RNA–Protein interactions for RNA: ENST00000393952.3

LRFN4-202, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

TSL 5 BASIC

Gene LRFN4, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-202ENST00000393952 RPL26P61254 145 aaKnown RBP24.42■■□□□ 1.5
LRFN4-202ENST00000393952 SEPT6Q14141 434 aa24.42■■□□□ 1.5
LRFN4-202ENST00000393952 ELAVL3Q14576 367 aaKnown RBP24.42■■□□□ 1.5
LRFN4-202ENST00000393952 PTPRRQ15256 657 aa24.42■■□□□ 1.5
LRFN4-202ENST00000393952 IL17RCQ8NAC3 791 aa24.42■■□□□ 1.5
LRFN4-202ENST00000393952 BLOC1S5Q8TDH9 187 aa24.42■■□□□ 1.5
LRFN4-202ENST00000393952 KCNV2Q8TDN2 545 aa24.42■■□□□ 1.5
LRFN4-202ENST00000393952 ASB2Q96Q27 587 aa24.42■■□□□ 1.5
LRFN4-202ENST00000393952 OSBPL1AQ9BXW6 950 aa24.42■■□□□ 1.5
LRFN4-202ENST00000393952 VPS37BQ9H9H4 285 aa24.42■■□□□ 1.5
LRFN4-202ENST00000393952 CHRAC1Q9NRG0 131 aa24.42■■□□□ 1.5
LRFN4-202ENST00000393952 SOX13Q9UN79 622 aa24.42■■□□□ 1.5
LRFN4-202ENST00000393952 RPL26L1Q9UNX3 145 aaKnown RBP24.42■■□□□ 1.5
LRFN4-202ENST00000393952 SPO11Q9Y5K1 396 aa24.42■■□□□ 1.5
LRFN4-202ENST00000393952 KLF8O95600 359 aaPredicted RBP24.42■■□□□ 1.5
LRFN4-202ENST00000393952 CTPS1P17812 591 aa24.42■■□□□ 1.5
LRFN4-202ENST00000393952 PGAM1P18669 254 aa24.42■■□□□ 1.5
LRFN4-202ENST00000393952 GRIA4P48058 902 aa24.42■■□□□ 1.5
LRFN4-202ENST00000393952 CCINQ13939 588 aa24.42■■□□□ 1.5
LRFN4-202ENST00000393952 PCID2Q5JVF3 399 aa24.42■■□□□ 1.5
LRFN4-202ENST00000393952 SPDYCQ5MJ68 293 aa24.42■■□□□ 1.5
LRFN4-202ENST00000393952 CFAP58Q5T655 872 aa24.42■■□□□ 1.5
LRFN4-202ENST00000393952 CES3Q6UWW8 571 aa24.42■■□□□ 1.5
LRFN4-202ENST00000393952 ZNF852Q6ZMS4 543 aa24.42■■□□□ 1.5
LRFN4-202ENST00000393952 UNC5AQ6ZN44 842 aa24.42■■□□□ 1.5
LRFN4-202ENST00000393952 HDXQ7Z353 690 aa24.42■■□□□ 1.5
LRFN4-202ENST00000393952 PPHLN1Q8NEY8 458 aaKnown RBP24.42■■□□□ 1.5
LRFN4-202ENST00000393952 LRIG1Q96JA1 1093 aa24.42■■□□□ 1.5
LRFN4-202ENST00000393952 FUT8Q9BYC5 575 aa24.42■■□□□ 1.5
LRFN4-202ENST00000393952 TCAF1Q9Y4C2 921 aa24.42■■□□□ 1.5
LRFN4-202ENST00000393952 CCDC78A2IDD5 438 aa24.41■■□□□ 1.5
LRFN4-202ENST00000393952 RNF40O75150 1001 aa24.41■■□□□ 1.5
LRFN4-202ENST00000393952 PRNPP04156 253 aa24.41■■□□□ 1.5
LRFN4-202ENST00000393952 ADRA1DP25100 572 aa24.41■■□□□ 1.5
LRFN4-202ENST00000393952 MRPS21P82921 87 aaKnown RBP24.41■■□□□ 1.5
LRFN4-202ENST00000393952 PRKCQQ04759 706 aa24.41■■□□□ 1.5
LRFN4-202ENST00000393952 SLC29A2Q14542 456 aa24.41■■□□□ 1.5
LRFN4-202ENST00000393952 POM121L1PQ3SYA9 428 aa24.41■■□□□ 1.5
LRFN4-202ENST00000393952 NAT9Q9BTE0 207 aa24.41■■□□□ 1.5
LRFN4-202ENST00000393952 KIFC1Q9BW19 673 aa24.41■■□□□ 1.5
LRFN4-202ENST00000393952 WNT16Q9UBV4 365 aa24.41■■□□□ 1.5
LRFN4-202ENST00000393952 FBXL21Q9UKT6 434 aa24.41■■□□□ 1.5
LRFN4-202ENST00000393952 SARDHQ9UL12 918 aa24.41■■□□□ 1.5
LRFN4-202ENST00000393952 KRBA1A5PL33 1030 aa24.4■■□□□ 1.5
LRFN4-202ENST00000393952 ADAM23O75077 832 aa24.4■■□□□ 1.5
LRFN4-202ENST00000393952 ALPIP09923 528 aa24.4■■□□□ 1.5
LRFN4-202ENST00000393952 ABL2P42684 1182 aa24.4■■□□□ 1.5
LRFN4-202ENST00000393952 CAMK2GQ13555 558 aaPredicted RBP24.4■■□□□ 1.5
LRFN4-202ENST00000393952 FBXO43Q4G163 708 aa24.4■■□□□ 1.5
LRFN4-202ENST00000393952 STEAP4Q687X5 459 aa24.4■■□□□ 1.5
LRFN4-202ENST00000393952 SDE2Q6IQ49 451 aa24.4■■□□□ 1.5
LRFN4-202ENST00000393952 PKN3Q6P5Z2 889 aa24.4■■□□□ 1.5
LRFN4-202ENST00000393952 C3orf62Q6ZUJ4 267 aa24.4■■□□□ 1.5
LRFN4-202ENST00000393952 CCNJLQ8IV13 435 aa24.4■■□□□ 1.5
LRFN4-202ENST00000393952 TXNDC5Q8NBS9 432 aaKnown RBP24.4■■□□□ 1.5
LRFN4-202ENST00000393952 TMIEQ8NEW7 156 aa24.4■■□□□ 1.5
LRFN4-202ENST00000393952 PIP4K2CQ8TBX8 421 aa24.4■■□□□ 1.5
LRFN4-202ENST00000393952 RANBP9Q96S59 729 aa24.4■■□□□ 1.5
LRFN4-202ENST00000393952 GABRG3Q99928 467 aa24.4■■□□□ 1.5
LRFN4-202ENST00000393952 PPM1HQ9ULR3 514 aa24.4■■□□□ 1.5
LRFN4-202ENST00000393952 PHTF1Q9UMS5 762 aa24.4■■□□□ 1.5
LRFN4-202ENST00000393952 A0A0J9YYE9 177 aa24.39■■□□□ 1.5
LRFN4-202ENST00000393952 FAM237BA0A1B0GVD1 139 aa24.39■■□□□ 1.5
LRFN4-202ENST00000393952 MAGEB16A2A368 324 aa24.39■■□□□ 1.5
LRFN4-202ENST00000393952 HEATR9A2RTY3 570 aa24.39■■□□□ 1.5
LRFN4-202ENST00000393952 KPNA3O00505 521 aaPredicted RBP24.39■■□□□ 1.5
LRFN4-202ENST00000393952 TRBC1P01850 177 aa24.39■■□□□ 1.5
LRFN4-202ENST00000393952 TSHRP16473 764 aa24.39■■□□□ 1.5
LRFN4-202ENST00000393952 NMBRP28336 390 aa24.39■■□□□ 1.5
LRFN4-202ENST00000393952 METAP1P53582 386 aa24.39■■□□□ 1.5
LRFN4-202ENST00000393952 ZNF805Q5CZA5 627 aa24.39■■□□□ 1.5
LRFN4-202ENST00000393952 TRMT11Q7Z4G4 463 aaKnown RBP24.39■■□□□ 1.5
LRFN4-202ENST00000393952 ZNF669Q96BR6 464 aaPredicted RBP24.39■■□□□ 1.5
LRFN4-202ENST00000393952 ZNF778Q96MU6 729 aa24.39■■□□□ 1.5
LRFN4-202ENST00000393952 RPS6KL1Q9Y6S9 549 aa24.39■■□□□ 1.5
LRFN4-202ENST00000393952 A0A1W2PQ67 120 aa24.38■■□□□ 1.49
LRFN4-202ENST00000393952 TSPAN11A1L157 253 aa24.38■■□□□ 1.49
LRFN4-202ENST00000393952 SYNCRIPO60506 623 aaKnown RBP24.38■■□□□ 1.49
LRFN4-202ENST00000393952 CRYMQ14894 314 aa24.38■■□□□ 1.49
LRFN4-202ENST00000393952 ANKRD20A4Q4UJ75 823 aa24.38■■□□□ 1.49
LRFN4-202ENST00000393952 KIAA1211LQ6NV74 962 aa24.38■■□□□ 1.49
LRFN4-202ENST00000393952 BRAT1Q6PJG6 821 aa24.38■■□□□ 1.49
LRFN4-202ENST00000393952 DSG4Q86SJ6 1040 aa24.38■■□□□ 1.49
LRFN4-202ENST00000393952 TMEM135Q86UB9 458 aa24.38■■□□□ 1.49
LRFN4-202ENST00000393952 MMAAQ8IVH4 418 aaKnown RBP24.38■■□□□ 1.49
LRFN4-202ENST00000393952 RPLP0P6Q8NHW5 317 aa24.38■■□□□ 1.49
LRFN4-202ENST00000393952 BRSK1Q8TDC3 778 aa24.38■■□□□ 1.49
LRFN4-202ENST00000393952 PTCD2Q8WV60 388 aaKnown RBP24.38■■□□□ 1.49
LRFN4-202ENST00000393952 SPOCK2Q92563 424 aa24.38■■□□□ 1.49
LRFN4-202ENST00000393952 MFSD3Q96ES6 412 aa24.38■■□□□ 1.49
LRFN4-202ENST00000393952 FCRL3Q96P31 734 aaPredicted RBP24.38■■□□□ 1.49
LRFN4-202ENST00000393952 MRM3Q9HC36 420 aaKnown RBP24.38■■□□□ 1.49
LRFN4-202ENST00000393952 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP24.38■■□□□ 1.49
LRFN4-202ENST00000393952 DKK3Q9UBP4 350 aa24.38■■□□□ 1.49
LRFN4-202ENST00000393952 PLAAQ9Y263 795 aa24.38■■□□□ 1.49
LRFN4-202ENST00000393952 KCTD3Q9Y597 815 aa24.38■■□□□ 1.49
LRFN4-202ENST00000393952 A0A0U1RQS6 177 aa24.37■■□□□ 1.49
LRFN4-202ENST00000393952 AURKAO14965 403 aa24.37■■□□□ 1.49
LRFN4-202ENST00000393952 LDB2O43679 373 aa24.37■■□□□ 1.49
LRFN4-202ENST00000393952 IL1BP01584 269 aa24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms