RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 GRIA4P48058 902 aa20.54■□□□□ 0.88
VCPKMT-202ENST00000395860 GALK1P51570 392 aa20.54■□□□□ 0.88
VCPKMT-202ENST00000395860 LAMB3Q13751 1172 aa20.54■□□□□ 0.88
VCPKMT-202ENST00000395860 ZNF234Q14588 700 aa20.54■□□□□ 0.88
VCPKMT-202ENST00000395860 QPCTQ16769 361 aa20.54■□□□□ 0.88
VCPKMT-202ENST00000395860 PTCRAQ6ISU1 281 aaPredicted RBP20.54■□□□□ 0.88
VCPKMT-202ENST00000395860 CTAGE3PQ8IX95 158 aa20.54■□□□□ 0.88
VCPKMT-202ENST00000395860 UNC5BQ8IZJ1 945 aa20.54■□□□□ 0.88
VCPKMT-202ENST00000395860 ZNF366Q8N895 744 aa20.54■□□□□ 0.88
VCPKMT-202ENST00000395860 BRSK1Q8TDC3 778 aa20.54■□□□□ 0.88
VCPKMT-202ENST00000395860 PTPRN2Q92932 1015 aa20.54■□□□□ 0.88
VCPKMT-202ENST00000395860 ARL8AQ96BM9 186 aa20.54■□□□□ 0.88
VCPKMT-202ENST00000395860 CERS2Q96G23 380 aa20.54■□□□□ 0.88
VCPKMT-202ENST00000395860 P2RY13Q9BPV8 354 aa20.54■□□□□ 0.88
VCPKMT-202ENST00000395860 HEPHQ9BQS7 1158 aa20.54■□□□□ 0.88
VCPKMT-202ENST00000395860 MTG2Q9H4K7 406 aa20.54■□□□□ 0.88
VCPKMT-202ENST00000395860 TRPV5Q9NQA5 729 aa20.54■□□□□ 0.88
VCPKMT-202ENST00000395860 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.54■□□□□ 0.88
VCPKMT-202ENST00000395860 VPS18Q9P253 973 aa20.54■□□□□ 0.88
VCPKMT-202ENST00000395860 SLC24A2Q9UI40 661 aa20.54■□□□□ 0.88
VCPKMT-202ENST00000395860 RGS16O15492 202 aaPredicted RBP20.54■□□□□ 0.88
VCPKMT-202ENST00000395860 CDH16O75309 829 aa20.54■□□□□ 0.88
VCPKMT-202ENST00000395860 SLC8A1P32418 973 aa20.54■□□□□ 0.88
VCPKMT-202ENST00000395860 RPL26P61254 145 aaKnown RBP20.54■□□□□ 0.88
VCPKMT-202ENST00000395860 SKIDA1Q1XH10 827 aa20.54■□□□□ 0.88
VCPKMT-202ENST00000395860 NLRP9Q7RTR0 991 aa20.54■□□□□ 0.88
VCPKMT-202ENST00000395860 SUGP1Q8IWZ8 645 aaKnown RBP20.54■□□□□ 0.88
VCPKMT-202ENST00000395860 PIH1D2Q8WWB5 315 aa20.54■□□□□ 0.88
VCPKMT-202ENST00000395860 CDKL2Q92772 493 aa20.54■□□□□ 0.88
VCPKMT-202ENST00000395860 PAFAH2Q99487 392 aa20.54■□□□□ 0.88
VCPKMT-202ENST00000395860 SUV39H2Q9H5I1 410 aa20.54■□□□□ 0.88
VCPKMT-202ENST00000395860 RPL26L1Q9UNX3 145 aaKnown RBP20.54■□□□□ 0.88
VCPKMT-202ENST00000395860 IKBKGQ9Y6K9 419 aa20.54■□□□□ 0.88
VCPKMT-202ENST00000395860 FAM159BA6NKW6 160 aa20.53■□□□□ 0.88
VCPKMT-202ENST00000395860 SPECC1L-ADORA2AF8WAN1 911 aa20.53■□□□□ 0.88
VCPKMT-202ENST00000395860 C1QAP02745 245 aa20.53■□□□□ 0.88
VCPKMT-202ENST00000395860 UGT2B4P06133 528 aa20.53■□□□□ 0.88
VCPKMT-202ENST00000395860 ASGR2P07307 311 aa20.53■□□□□ 0.88
VCPKMT-202ENST00000395860 PAMP19021 973 aa20.53■□□□□ 0.88
VCPKMT-202ENST00000395860 GCAP28676 217 aa20.53■□□□□ 0.88
VCPKMT-202ENST00000395860 CTHP32929 405 aa20.53■□□□□ 0.88
VCPKMT-202ENST00000395860 MSH2P43246 934 aa20.53■□□□□ 0.88
VCPKMT-202ENST00000395860 FRG1Q14331 258 aaKnown RBP20.53■□□□□ 0.88
VCPKMT-202ENST00000395860 TSTD2Q5T7W7 516 aa20.53■□□□□ 0.88
VCPKMT-202ENST00000395860 ESRP1Q6NXG1 681 aaKnown RBP20.53■□□□□ 0.88
VCPKMT-202ENST00000395860 SERPINA13PQ6UXR4 307 aa20.53■□□□□ 0.88
VCPKMT-202ENST00000395860 RIBC1Q8N443 379 aaPredicted RBP20.53■□□□□ 0.88
VCPKMT-202ENST00000395860 PPM1NQ8N819 430 aa20.53■□□□□ 0.88
VCPKMT-202ENST00000395860 GRIN3AQ8TCU5 1115 aa20.53■□□□□ 0.88
VCPKMT-202ENST00000395860 DNASE1L2Q92874 299 aa20.53■□□□□ 0.88
VCPKMT-202ENST00000395860 ZNF641Q96N77 438 aaPredicted RBP20.53■□□□□ 0.88
VCPKMT-202ENST00000395860 FBRSL1Q9HCM7 1045 aaKnown RBP20.53■□□□□ 0.88
VCPKMT-202ENST00000395860 SMYD2Q9NRG4 433 aa20.53■□□□□ 0.88
VCPKMT-202ENST00000395860 IL1RAPL1Q9NZN1 696 aa20.53■□□□□ 0.88
VCPKMT-202ENST00000395860 CTNNAL1Q9UBT7 734 aa20.53■□□□□ 0.88
VCPKMT-202ENST00000395860 SLC2A6Q9UGQ3 507 aa20.53■□□□□ 0.88
VCPKMT-202ENST00000395860 FAM50BQ9Y247 325 aa20.53■□□□□ 0.88
VCPKMT-202ENST00000395860 TCF20Q9UGU0 1960 aaKnown RBP20.52■□□□□ 0.88
VCPKMT-202ENST00000395860 MROH6A6NGR9 719 aa20.52■□□□□ 0.88
VCPKMT-202ENST00000395860 LDB2O43679 373 aa20.52■□□□□ 0.88
VCPKMT-202ENST00000395860 CRTAMO95727 393 aa20.52■□□□□ 0.88
VCPKMT-202ENST00000395860 ERVK-10P10266 1014 aa20.52■□□□□ 0.88
VCPKMT-202ENST00000395860 MGAT5Q09328 741 aa20.52■□□□□ 0.88
VCPKMT-202ENST00000395860 SMAD1Q15797 465 aaKnown RBP20.52■□□□□ 0.88
VCPKMT-202ENST00000395860 TTMPQ5BVD1 217 aa20.52■□□□□ 0.88
VCPKMT-202ENST00000395860 GDPD4Q6W3E5 623 aa20.52■□□□□ 0.88
VCPKMT-202ENST00000395860 GLT6D1Q7Z4J2 308 aa20.52■□□□□ 0.88
VCPKMT-202ENST00000395860 RASSF3Q86WH2 238 aa20.52■□□□□ 0.88
VCPKMT-202ENST00000395860 LRRC6Q86X45 466 aa20.52■□□□□ 0.88
VCPKMT-202ENST00000395860 TDRPQ86YL5 185 aa20.52■□□□□ 0.88
VCPKMT-202ENST00000395860 VOPP1Q96AW1 172 aa20.52■□□□□ 0.88
VCPKMT-202ENST00000395860 PGM2Q96G03 612 aa20.52■□□□□ 0.88
VCPKMT-202ENST00000395860 SMIM14Q96QK8 99 aa20.52■□□□□ 0.88
VCPKMT-202ENST00000395860 TREX1Q9NSU2 369 aa20.52■□□□□ 0.88
VCPKMT-202ENST00000395860 C20orf96Q9NUD7 363 aaPredicted RBP20.52■□□□□ 0.88
VCPKMT-202ENST00000395860 PSMC3IPQ9P2W1 217 aaPredicted RBP20.52■□□□□ 0.88
VCPKMT-202ENST00000395860 THAP10Q9P2Z0 257 aaPredicted RBP20.52■□□□□ 0.88
VCPKMT-202ENST00000395860 IL36AQ9UHA7 158 aa20.52■□□□□ 0.88
VCPKMT-202ENST00000395860 TBK1Q9UHD2 729 aa20.52■□□□□ 0.88
VCPKMT-202ENST00000395860 SPO11Q9Y5K1 396 aa20.52■□□□□ 0.88
VCPKMT-202ENST00000395860 ARL5AQ9Y689 179 aa20.52■□□□□ 0.88
VCPKMT-202ENST00000395860 MYO10Q9HD67 2058 aa20.52■□□□□ 0.88
VCPKMT-202ENST00000395860 EDDM13A0A1B0GTR0 161 aa20.51■□□□□ 0.87
VCPKMT-202ENST00000395860 CXorf49A8MYA2 514 aaPredicted RBP20.51■□□□□ 0.87
VCPKMT-202ENST00000395860 PAPSS2O95340 614 aaPredicted RBP20.51■□□□□ 0.87
VCPKMT-202ENST00000395860 HLA-EP13747 358 aa20.51■□□□□ 0.87
VCPKMT-202ENST00000395860 CTPS1P17812 591 aa20.51■□□□□ 0.87
VCPKMT-202ENST00000395860 OAS2P29728 719 aaKnown RBP20.51■□□□□ 0.87
VCPKMT-202ENST00000395860 ABL2P42684 1182 aa20.51■□□□□ 0.87
VCPKMT-202ENST00000395860 CNGA3Q16281 694 aa20.51■□□□□ 0.87
VCPKMT-202ENST00000395860 HNRNPA1L2Q32P51 320 aaKnown RBP20.51■□□□□ 0.87
VCPKMT-202ENST00000395860 PUS10Q3MIT2 529 aaKnown RBP20.51■□□□□ 0.87
VCPKMT-202ENST00000395860 AGBL2Q5U5Z8 902 aa20.51■□□□□ 0.87
VCPKMT-202ENST00000395860 KCTD16Q68DU8 428 aa20.51■□□□□ 0.87
VCPKMT-202ENST00000395860 ZNF449Q6P9G9 518 aa20.51■□□□□ 0.87
VCPKMT-202ENST00000395860 KCNMB4Q86W47 210 aa20.51■□□□□ 0.87
VCPKMT-202ENST00000395860 ATP6V1G3Q96LB4 118 aa20.51■□□□□ 0.87
VCPKMT-202ENST00000395860 HACD3Q9P035 362 aa20.51■□□□□ 0.87
VCPKMT-202ENST00000395860 WASF2Q9Y6W5 498 aa20.51■□□□□ 0.87
VCPKMT-202ENST00000395860 PIAS3Q9Y6X2 628 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms