RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.87□□□□□ -1.31
SMCO1-201ENST00000397537 FBLN7Q53RD9 439 aa6.87□□□□□ -1.31
SMCO1-201ENST00000397537 JADE1Q6IE81 842 aa6.87□□□□□ -1.31
SMCO1-201ENST00000397537 PAPD4Q6PIY7 484 aaKnown RBP6.87□□□□□ -1.31
SMCO1-201ENST00000397537 NHLRC1Q6VVB1 395 aa6.87□□□□□ -1.31
SMCO1-201ENST00000397537 TRIM72Q6ZMU5 477 aa6.87□□□□□ -1.31
SMCO1-201ENST00000397537 CCDC65Q8IXS2 484 aa6.87□□□□□ -1.31
SMCO1-201ENST00000397537 ZNF321PQ8N8H1 164 aa6.87□□□□□ -1.31
SMCO1-201ENST00000397537 CADM4Q8NFZ8 388 aa6.87□□□□□ -1.31
SMCO1-201ENST00000397537 GIMAP7Q8NHV1 300 aa6.87□□□□□ -1.31
SMCO1-201ENST00000397537 LRRC8CQ8TDW0 803 aa6.87□□□□□ -1.31
SMCO1-201ENST00000397537 FBLIM1Q8WUP2 373 aa6.87□□□□□ -1.31
SMCO1-201ENST00000397537 ARHGAP45Q92619 1136 aa6.87□□□□□ -1.31
SMCO1-201ENST00000397537 FAM149B1Q96BN6 582 aa6.87□□□□□ -1.31
SMCO1-201ENST00000397537 C5orf30Q96GV9 206 aa6.87□□□□□ -1.31
SMCO1-201ENST00000397537 PIWIL1Q96J94 861 aaKnown RBP6.87□□□□□ -1.31
SMCO1-201ENST00000397537 COX4I2Q96KJ9 171 aa6.87□□□□□ -1.31
SMCO1-201ENST00000397537 C5orf34Q96MH7 638 aa6.87□□□□□ -1.31
SMCO1-201ENST00000397537 ZSCAN5AQ9BUG6 496 aa6.87□□□□□ -1.31
SMCO1-201ENST00000397537 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.87□□□□□ -1.31
SMCO1-201ENST00000397537 CAPS2Q9BXY5 557 aa6.87□□□□□ -1.31
SMCO1-201ENST00000397537 OSBPL8Q9BZF1 889 aa6.87□□□□□ -1.31
SMCO1-201ENST00000397537 GPR88Q9GZN0 384 aa6.87□□□□□ -1.31
SMCO1-201ENST00000397537 DUSP15Q9H1R2 295 aaPredicted RBP6.87□□□□□ -1.31
SMCO1-201ENST00000397537 CCDC134Q9H6E4 229 aa6.87□□□□□ -1.31
SMCO1-201ENST00000397537 TMEM184CQ9NVA4 438 aa6.87□□□□□ -1.31
SMCO1-201ENST00000397537 KCMF1Q9P0J7 381 aa6.87□□□□□ -1.31
SMCO1-201ENST00000397537 TRPC4Q9UBN4 977 aa6.87□□□□□ -1.31
SMCO1-201ENST00000397537 CD207Q9UJ71 328 aa6.87□□□□□ -1.31
SMCO1-201ENST00000397537 FBXW2Q9UKT8 454 aa6.87□□□□□ -1.31
SMCO1-201ENST00000397537 PHF24Q9UPV7 400 aa6.87□□□□□ -1.31
SMCO1-201ENST00000397537 ARHGEF28Q8N1W1 1705 aaKnown RBP6.86□□□□□ -1.31
SMCO1-201ENST00000397537 A6NL46 340 aa6.86□□□□□ -1.31
SMCO1-201ENST00000397537 AQP7P3A6NL99 342 aa6.86□□□□□ -1.31
SMCO1-201ENST00000397537 TBKBP1A7MCY6 615 aa6.86□□□□□ -1.31
SMCO1-201ENST00000397537 WASH4PA8MWX3 477 aa6.86□□□□□ -1.31
SMCO1-201ENST00000397537 CCDC188H7C350 402 aa6.86□□□□□ -1.31
SMCO1-201ENST00000397537 EBAG9O00559 213 aa6.86□□□□□ -1.31
SMCO1-201ENST00000397537 N4BP3O15049 544 aa6.86□□□□□ -1.31
SMCO1-201ENST00000397537 CLIC2O15247 247 aa6.86□□□□□ -1.31
SMCO1-201ENST00000397537 ZNF821O75541 412 aaPredicted RBP6.86□□□□□ -1.31
SMCO1-201ENST00000397537 PRSS23O95084 383 aa6.86□□□□□ -1.31
SMCO1-201ENST00000397537 CHRM3P20309 590 aa6.86□□□□□ -1.31
SMCO1-201ENST00000397537 FUT4P22083 530 aa6.86□□□□□ -1.31
SMCO1-201ENST00000397537 SP100P23497 879 aaPredicted RBP6.86□□□□□ -1.31
SMCO1-201ENST00000397537 PTPN4P29074 926 aa6.86□□□□□ -1.31
SMCO1-201ENST00000397537 MCM5P33992 734 aa6.86□□□□□ -1.31
SMCO1-201ENST00000397537 KIR3DL1P43629 444 aa6.86□□□□□ -1.31
SMCO1-201ENST00000397537 CLCNKBP51801 687 aa6.86□□□□□ -1.31
SMCO1-201ENST00000397537 PNLIPRP2P54317 469 aa6.86□□□□□ -1.31
SMCO1-201ENST00000397537 CARD18P57730 90 aa6.86□□□□□ -1.31
SMCO1-201ENST00000397537 TAP2Q03519 686 aa6.86□□□□□ -1.31
SMCO1-201ENST00000397537 DUOXA2Q1HG44 320 aa6.86□□□□□ -1.31
SMCO1-201ENST00000397537 HERC4Q5GLZ8 1057 aaPredicted RBP6.86□□□□□ -1.31
SMCO1-201ENST00000397537 ZNF667Q5HYK9 610 aa6.86□□□□□ -1.31
SMCO1-201ENST00000397537 CRB2Q5IJ48 1285 aa6.86□□□□□ -1.31
SMCO1-201ENST00000397537 IQCHQ86VS3 1027 aa6.86□□□□□ -1.31
SMCO1-201ENST00000397537 WDR49Q8IV35 697 aa6.86□□□□□ -1.31
SMCO1-201ENST00000397537 PSTKQ8IV42 348 aaKnown RBP6.86□□□□□ -1.31
SMCO1-201ENST00000397537 ABRAQ8N0Z2 381 aa6.86□□□□□ -1.31
SMCO1-201ENST00000397537 REPS2Q8NFH8 660 aa6.86□□□□□ -1.31
SMCO1-201ENST00000397537 OR8K5Q8NH50 307 aa6.86□□□□□ -1.31
SMCO1-201ENST00000397537 MDM1Q8TC05 714 aa6.86□□□□□ -1.31
SMCO1-201ENST00000397537 TEKT4Q8WW24 435 aa6.86□□□□□ -1.31
SMCO1-201ENST00000397537 TMEM186Q96B77 213 aa6.86□□□□□ -1.31
SMCO1-201ENST00000397537 C8orf76Q96K31 380 aa6.86□□□□□ -1.31
SMCO1-201ENST00000397537 HNRNPABQ99729 332 aaKnown RBP6.86□□□□□ -1.31
SMCO1-201ENST00000397537 KIFC3Q9BVG8 833 aa6.86□□□□□ -1.31
SMCO1-201ENST00000397537 FAM83DQ9H4H8 585 aa6.86□□□□□ -1.31
SMCO1-201ENST00000397537 ACSS3Q9H6R3 686 aa6.86□□□□□ -1.31
SMCO1-201ENST00000397537 SYNPO2LQ9H987 977 aa6.86□□□□□ -1.31
SMCO1-201ENST00000397537 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.86□□□□□ -1.31
SMCO1-201ENST00000397537 SPATA7Q9P0W8 599 aa6.86□□□□□ -1.31
SMCO1-201ENST00000397537 CRNNQ9UBG3 495 aaPredicted RBP6.86□□□□□ -1.31
SMCO1-201ENST00000397537 CNOT11Q9UKZ1 510 aaKnown RBP6.86□□□□□ -1.31
SMCO1-201ENST00000397537 NFU1Q9UMS0 254 aa6.86□□□□□ -1.31
SMCO1-201ENST00000397537 ZBTB1Q9Y2K1 713 aa6.86□□□□□ -1.31
SMCO1-201ENST00000397537 PCDHA10Q9Y5I2 948 aa6.86□□□□□ -1.31
SMCO1-201ENST00000397537 ARHGEF10O15013 1369 aa6.86□□□□□ -1.31
SMCO1-201ENST00000397537 SBF2Q86WG5 1849 aa6.86□□□□□ -1.31
SMCO1-201ENST00000397537 HFM1A2PYH4 1435 aa6.86□□□□□ -1.31
SMCO1-201ENST00000397537 SBNO1A3KN83 1393 aa6.85□□□□□ -1.31
SMCO1-201ENST00000397537 A0A1B0GUL7 405 aa6.85□□□□□ -1.31
SMCO1-201ENST00000397537 SLC35F4A4IF30 521 aa6.85□□□□□ -1.31
SMCO1-201ENST00000397537 AGAP5A6NIR3 686 aa6.85□□□□□ -1.31
SMCO1-201ENST00000397537 STMND1H3BQB6 276 aa6.85□□□□□ -1.31
SMCO1-201ENST00000397537 M0QYT0 321 aa6.85□□□□□ -1.31
SMCO1-201ENST00000397537 SNAP23O00161 211 aa6.85□□□□□ -1.31
SMCO1-201ENST00000397537 DYNC1LI2O43237 492 aaPredicted RBP6.85□□□□□ -1.31
SMCO1-201ENST00000397537 GFRA3O60609 400 aa6.85□□□□□ -1.31
SMCO1-201ENST00000397537 CUTAO60888 179 aa6.85□□□□□ -1.31
SMCO1-201ENST00000397537 SMC2O95347 1197 aa6.85□□□□□ -1.31
SMCO1-201ENST00000397537 VNN2O95498 520 aa6.85□□□□□ -1.31
SMCO1-201ENST00000397537 PIM1P11309 404 aaPredicted RBP6.85□□□□□ -1.31
SMCO1-201ENST00000397537 WNT5AP41221 380 aa6.85□□□□□ -1.31
SMCO1-201ENST00000397537 NR2C2P49116 596 aa6.85□□□□□ -1.31
SMCO1-201ENST00000397537 PRRX1P54821 245 aa6.85□□□□□ -1.31
SMCO1-201ENST00000397537 SPAG1Q07617 926 aa6.85□□□□□ -1.31
SMCO1-201ENST00000397537 CSHL1Q14406 222 aa6.85□□□□□ -1.31
SMCO1-201ENST00000397537 RBBP5Q15291 538 aaKnown RBP6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms