RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 LRRC73Q5JTD7 316 aa17.64■□□□□ 0.41
SNRPA1-202ENST00000394082 ERAP2Q6P179 960 aa17.64■□□□□ 0.41
SNRPA1-202ENST00000394082 SCYL2Q6P3W7 929 aa17.64■□□□□ 0.41
SNRPA1-202ENST00000394082 ZNF605Q86T29 641 aa17.64■□□□□ 0.41
SNRPA1-202ENST00000394082 MCEEQ96PE7 176 aa17.64■□□□□ 0.41
SNRPA1-202ENST00000394082 AGPAT1Q99943 283 aa17.64■□□□□ 0.41
SNRPA1-202ENST00000394082 NCAPGQ9BPX3 1015 aa17.64■□□□□ 0.41
SNRPA1-202ENST00000394082 WRAP53Q9BUR4 548 aaKnown RBP17.64■□□□□ 0.41
SNRPA1-202ENST00000394082 CPNE5Q9HCH3 593 aa17.64■□□□□ 0.41
SNRPA1-202ENST00000394082 PCDH12Q9NPG4 1184 aa17.64■□□□□ 0.41
SNRPA1-202ENST00000394082 DGKBQ9Y6T7 804 aa17.64■□□□□ 0.41
SNRPA1-202ENST00000394082 ZNF462Q96JM2 2506 aa17.63■□□□□ 0.41
SNRPA1-202ENST00000394082 K7ENP7 123 aa17.63■□□□□ 0.41
SNRPA1-202ENST00000394082 INSIG1O15503 277 aa17.63■□□□□ 0.41
SNRPA1-202ENST00000394082 PRAMEF11O60813 436 aa17.63■□□□□ 0.41
SNRPA1-202ENST00000394082 HOXC4P09017 264 aaPredicted RBP17.63■□□□□ 0.41
SNRPA1-202ENST00000394082 CTSEP14091 401 aa17.63■□□□□ 0.41
SNRPA1-202ENST00000394082 ITIH2P19823 946 aa17.63■□□□□ 0.41
SNRPA1-202ENST00000394082 MMP12P39900 470 aa17.63■□□□□ 0.41
SNRPA1-202ENST00000394082 RPL7AP62424 266 aaKnown RBP17.63■□□□□ 0.41
SNRPA1-202ENST00000394082 MTM1Q13496 603 aa17.63■□□□□ 0.41
SNRPA1-202ENST00000394082 ALG11Q2TAA5 492 aa17.63■□□□□ 0.41
SNRPA1-202ENST00000394082 ARHGAP40Q5TG30 622 aa17.63■□□□□ 0.41
SNRPA1-202ENST00000394082 INO80CQ6PI98 192 aaPredicted RBP17.63■□□□□ 0.41
SNRPA1-202ENST00000394082 GKN2Q86XP6 184 aa17.63■□□□□ 0.41
SNRPA1-202ENST00000394082 SPOCK2Q92563 424 aa17.63■□□□□ 0.41
SNRPA1-202ENST00000394082 RBM15Q96T37 977 aaKnown RBP eCLIP17.63■□□□□ 0.41
SNRPA1-202ENST00000394082 APOOQ9BUR5 198 aa17.63■□□□□ 0.41
SNRPA1-202ENST00000394082 ACSL6Q9UKU0 697 aa17.63■□□□□ 0.41
SNRPA1-202ENST00000394082 DOLKQ9UPQ8 538 aa17.63■□□□□ 0.41
SNRPA1-202ENST00000394082 PCDHGA7Q9Y5G6 932 aa17.63■□□□□ 0.41
SNRPA1-202ENST00000394082 PIGNO95427 931 aa17.62■□□□□ 0.41
SNRPA1-202ENST00000394082 PLA2G2AP14555 144 aa17.62■□□□□ 0.41
SNRPA1-202ENST00000394082 TPI1P60174 286 aa17.62■□□□□ 0.41
SNRPA1-202ENST00000394082 SRP54P61011 504 aaKnown RBP17.62■□□□□ 0.41
SNRPA1-202ENST00000394082 NSUN2Q08J23 767 aaKnown RBP eCLIP17.62■□□□□ 0.41
SNRPA1-202ENST00000394082 INPP5AQ14642 412 aa17.62■□□□□ 0.41
SNRPA1-202ENST00000394082 RFTN1Q14699 578 aaPredicted RBP17.62■□□□□ 0.41
SNRPA1-202ENST00000394082 TAF1BQ53T94 588 aaPredicted RBP17.62■□□□□ 0.41
SNRPA1-202ENST00000394082 ACAD10Q6JQN1 1059 aa17.62■□□□□ 0.41
SNRPA1-202ENST00000394082 DCUN1D2Q6PH85 259 aa17.62■□□□□ 0.41
SNRPA1-202ENST00000394082 MCOLN2Q8IZK6 566 aa17.62■□□□□ 0.41
SNRPA1-202ENST00000394082 TTC9Q92623 222 aa17.62■□□□□ 0.41
SNRPA1-202ENST00000394082 ECHDC3Q96DC8 303 aa17.62■□□□□ 0.41
SNRPA1-202ENST00000394082 ATP13A3Q9H7F0 1226 aa17.62■□□□□ 0.41
SNRPA1-202ENST00000394082 LMBRD1Q9NUN5 540 aa17.62■□□□□ 0.41
SNRPA1-202ENST00000394082 MYO6Q9UM54 1294 aa17.62■□□□□ 0.41
SNRPA1-202ENST00000394082 ATP8A1Q9Y2Q0 1164 aa17.62■□□□□ 0.41
SNRPA1-202ENST00000394082 LRRK1Q38SD2 2015 aa17.62■□□□□ 0.41
SNRPA1-202ENST00000394082 COL6A6A6NMZ7 2263 aa17.61■□□□□ 0.41
SNRPA1-202ENST00000394082 SETXQ7Z333 2677 aaKnown RBP17.61■□□□□ 0.41
SNRPA1-202ENST00000394082 LRP4O75096 1905 aa17.61■□□□□ 0.41
SNRPA1-202ENST00000394082 ARHGAP42A6NI28 874 aa17.61■□□□□ 0.41
SNRPA1-202ENST00000394082 BUB1BO60566 1050 aaPredicted RBP17.61■□□□□ 0.41
SNRPA1-202ENST00000394082 TNFSF15O95150 251 aa17.61■□□□□ 0.41
SNRPA1-202ENST00000394082 PNLIPP16233 465 aa17.61■□□□□ 0.41
SNRPA1-202ENST00000394082 FERP16591 822 aa17.61■□□□□ 0.41
SNRPA1-202ENST00000394082 SERPINA4P29622 427 aa17.61■□□□□ 0.41
SNRPA1-202ENST00000394082 CCKBRP32239 447 aa17.61■□□□□ 0.41
SNRPA1-202ENST00000394082 LIG3P49916 1009 aa17.61■□□□□ 0.41
SNRPA1-202ENST00000394082 ZNF135P52742 658 aaPredicted RBP17.61■□□□□ 0.41
SNRPA1-202ENST00000394082 POLR2LP62875 67 aaKnown RBP17.61■□□□□ 0.41
SNRPA1-202ENST00000394082 MYL5Q02045 173 aa17.61■□□□□ 0.41
SNRPA1-202ENST00000394082 UBXN1Q04323 297 aa17.61■□□□□ 0.41
SNRPA1-202ENST00000394082 CFAP58Q5T655 872 aa17.61■□□□□ 0.41
SNRPA1-202ENST00000394082 AFMIDQ63HM1 303 aa17.61■□□□□ 0.41
SNRPA1-202ENST00000394082 CRTC1Q6UUV9 634 aa17.61■□□□□ 0.41
SNRPA1-202ENST00000394082 ENPP7Q6UWV6 458 aa17.61■□□□□ 0.41
SNRPA1-202ENST00000394082 HID1Q8IV36 788 aa17.61■□□□□ 0.41
SNRPA1-202ENST00000394082 PSTKQ8IV42 348 aaKnown RBP17.61■□□□□ 0.41
SNRPA1-202ENST00000394082 PCDH19Q8TAB3 1148 aa17.61■□□□□ 0.41
SNRPA1-202ENST00000394082 TSACCQ96A04 125 aaPredicted RBP17.61■□□□□ 0.41
SNRPA1-202ENST00000394082 EXOC2Q96KP1 924 aa17.61■□□□□ 0.41
SNRPA1-202ENST00000394082 PCMTD1Q96MG8 357 aaPredicted RBP17.61■□□□□ 0.41
SNRPA1-202ENST00000394082 WDR92Q96MX6 357 aa17.61■□□□□ 0.41
SNRPA1-202ENST00000394082 SEPT11Q9NVA2 429 aaKnown RBP17.61■□□□□ 0.41
SNRPA1-202ENST00000394082 APPL1Q9UKG1 709 aa17.61■□□□□ 0.41
SNRPA1-202ENST00000394082 D6RAR5 112 aa17.6■□□□□ 0.41
SNRPA1-202ENST00000394082 J3KR12 359 aa17.6■□□□□ 0.41
SNRPA1-202ENST00000394082 TNFRSF10CO14798 259 aa17.6■□□□□ 0.41
SNRPA1-202ENST00000394082 PLD2O14939 933 aa17.6■□□□□ 0.41
SNRPA1-202ENST00000394082 TNFP01375 233 aa17.6■□□□□ 0.41
SNRPA1-202ENST00000394082 CELA2BP08218 269 aaPredicted RBP17.6■□□□□ 0.41
SNRPA1-202ENST00000394082 KELP23276 732 aa17.6■□□□□ 0.41
SNRPA1-202ENST00000394082 TRIM23P36406 574 aa17.6■□□□□ 0.41
SNRPA1-202ENST00000394082 KIAA1024LP59773 190 aa17.6■□□□□ 0.41
SNRPA1-202ENST00000394082 OGFOD3Q6PK18 319 aa17.6■□□□□ 0.41
SNRPA1-202ENST00000394082 APTXQ7Z2E3 356 aaKnown RBP17.6■□□□□ 0.41
SNRPA1-202ENST00000394082 KYQ8NBH2 561 aa17.6■□□□□ 0.41
SNRPA1-202ENST00000394082 NETO2Q8NC67 525 aa17.6■□□□□ 0.41
SNRPA1-202ENST00000394082 GPR156Q8NFN8 814 aa17.6■□□□□ 0.41
SNRPA1-202ENST00000394082 FNIP1Q8TF40 1166 aa17.6■□□□□ 0.41
SNRPA1-202ENST00000394082 TMEM159Q96B96 161 aa17.6■□□□□ 0.41
SNRPA1-202ENST00000394082 TMEM74Q96NL1 305 aa17.6■□□□□ 0.41
SNRPA1-202ENST00000394082 GFM1Q96RP9 751 aaKnown RBP17.6■□□□□ 0.41
SNRPA1-202ENST00000394082 SYT11Q9BT88 431 aa17.6■□□□□ 0.41
SNRPA1-202ENST00000394082 STRADBQ9C0K7 418 aa17.6■□□□□ 0.41
SNRPA1-202ENST00000394082 PARVAQ9NVD7 372 aa17.6■□□□□ 0.41
SNRPA1-202ENST00000394082 ANO10Q9NW15 660 aa17.6■□□□□ 0.41
SNRPA1-202ENST00000394082 GULP1Q9UBP9 304 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms