RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 POLR2LP62875 67 aaKnown RBP21.34■■□□□ 1.01
TSPAN4-206ENST00000397408 RACK1P63244 317 aaKnown RBP21.34■■□□□ 1.01
TSPAN4-206ENST00000397408 SEMG2Q02383 582 aa21.34■■□□□ 1.01
TSPAN4-206ENST00000397408 WASHC5Q12768 1159 aa21.34■■□□□ 1.01
TSPAN4-206ENST00000397408 KLF1Q13351 362 aaPredicted RBP21.34■■□□□ 1.01
TSPAN4-206ENST00000397408 IHHQ14623 411 aa21.34■■□□□ 1.01
TSPAN4-206ENST00000397408 TEX44Q53QW1 395 aa21.34■■□□□ 1.01
TSPAN4-206ENST00000397408 ARMC12Q5T9G4 340 aa21.34■■□□□ 1.01
TSPAN4-206ENST00000397408 CDKL3Q8IVW4 592 aaPredicted RBP21.34■■□□□ 1.01
TSPAN4-206ENST00000397408 CXorf40AQ8TE69 158 aa21.34■■□□□ 1.01
TSPAN4-206ENST00000397408 HTR3CQ8WXA8 447 aa21.34■■□□□ 1.01
TSPAN4-206ENST00000397408 MYOCQ99972 504 aa21.34■■□□□ 1.01
TSPAN4-206ENST00000397408 WRAP53Q9BUR4 548 aaKnown RBP21.34■■□□□ 1.01
TSPAN4-206ENST00000397408 TLR10Q9BXR5 811 aa21.34■■□□□ 1.01
TSPAN4-206ENST00000397408 CARD9Q9H257 536 aa21.34■■□□□ 1.01
TSPAN4-206ENST00000397408 C10orf88Q9H8K7 445 aa21.34■■□□□ 1.01
TSPAN4-206ENST00000397408 KNL1Q8NG31 2342 aa21.33■■□□□ 1.01
TSPAN4-206ENST00000397408 PCDH15Q96QU1 1955 aa21.33■■□□□ 1.01
TSPAN4-206ENST00000397408 TCRBV7S2A1N4TA0A589 114 aa21.33■■□□□ 1.01
TSPAN4-206ENST00000397408 IGLON5A6NGN9 336 aa21.33■■□□□ 1.01
TSPAN4-206ENST00000397408 RIOK3O14730 519 aaKnown RBP21.33■■□□□ 1.01
TSPAN4-206ENST00000397408 WNT9AO14904 365 aa21.33■■□□□ 1.01
TSPAN4-206ENST00000397408 GDF9O60383 454 aa21.33■■□□□ 1.01
TSPAN4-206ENST00000397408 PGLSO95336 258 aa21.33■■□□□ 1.01
TSPAN4-206ENST00000397408 RBP3P10745 1247 aa21.33■■□□□ 1.01
TSPAN4-206ENST00000397408 ENGP17813 658 aa21.33■■□□□ 1.01
TSPAN4-206ENST00000397408 CD86P42081 329 aa21.33■■□□□ 1.01
TSPAN4-206ENST00000397408 GRIA4P48058 902 aa21.33■■□□□ 1.01
TSPAN4-206ENST00000397408 FGL2Q14314 439 aa21.33■■□□□ 1.01
TSPAN4-206ENST00000397408 TEAD4Q15561 434 aa21.33■■□□□ 1.01
TSPAN4-206ENST00000397408 ADAT2Q7Z6V5 191 aaKnown RBP21.33■■□□□ 1.01
TSPAN4-206ENST00000397408 ZSCAN30Q86W11 494 aa21.33■■□□□ 1.01
TSPAN4-206ENST00000397408 TTC13Q8NBP0 860 aa21.33■■□□□ 1.01
TSPAN4-206ENST00000397408 SPOCK2Q92563 424 aa21.33■■□□□ 1.01
TSPAN4-206ENST00000397408 TDRD1Q9BXT4 1180 aaKnown RBP21.33■■□□□ 1.01
TSPAN4-206ENST00000397408 FZD3Q9NPG1 666 aa21.33■■□□□ 1.01
TSPAN4-206ENST00000397408 KLHL8Q9P2G9 620 aaPredicted RBP21.33■■□□□ 1.01
TSPAN4-206ENST00000397408 PYCARDQ9ULZ3 195 aa21.33■■□□□ 1.01
TSPAN4-206ENST00000397408 A0A1B0GVT2 93 aa21.32■■□□□ 1
TSPAN4-206ENST00000397408 MMP20O60882 483 aa21.32■■□□□ 1
TSPAN4-206ENST00000397408 MMP2P08253 660 aa21.32■■□□□ 1
TSPAN4-206ENST00000397408 CA4P22748 312 aa21.32■■□□□ 1
TSPAN4-206ENST00000397408 RBL1P28749 1068 aa21.32■■□□□ 1
TSPAN4-206ENST00000397408 FAM193AP78312 1265 aa21.32■■□□□ 1
TSPAN4-206ENST00000397408 GRIK2Q13002 908 aa21.32■■□□□ 1
TSPAN4-206ENST00000397408 TMEM52BQ4KMG9 183 aa21.32■■□□□ 1
TSPAN4-206ENST00000397408 TEKT5Q96M29 485 aa21.32■■□□□ 1
TSPAN4-206ENST00000397408 GTPBP2Q9BX10 602 aaKnown RBP21.32■■□□□ 1
TSPAN4-206ENST00000397408 SLC17A9Q9BYT1 436 aa21.32■■□□□ 1
TSPAN4-206ENST00000397408 GLOD4Q9HC38 313 aa21.32■■□□□ 1
TSPAN4-206ENST00000397408 CA5BQ9Y2D0 317 aa21.32■■□□□ 1
TSPAN4-206ENST00000397408 R3HDM2Q9Y2K5 976 aaKnown RBP21.32■■□□□ 1
TSPAN4-206ENST00000397408 ADAMTS9Q9P2N4 1935 aa21.32■■□□□ 1
TSPAN4-206ENST00000397408 DMXL1Q9Y485 3027 aa21.31■■□□□ 1
TSPAN4-206ENST00000397408 LOC105378220A0A1B0GUY1 285 aaPredicted RBP21.31■■□□□ 1
TSPAN4-206ENST00000397408 PRAMEF26H0Y7S4 382 aa21.31■■□□□ 1
TSPAN4-206ENST00000397408 PDHA1P08559 390 aa21.31■■□□□ 1
TSPAN4-206ENST00000397408 HNRNPA2B1P22626 353 aaKnown RBP21.31■■□□□ 1
TSPAN4-206ENST00000397408 SKOR1P84550 965 aa21.31■■□□□ 1
TSPAN4-206ENST00000397408 SGCGQ13326 291 aa21.31■■□□□ 1
TSPAN4-206ENST00000397408 IMP4Q96G21 291 aaKnown RBP21.31■■□□□ 1
TSPAN4-206ENST00000397408 RBM15Q96T37 977 aaKnown RBP eCLIP21.31■■□□□ 1
TSPAN4-206ENST00000397408 VAT1Q99536 393 aa21.31■■□□□ 1
TSPAN4-206ENST00000397408 FERMT1Q9BQL6 677 aa21.31■■□□□ 1
TSPAN4-206ENST00000397408 C1QTNF2Q9BXJ5 285 aa21.31■■□□□ 1
TSPAN4-206ENST00000397408 SLC25A51Q9H1U9 297 aa21.31■■□□□ 1
TSPAN4-206ENST00000397408 B4GALT6Q9UBX8 382 aa21.31■■□□□ 1
TSPAN4-206ENST00000397408 PHTF1Q9UMS5 762 aa21.31■■□□□ 1
TSPAN4-206ENST00000397408 CHKBQ9Y259 395 aa21.31■■□□□ 1
TSPAN4-206ENST00000397408 USP27XA6NNY8 438 aa21.3■■□□□ 1
TSPAN4-206ENST00000397408 ARHGAP33O14559 1287 aa21.3■■□□□ 1
TSPAN4-206ENST00000397408 FZD6O60353 706 aa21.3■■□□□ 1
TSPAN4-206ENST00000397408 PAK4O96013 591 aaPredicted RBP21.3■■□□□ 1
TSPAN4-206ENST00000397408 WNT1P04628 370 aa21.3■■□□□ 1
TSPAN4-206ENST00000397408 SYPP08247 313 aa21.3■■□□□ 1
TSPAN4-206ENST00000397408 CD38P28907 300 aa21.3■■□□□ 1
TSPAN4-206ENST00000397408 AKT2P31751 481 aa21.3■■□□□ 1
TSPAN4-206ENST00000397408 BNC1Q01954 994 aa21.3■■□□□ 1
TSPAN4-206ENST00000397408 RALGDSQ12967 914 aa21.3■■□□□ 1
TSPAN4-206ENST00000397408 ZNF569Q5MCW4 686 aa21.3■■□□□ 1
TSPAN4-206ENST00000397408 DARS2Q6PI48 645 aaKnown RBP21.3■■□□□ 1
TSPAN4-206ENST00000397408 DPPA4Q7L190 304 aa21.3■■□□□ 1
TSPAN4-206ENST00000397408 SLC13A5Q86YT5 568 aaPredicted RBP21.3■■□□□ 1
TSPAN4-206ENST00000397408 ZNF567Q8N184 647 aa21.3■■□□□ 1
TSPAN4-206ENST00000397408 TMEM145Q8NBT3 493 aa21.3■■□□□ 1
TSPAN4-206ENST00000397408 PIH1D2Q8WWB5 315 aa21.3■■□□□ 1
TSPAN4-206ENST00000397408 A0A1W2PR77 199 aa21.29■■□□□ 1
TSPAN4-206ENST00000397408 ENC1O14682 589 aa21.29■■□□□ 1
TSPAN4-206ENST00000397408 VILLO15195 856 aa21.29■■□□□ 1
TSPAN4-206ENST00000397408 KCNN4O15554 427 aa21.29■■□□□ 1
TSPAN4-206ENST00000397408 KIF5CO60282 957 aa21.29■■□□□ 1
TSPAN4-206ENST00000397408 TM7SF2O76062 418 aa21.29■■□□□ 1
TSPAN4-206ENST00000397408 C6P13671 934 aa21.29■■□□□ 1
TSPAN4-206ENST00000397408 NFKB1P19838 968 aa21.29■■□□□ 1
TSPAN4-206ENST00000397408 NFKBIAP25963 317 aa21.29■■□□□ 1
TSPAN4-206ENST00000397408 CD68P34810 354 aaPredicted RBP21.29■■□□□ 1
TSPAN4-206ENST00000397408 LIG3P49916 1009 aa21.29■■□□□ 1
TSPAN4-206ENST00000397408 ATXN3P54252 364 aaPredicted RBP21.29■■□□□ 1
TSPAN4-206ENST00000397408 EPHB1P54762 984 aa21.29■■□□□ 1
TSPAN4-206ENST00000397408 C21orf59P57076 290 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms