■□□□□ 0.44
CTNS-203ENST00000399306 C12orf50Q8NA57 414 aaPredicted RBP17.77■□□□□ 0.44
CTNS-203ENST00000399306 DENND6BQ8NEG7 585 aa17.77■□□□□ 0.44
CTNS-203ENST00000399306 TRIB3Q96RU7 358 aa17.77■□□□□ 0.44
CTNS-203ENST00000399306 RBM15Q96T37 977 aaKnown RBP eCLIP17.77■□□□□ 0.44
CTNS-203ENST00000399306 PHOX2BQ99453 314 aa17.77■□□□□ 0.44
CTNS-203ENST00000399306 FAM118BQ9BPY3 351 aa17.77■□□□□ 0.44
CTNS-203ENST00000399306 CEP41Q9BYV8 373 aa17.77■□□□□ 0.44
CTNS-203ENST00000399306 RSPH14Q9UHP6 348 aa17.77■□□□□ 0.44
CTNS-203ENST00000399306 ZFR2Q9UPR6 939 aaKnown RBP17.77■□□□□ 0.44
CTNS-203ENST00000399306 ZNF148Q9UQR1 794 aa17.77■□□□□ 0.44
CTNS-203ENST00000399306 SAR1BQ9Y6B6 198 aa17.77■□□□□ 0.44
CTNS-203ENST00000399306 A0A0J9YYE9 177 aa17.76■□□□□ 0.43
CTNS-203ENST00000399306 GOLGA6CA6NDK9 693 aa17.76■□□□□ 0.43
CTNS-203ENST00000399306 GOLGA6BA6NDN3 693 aa17.76■□□□□ 0.43
CTNS-203ENST00000399306 PRAMEF26H0Y7S4 382 aa17.76■□□□□ 0.43
CTNS-203ENST00000399306 TRBC1P01850 177 aa17.76■□□□□ 0.43
CTNS-203ENST00000399306 ZNF806P0C7X5 589 aa17.76■□□□□ 0.43
CTNS-203ENST00000399306 GOLGA6DP0CG33 693 aa17.76■□□□□ 0.43
CTNS-203ENST00000399306 ZNF30P17039 623 aa17.76■□□□□ 0.43
CTNS-203ENST00000399306 GEMP55040 296 aa17.76■□□□□ 0.43
CTNS-203ENST00000399306 PPP2CBP62714 309 aa17.76■□□□□ 0.43
CTNS-203ENST00000399306 PPP2CAP67775 309 aa17.76■□□□□ 0.43
CTNS-203ENST00000399306 CDK18Q07002 472 aa17.76■□□□□ 0.43
CTNS-203ENST00000399306 OVGP1Q12889 678 aa17.76■□□□□ 0.43
CTNS-203ENST00000399306 PRPSAP1Q14558 356 aa17.76■□□□□ 0.43
CTNS-203ENST00000399306 LPAL2Q16609 132 aa17.76■□□□□ 0.43
CTNS-203ENST00000399306 PARP6Q2NL67 630 aa17.76■□□□□ 0.43
CTNS-203ENST00000399306 NAPEPLDQ6IQ20 393 aa17.76■□□□□ 0.43
CTNS-203ENST00000399306 SLC23A3Q6PIS1 610 aa17.76■□□□□ 0.43
CTNS-203ENST00000399306 KDELC1Q6UW63 502 aa17.76■□□□□ 0.43
CTNS-203ENST00000399306 ADAT2Q7Z6V5 191 aaKnown RBP17.76■□□□□ 0.43
CTNS-203ENST00000399306 IQCHQ86VS3 1027 aa17.76■□□□□ 0.43
CTNS-203ENST00000399306 RGL4Q8IZJ4 473 aa17.76■□□□□ 0.43
CTNS-203ENST00000399306 CXorf40AQ8TE69 158 aa17.76■□□□□ 0.43
CTNS-203ENST00000399306 COG1Q8WTW3 980 aa17.76■□□□□ 0.43
CTNS-203ENST00000399306 PDCD6IPQ8WUM4 868 aaKnown RBP17.76■□□□□ 0.43
CTNS-203ENST00000399306 ATG4AQ8WYN0 398 aa17.76■□□□□ 0.43
CTNS-203ENST00000399306 LRRC45Q96CN5 670 aa17.76■□□□□ 0.43
CTNS-203ENST00000399306 FAM122AQ96E09 287 aa17.76■□□□□ 0.43
CTNS-203ENST00000399306 TMEM121Q9BTD3 319 aa17.76■□□□□ 0.43
CTNS-203ENST00000399306 C1QTNF7Q9BXJ2 289 aa17.76■□□□□ 0.43
CTNS-203ENST00000399306 SLC17A9Q9BYT1 436 aa17.76■□□□□ 0.43
CTNS-203ENST00000399306 ARRDC1-AS1Q9H2J1 176 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms