RNA–Protein interactions for RNA: ENST00000392334.6

CSNK1D-203, Transcript of casein kinase 1 delta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1D, Length 2,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-203ENST00000392334 PEX1O43933 1283 aa20.05■□□□□ 0.8
CSNK1D-203ENST00000392334 POLBP06746 335 aa20.05■□□□□ 0.8
CSNK1D-203ENST00000392334 CPA3P15088 417 aa20.05■□□□□ 0.8
CSNK1D-203ENST00000392334 GJA1P17302 382 aa20.05■□□□□ 0.8
CSNK1D-203ENST00000392334 PSMB4P28070 264 aa20.05■□□□□ 0.8
CSNK1D-203ENST00000392334 TYK2P29597 1187 aa20.05■□□□□ 0.8
CSNK1D-203ENST00000392334 SESN2P58004 480 aaPredicted RBP20.05■□□□□ 0.8
CSNK1D-203ENST00000392334 CRADDP78560 199 aa20.05■□□□□ 0.8
CSNK1D-203ENST00000392334 CYP4F8P98187 520 aa20.05■□□□□ 0.8
CSNK1D-203ENST00000392334 CREMQ03060 361 aa20.05■□□□□ 0.8
CSNK1D-203ENST00000392334 METTL21CQ5VZV1 264 aa20.05■□□□□ 0.8
CSNK1D-203ENST00000392334 AP1ARQ63HQ0 302 aa20.05■□□□□ 0.8
CSNK1D-203ENST00000392334 LILRA6Q6PI73 481 aa20.05■□□□□ 0.8
CSNK1D-203ENST00000392334 RTL3Q8N8U3 475 aaKnown RBP20.05■□□□□ 0.8
CSNK1D-203ENST00000392334 SHKBP1Q8TBC3 707 aa20.05■□□□□ 0.8
CSNK1D-203ENST00000392334 GDPD5Q8WTR4 605 aa20.05■□□□□ 0.8
CSNK1D-203ENST00000392334 HDAC11Q96DB2 347 aa20.05■□□□□ 0.8
CSNK1D-203ENST00000392334 CERS2Q96G23 380 aa20.05■□□□□ 0.8
CSNK1D-203ENST00000392334 EMILIN2Q9BXX0 1053 aa20.05■□□□□ 0.8
CSNK1D-203ENST00000392334 TRIM4Q9C037 500 aa20.05■□□□□ 0.8
CSNK1D-203ENST00000392334 ZYG11BQ9C0D3 744 aa20.05■□□□□ 0.8
CSNK1D-203ENST00000392334 KLHL4Q9C0H6 718 aa20.05■□□□□ 0.8
CSNK1D-203ENST00000392334 EBF3Q9H4W6 596 aa20.05■□□□□ 0.8
CSNK1D-203ENST00000392334 SYBUQ9NX95 663 aa20.05■□□□□ 0.8
CSNK1D-203ENST00000392334 ATG2AQ2TAZ0 1938 aa20.05■□□□□ 0.8
CSNK1D-203ENST00000392334 TMEM114B3SHH9 223 aa20.04■□□□□ 0.8
CSNK1D-203ENST00000392334 NRG2O14511 850 aaPredicted RBP20.04■□□□□ 0.8
CSNK1D-203ENST00000392334 NCAM2O15394 837 aa20.04■□□□□ 0.8
CSNK1D-203ENST00000392334 CCL16O15467 120 aa20.04■□□□□ 0.8
CSNK1D-203ENST00000392334 RNASEH1O60930 286 aaKnown RBP20.04■□□□□ 0.8
CSNK1D-203ENST00000392334 LRG1P02750 347 aa20.04■□□□□ 0.8
CSNK1D-203ENST00000392334 KLKB1P03952 638 aa20.04■□□□□ 0.8
CSNK1D-203ENST00000392334 UQCRBP14927 111 aa20.04■□□□□ 0.8
CSNK1D-203ENST00000392334 SLC6A4P31645 630 aa20.04■□□□□ 0.8
CSNK1D-203ENST00000392334 RING1Q06587 406 aa20.04■□□□□ 0.8
CSNK1D-203ENST00000392334 EPGNQ6UW88 154 aa20.04■□□□□ 0.8
CSNK1D-203ENST00000392334 RBM23Q86U06 439 aaKnown RBP20.04■□□□□ 0.8
CSNK1D-203ENST00000392334 PYDC1Q8WXC3 89 aa20.04■□□□□ 0.8
CSNK1D-203ENST00000392334 SAMD11Q96NU1 681 aa20.04■□□□□ 0.8
CSNK1D-203ENST00000392334 CDK5RAP1Q96SZ6 601 aaKnown RBP20.04■□□□□ 0.8
CSNK1D-203ENST00000392334 TXNDC16Q9P2K2 825 aa20.04■□□□□ 0.8
CSNK1D-203ENST00000392334 POMPQ9Y244 141 aa20.04■□□□□ 0.8
CSNK1D-203ENST00000392334 DOCK6Q96HP0 2047 aa20.04■□□□□ 0.8
CSNK1D-203ENST00000392334 ZBTB24O43167 697 aaPredicted RBP20.03■□□□□ 0.8
CSNK1D-203ENST00000392334 JCHAINP01591 159 aa20.03■□□□□ 0.8
CSNK1D-203ENST00000392334 F11P03951 625 aa20.03■□□□□ 0.8
CSNK1D-203ENST00000392334 GABRR2P28476 465 aa20.03■□□□□ 0.8
CSNK1D-203ENST00000392334 RGS19P49795 217 aa20.03■□□□□ 0.8
CSNK1D-203ENST00000392334 SERPINB8P50452 374 aa20.03■□□□□ 0.8
CSNK1D-203ENST00000392334 OLIG2Q13516 323 aa20.03■□□□□ 0.8
CSNK1D-203ENST00000392334 GRM2Q14416 872 aa20.03■□□□□ 0.8
CSNK1D-203ENST00000392334 RAB30Q15771 203 aa20.03■□□□□ 0.8
CSNK1D-203ENST00000392334 LGI2Q8N0V4 545 aa20.03■□□□□ 0.8
CSNK1D-203ENST00000392334 FBXW8Q8N3Y1 598 aa20.03■□□□□ 0.8
CSNK1D-203ENST00000392334 ATPAF2Q8N5M1 289 aa20.03■□□□□ 0.8
CSNK1D-203ENST00000392334 ARL14EPQ8N8R7 260 aaPredicted RBP20.03■□□□□ 0.8
CSNK1D-203ENST00000392334 RBBP8Q99708 897 aa20.03■□□□□ 0.8
CSNK1D-203ENST00000392334 RTKNQ9BST9 563 aa20.03■□□□□ 0.8
CSNK1D-203ENST00000392334 CDH19Q9H159 772 aa20.03■□□□□ 0.8
CSNK1D-203ENST00000392334 SNX15Q9NRS6 342 aa20.03■□□□□ 0.8
CSNK1D-203ENST00000392334 RAD54BQ9Y620 910 aa20.03■□□□□ 0.8
CSNK1D-203ENST00000392334 H2AFYO75367 372 aaKnown RBP20.03■□□□□ 0.8
CSNK1D-203ENST00000392334 ZCCHC18P0CG32 403 aa20.03■□□□□ 0.8
CSNK1D-203ENST00000392334 MBL2P11226 248 aaPredicted RBP20.03■□□□□ 0.8
CSNK1D-203ENST00000392334 COX4I1P13073 169 aa20.03■□□□□ 0.8
CSNK1D-203ENST00000392334 TACR2P21452 398 aa20.03■□□□□ 0.8
CSNK1D-203ENST00000392334 CORO1AP31146 461 aaKnown RBP20.03■□□□□ 0.8
CSNK1D-203ENST00000392334 KPNA1P52294 538 aaPredicted RBP20.03■□□□□ 0.8
CSNK1D-203ENST00000392334 MTTPP55157 894 aa20.03■□□□□ 0.8
CSNK1D-203ENST00000392334 NRG1Q02297 640 aaPredicted RBP20.03■□□□□ 0.8
CSNK1D-203ENST00000392334 MSLNQ13421 630 aaPredicted RBP20.03■□□□□ 0.8
CSNK1D-203ENST00000392334 ITGA9Q13797 1035 aa20.03■□□□□ 0.8
CSNK1D-203ENST00000392334 SFT2D3Q587I9 215 aa20.03■□□□□ 0.8
CSNK1D-203ENST00000392334 PPM1JQ5JR12 505 aa20.03■□□□□ 0.8
CSNK1D-203ENST00000392334 GAREM2Q75VX8 874 aa20.03■□□□□ 0.8
CSNK1D-203ENST00000392334 ITIH5Q86UX2 942 aa20.03■□□□□ 0.8
CSNK1D-203ENST00000392334 ZNF354CQ86Y25 554 aa20.03■□□□□ 0.8
CSNK1D-203ENST00000392334 ST13P4Q8IZP2 240 aaPredicted RBP20.03■□□□□ 0.8
CSNK1D-203ENST00000392334 SLC26A7Q8TE54 656 aa20.03■□□□□ 0.8
CSNK1D-203ENST00000392334 DDX50Q9BQ39 737 aaKnown RBP20.03■□□□□ 0.8
CSNK1D-203ENST00000392334 CENPKQ9BS16 269 aa20.03■□□□□ 0.8
CSNK1D-203ENST00000392334 NOL6Q9H6R4 1146 aaKnown RBP20.03■□□□□ 0.8
CSNK1D-203ENST00000392334 IL21Q9HBE4 155 aa20.03■□□□□ 0.8
CSNK1D-203ENST00000392334 ADAMTS6Q9UKP5 1117 aa20.03■□□□□ 0.8
CSNK1D-203ENST00000392334 ARHGAP26Q9UNA1 814 aa20.03■□□□□ 0.8
CSNK1D-203ENST00000392334 RFPL2O75678 378 aa20.02■□□□□ 0.8
CSNK1D-203ENST00000392334 STC2O76061 302 aa20.02■□□□□ 0.8
CSNK1D-203ENST00000392334 GLUD1P00367 558 aa20.02■□□□□ 0.8
CSNK1D-203ENST00000392334 MPOP05164 745 aa20.02■□□□□ 0.8
CSNK1D-203ENST00000392334 SPRP35270 261 aaPredicted RBP20.02■□□□□ 0.8
CSNK1D-203ENST00000392334 ERFP50548 548 aa20.02■□□□□ 0.8
CSNK1D-203ENST00000392334 CLCN4P51793 760 aa20.02■□□□□ 0.8
CSNK1D-203ENST00000392334 LIMK2P53671 638 aa20.02■□□□□ 0.8
CSNK1D-203ENST00000392334 EPHB1P54762 984 aa20.02■□□□□ 0.8
CSNK1D-203ENST00000392334 COG7P83436 770 aa20.02■□□□□ 0.8
CSNK1D-203ENST00000392334 LIN52Q52LA3 116 aa20.02■□□□□ 0.8
CSNK1D-203ENST00000392334 ADGRD2Q7Z7M1 963 aa20.02■□□□□ 0.8
CSNK1D-203ENST00000392334 DEFB107AQ8IZN7 70 aa20.02■□□□□ 0.8
CSNK1D-203ENST00000392334 PIP4K2CQ8TBX8 421 aa20.02■□□□□ 0.8
CSNK1D-203ENST00000392334 STON2Q8WXE9 905 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms