RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 CCDC149Q6ZUS6 474 aa5.48□□□□□ -1.53
PTPRD-205ENST00000397611 RORBQ92753 470 aa5.48□□□□□ -1.53
PTPRD-205ENST00000397611 ZNF597Q96LX8 424 aa5.48□□□□□ -1.53
PTPRD-205ENST00000397611 PRICKLE1Q96MT3 831 aaPredicted RBP5.48□□□□□ -1.53
PTPRD-205ENST00000397611 MRPL57Q9BQC6 102 aaKnown RBP5.48□□□□□ -1.53
PTPRD-205ENST00000397611 GPRC5DQ9NZD1 345 aa5.48□□□□□ -1.53
PTPRD-205ENST00000397611 NFKBIEO00221 500 aa5.48□□□□□ -1.53
PTPRD-205ENST00000397611 SLC7A4O43246 635 aa5.48□□□□□ -1.53
PTPRD-205ENST00000397611 EDN1P05305 212 aa5.48□□□□□ -1.53
PTPRD-205ENST00000397611 PFKMP08237 780 aa5.48□□□□□ -1.53
PTPRD-205ENST00000397611 BMP2P12643 396 aa5.48□□□□□ -1.53
PTPRD-205ENST00000397611 IL12AP29459 219 aa5.48□□□□□ -1.53
PTPRD-205ENST00000397611 TUFMP49411 452 aaKnown RBP5.48□□□□□ -1.53
PTPRD-205ENST00000397611 MAPRE1Q15691 268 aaKnown RBP5.48□□□□□ -1.53
PTPRD-205ENST00000397611 SV2CQ496J9 727 aa5.48□□□□□ -1.53
PTPRD-205ENST00000397611 PCID2Q5JVF3 399 aa5.48□□□□□ -1.53
PTPRD-205ENST00000397611 BROXQ5VW32 411 aa5.48□□□□□ -1.53
PTPRD-205ENST00000397611 TAF2Q6P1X5 1199 aa5.48□□□□□ -1.53
PTPRD-205ENST00000397611 PIGZQ86VD9 579 aa5.48□□□□□ -1.53
PTPRD-205ENST00000397611 PPTC7Q8NI37 304 aa5.48□□□□□ -1.53
PTPRD-205ENST00000397611 UBA3Q8TBC4 463 aa5.48□□□□□ -1.53
PTPRD-205ENST00000397611 OSCP1Q8WVF1 389 aa5.48□□□□□ -1.53
PTPRD-205ENST00000397611 RCN3Q96D15 328 aa5.48□□□□□ -1.53
PTPRD-205ENST00000397611 RNF145Q96MT1 663 aa5.48□□□□□ -1.53
PTPRD-205ENST00000397611 RDH12Q96NR8 316 aa5.48□□□□□ -1.53
PTPRD-205ENST00000397611 C9orf16Q9BUW7 83 aa5.48□□□□□ -1.53
PTPRD-205ENST00000397611 LIN28AQ9H9Z2 209 aaKnown RBP5.48□□□□□ -1.53
PTPRD-205ENST00000397611 PMF1-BGLAPU3KQ54 211 aa5.48□□□□□ -1.53
PTPRD-205ENST00000397611 HS6ST1O60243 411 aa5.48□□□□□ -1.53
PTPRD-205ENST00000397611 HUS1O60921 280 aa5.48□□□□□ -1.53
PTPRD-205ENST00000397611 MED26O95402 600 aa5.48□□□□□ -1.53
PTPRD-205ENST00000397611 DPEP1P16444 411 aa5.48□□□□□ -1.53
PTPRD-205ENST00000397611 MAGEA8P43361 318 aa5.48□□□□□ -1.53
PTPRD-205ENST00000397611 GSSP48637 474 aa5.48□□□□□ -1.53
PTPRD-205ENST00000397611 APOFQ13790 326 aa5.48□□□□□ -1.53
PTPRD-205ENST00000397611 INTS11Q5TA45 600 aaKnown RBP5.48□□□□□ -1.53
PTPRD-205ENST00000397611 NCBP2-AS2Q69YL0 99 aa5.48□□□□□ -1.53
PTPRD-205ENST00000397611 DHRS4L2Q6PKH6 230 aa5.48□□□□□ -1.53
PTPRD-205ENST00000397611 SLCO6A1Q86UG4 719 aa5.48□□□□□ -1.53
PTPRD-205ENST00000397611 SLC22A9Q8IVM8 553 aa5.48□□□□□ -1.53
PTPRD-205ENST00000397611 ULK4Q96C45 1275 aa5.48□□□□□ -1.53
PTPRD-205ENST00000397611 EGFL8Q99944 293 aa5.48□□□□□ -1.53
PTPRD-205ENST00000397611 MAGEB5Q9BZ81 275 aa5.48□□□□□ -1.53
PTPRD-205ENST00000397611 RIBC2Q9H4K1 309 aa5.48□□□□□ -1.53
PTPRD-205ENST00000397611 MAN1C1Q9NR34 630 aa5.48□□□□□ -1.53
PTPRD-205ENST00000397611 SAE1Q9UBE0 346 aaPredicted RBP5.48□□□□□ -1.53
PTPRD-205ENST00000397611 PPM1HQ9ULR3 514 aa5.48□□□□□ -1.53
PTPRD-205ENST00000397611 PRELID1Q9Y255 219 aa5.48□□□□□ -1.53
PTPRD-205ENST00000397611 SNX9Q9Y5X1 595 aa5.48□□□□□ -1.53
PTPRD-205ENST00000397611 CXorf49A8MYA2 514 aaPredicted RBP5.48□□□□□ -1.53
PTPRD-205ENST00000397611 TPP1O14773 563 aa5.48□□□□□ -1.53
PTPRD-205ENST00000397611 INPP4BO15327 924 aa5.48□□□□□ -1.53
PTPRD-205ENST00000397611 ERCC2P18074 760 aa5.48□□□□□ -1.53
PTPRD-205ENST00000397611 SLC7A1P30825 629 aa5.48□□□□□ -1.53
PTPRD-205ENST00000397611 CLCN5P51795 746 aa5.48□□□□□ -1.53
PTPRD-205ENST00000397611 FASTKQ14296 549 aaKnown RBP5.48□□□□□ -1.53
PTPRD-205ENST00000397611 PDCD4Q53EL6 469 aaKnown RBP5.48□□□□□ -1.53
PTPRD-205ENST00000397611 EFCAB12Q6NXP0 572 aa5.48□□□□□ -1.53
PTPRD-205ENST00000397611 NEK5Q6P3R8 708 aa5.48□□□□□ -1.53
PTPRD-205ENST00000397611 ABRAXAS1Q6UWZ7 409 aa5.48□□□□□ -1.53
PTPRD-205ENST00000397611 STRA8Q7Z7C7 330 aa5.48□□□□□ -1.53
PTPRD-205ENST00000397611 C11orf74Q86VG3 221 aa5.48□□□□□ -1.53
PTPRD-205ENST00000397611 OR7A2PQ8NGA2 310 aa5.48□□□□□ -1.53
PTPRD-205ENST00000397611 DQX1Q8TE96 717 aaKnown RBP5.48□□□□□ -1.53
PTPRD-205ENST00000397611 LENG8Q96PV6 779 aaPredicted RBP5.48□□□□□ -1.53
PTPRD-205ENST00000397611 DUSP16Q9BY84 665 aa5.48□□□□□ -1.53
PTPRD-205ENST00000397611 PNPOQ9NVS9 261 aa5.48□□□□□ -1.53
PTPRD-205ENST00000397611 HACL1Q9UJ83 578 aa5.48□□□□□ -1.53
PTPRD-205ENST00000397611 DCLK1O15075 740 aa5.48□□□□□ -1.53
PTPRD-205ENST00000397611 SUPT7LO94864 414 aa5.48□□□□□ -1.53
PTPRD-205ENST00000397611 DARSP14868 501 aaKnown RBP5.48□□□□□ -1.53
PTPRD-205ENST00000397611 CYP2B6P20813 491 aa5.48□□□□□ -1.53
PTPRD-205ENST00000397611 WARSP23381 471 aaKnown RBP5.48□□□□□ -1.53
PTPRD-205ENST00000397611 TUBP50607 506 aa5.48□□□□□ -1.53
PTPRD-205ENST00000397611 SULT2A1Q06520 285 aa5.48□□□□□ -1.53
PTPRD-205ENST00000397611 PM20D1Q6GTS8 502 aa5.48□□□□□ -1.53
PTPRD-205ENST00000397611 ZYG11AQ6WRX3 759 aa5.48□□□□□ -1.53
PTPRD-205ENST00000397611 CAMK1DQ8IU85 385 aa5.48□□□□□ -1.53
PTPRD-205ENST00000397611 CENPLQ8N0S6 344 aaPredicted RBP5.48□□□□□ -1.53
PTPRD-205ENST00000397611 COLGALT1Q8NBJ5 622 aa5.48□□□□□ -1.53
PTPRD-205ENST00000397611 FIG4Q92562 907 aa5.48□□□□□ -1.53
PTPRD-205ENST00000397611 SNX27Q96L92 541 aa5.48□□□□□ -1.53
PTPRD-205ENST00000397611 RBM38Q9H0Z9 239 aaKnown RBP5.48□□□□□ -1.53
PTPRD-205ENST00000397611 HPS4Q9NQG7 708 aa5.48□□□□□ -1.53
PTPRD-205ENST00000397611 TMEM216Q9P0N5 145 aa5.48□□□□□ -1.53
PTPRD-205ENST00000397611 MOXD2PA6NHM9 499 aa5.48□□□□□ -1.53
PTPRD-205ENST00000397611 NOTOA8MTQ0 251 aa5.48□□□□□ -1.53
PTPRD-205ENST00000397611 H3BRB1 525 aa5.48□□□□□ -1.53
PTPRD-205ENST00000397611 LDLRP01130 860 aa5.48□□□□□ -1.53
PTPRD-205ENST00000397611 EIF2S1P05198 315 aaKnown RBP5.48□□□□□ -1.53
PTPRD-205ENST00000397611 PSME3P61289 254 aa5.48□□□□□ -1.53
PTPRD-205ENST00000397611 ADGRE1Q14246 886 aa5.48□□□□□ -1.53
PTPRD-205ENST00000397611 IL23RQ5VWK5 629 aa5.48□□□□□ -1.53
PTPRD-205ENST00000397611 STK32CQ86UX6 486 aa5.48□□□□□ -1.53
PTPRD-205ENST00000397611 ZC3HC1Q86WB0 502 aaKnown RBP5.48□□□□□ -1.53
PTPRD-205ENST00000397611 SCAIQ8N9R8 606 aa5.48□□□□□ -1.53
PTPRD-205ENST00000397611 ZFP28Q8NHY6 868 aa5.48□□□□□ -1.53
PTPRD-205ENST00000397611 SPATA33Q96N06 139 aa5.48□□□□□ -1.53
PTPRD-205ENST00000397611 TUT1Q9H6E5 874 aaKnown RBP5.48□□□□□ -1.53
PTPRD-205ENST00000397611 POPDC3Q9HBV1 291 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms