RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 PITX1P78337 314 aaPredicted RBP1.34□□□□□ -2.19
SNORD28B-201ENST00000390993 SLC18A2Q05940 514 aa1.34□□□□□ -2.19
SNORD28B-201ENST00000390993 SLC20A2Q08357 652 aa1.34□□□□□ -2.19
SNORD28B-201ENST00000390993 ARL16Q0P5N6 197 aa1.34□□□□□ -2.19
SNORD28B-201ENST00000390993 GRIK2Q13002 908 aa1.34□□□□□ -2.19
SNORD28B-201ENST00000390993 RBM39Q14498 530 aaKnown RBP1.34□□□□□ -2.19
SNORD28B-201ENST00000390993 NAA25Q14CX7 972 aa1.34□□□□□ -2.19
SNORD28B-201ENST00000390993 RBBP5Q15291 538 aaKnown RBP1.34□□□□□ -2.19
SNORD28B-201ENST00000390993 OASLQ15646 514 aaKnown RBP1.34□□□□□ -2.19
SNORD28B-201ENST00000390993 RPE65Q16518 533 aa1.34□□□□□ -2.19
SNORD28B-201ENST00000390993 ZNF484Q5JVG2 852 aa1.34□□□□□ -2.19
SNORD28B-201ENST00000390993 ZNF772Q68DY9 489 aaPredicted RBP1.34□□□□□ -2.19
SNORD28B-201ENST00000390993 NAPEPLDQ6IQ20 393 aa1.34□□□□□ -2.19
SNORD28B-201ENST00000390993 TRNP1Q6NT89 227 aa1.34□□□□□ -2.19
SNORD28B-201ENST00000390993 XRRA1Q6P2D8 792 aa1.34□□□□□ -2.19
SNORD28B-201ENST00000390993 ZNF449Q6P9G9 518 aa1.34□□□□□ -2.19
SNORD28B-201ENST00000390993 C19orf48Q6RUI8 117 aa1.34□□□□□ -2.19
SNORD28B-201ENST00000390993 CCDC129Q6ZRS4 1044 aa1.34□□□□□ -2.19
SNORD28B-201ENST00000390993 TOGARAM2Q6ZUX3 1019 aa1.34□□□□□ -2.19
SNORD28B-201ENST00000390993 TBC1D26Q86UD7 250 aa1.34□□□□□ -2.19
SNORD28B-201ENST00000390993 TRIM74Q86UV6 250 aa1.34□□□□□ -2.19
SNORD28B-201ENST00000390993 TRIM73Q86UV7 250 aa1.34□□□□□ -2.19
SNORD28B-201ENST00000390993 CPXM2Q8N436 756 aa1.34□□□□□ -2.19
SNORD28B-201ENST00000390993 USP38Q8NB14 1042 aa1.34□□□□□ -2.19
SNORD28B-201ENST00000390993 ZNF248Q8NDW4 579 aa1.34□□□□□ -2.19
SNORD28B-201ENST00000390993 SVIPQ8NHG7 77 aa1.34□□□□□ -2.19
SNORD28B-201ENST00000390993 CEP70Q8NHQ1 597 aa1.34□□□□□ -2.19
SNORD28B-201ENST00000390993 ARRDC2Q8TBH0 407 aa1.34□□□□□ -2.19
SNORD28B-201ENST00000390993 AFG1LQ8WV93 481 aa1.34□□□□□ -2.19
SNORD28B-201ENST00000390993 TRAPPC12Q8WVT3 735 aa1.34□□□□□ -2.19
SNORD28B-201ENST00000390993 SORCS1Q8WY21 1168 aa1.34□□□□□ -2.19
SNORD28B-201ENST00000390993 PPM1EQ8WY54 764 aa1.34□□□□□ -2.19
SNORD28B-201ENST00000390993 TANKQ92844 425 aa1.34□□□□□ -2.19
SNORD28B-201ENST00000390993 USP13Q92995 863 aaPredicted RBP1.34□□□□□ -2.19
SNORD28B-201ENST00000390993 PKP4Q99569 1192 aa1.34□□□□□ -2.19
SNORD28B-201ENST00000390993 CRB3Q9BUF7 120 aa1.34□□□□□ -2.19
SNORD28B-201ENST00000390993 MSTO1Q9BUK6 570 aa1.34□□□□□ -2.19
SNORD28B-201ENST00000390993 CTDSP1Q9GZU7 261 aa1.34□□□□□ -2.19
SNORD28B-201ENST00000390993 CXorf56Q9H5V9 222 aa1.34□□□□□ -2.19
SNORD28B-201ENST00000390993 PLCB1Q9NQ66 1216 aa1.34□□□□□ -2.19
SNORD28B-201ENST00000390993 SMYD2Q9NRG4 433 aa1.34□□□□□ -2.19
SNORD28B-201ENST00000390993 IL1RAPL1Q9NZN1 696 aa1.34□□□□□ -2.19
SNORD28B-201ENST00000390993 TAAR2Q9P1P5 351 aa1.34□□□□□ -2.19
SNORD28B-201ENST00000390993 NLKQ9UBE8 527 aa1.34□□□□□ -2.19
SNORD28B-201ENST00000390993 CD207Q9UJ71 328 aa1.34□□□□□ -2.19
SNORD28B-201ENST00000390993 CDC14AQ9UNH5 594 aa1.34□□□□□ -2.19
SNORD28B-201ENST00000390993 RCE1Q9Y256 329 aa1.34□□□□□ -2.19
SNORD28B-201ENST00000390993 AMDHD2Q9Y303 409 aa1.34□□□□□ -2.19
SNORD28B-201ENST00000390993 IGKV3D-15A0A087WSY6 115 aa1.33□□□□□ -2.2
SNORD28B-201ENST00000390993 A0A0G2JLW4 131 aa1.33□□□□□ -2.2
SNORD28B-201ENST00000390993 C17orf113A0A1B0GUU1 675 aa1.33□□□□□ -2.2
SNORD28B-201ENST00000390993 LOC105371045A0A1W2PR82 267 aa1.33□□□□□ -2.2
SNORD28B-201ENST00000390993 ASPDHA6ND91 283 aa1.33□□□□□ -2.2
SNORD28B-201ENST00000390993 LILRA5A6NI73 299 aa1.33□□□□□ -2.2
SNORD28B-201ENST00000390993 SH2D7A6NKC9 451 aaPredicted RBP1.33□□□□□ -2.2
SNORD28B-201ENST00000390993 PEX12O00623 359 aa1.33□□□□□ -2.2
SNORD28B-201ENST00000390993 NTN3O00634 580 aaPredicted RBP1.33□□□□□ -2.2
SNORD28B-201ENST00000390993 KDM4BO94953 1096 aa1.33□□□□□ -2.2
SNORD28B-201ENST00000390993 AFPP02771 609 aaKnown RBP1.33□□□□□ -2.2
SNORD28B-201ENST00000390993 LINC00271P0C7V0 271 aa1.33□□□□□ -2.2
SNORD28B-201ENST00000390993 HNRNPH1P31943 449 aaKnown RBP1.33□□□□□ -2.2
SNORD28B-201ENST00000390993 TTKP33981 857 aa1.33□□□□□ -2.2
SNORD28B-201ENST00000390993 ADD2P35612 726 aa1.33□□□□□ -2.2
SNORD28B-201ENST00000390993 TMPOP42166 694 aaKnown RBP1.33□□□□□ -2.2
SNORD28B-201ENST00000390993 PTPN9P43378 593 aa1.33□□□□□ -2.2
SNORD28B-201ENST00000390993 HTR3AP46098 478 aa1.33□□□□□ -2.2
SNORD28B-201ENST00000390993 CLCN3P51790 818 aa1.33□□□□□ -2.2
SNORD28B-201ENST00000390993 CLCNKAP51800 687 aa1.33□□□□□ -2.2
SNORD28B-201ENST00000390993 ATP12AP54707 1039 aa1.33□□□□□ -2.2
SNORD28B-201ENST00000390993 SEC61BP60468 96 aaKnown RBP1.33□□□□□ -2.2
SNORD28B-201ENST00000390993 ZBTB17Q13105 803 aa1.33□□□□□ -2.2
SNORD28B-201ENST00000390993 KRT72Q14CN4 511 aa1.33□□□□□ -2.2
SNORD28B-201ENST00000390993 TAF11Q15544 211 aa1.33□□□□□ -2.2
SNORD28B-201ENST00000390993 SLC1A5Q15758 541 aa1.33□□□□□ -2.2
SNORD28B-201ENST00000390993 SLC18A3Q16572 532 aa1.33□□□□□ -2.2
SNORD28B-201ENST00000390993 KRT24Q2M2I5 525 aa1.33□□□□□ -2.2
SNORD28B-201ENST00000390993 ESCO2Q56NI9 601 aa1.33□□□□□ -2.2
SNORD28B-201ENST00000390993 FAM83BQ5T0W9 1011 aa1.33□□□□□ -2.2
SNORD28B-201ENST00000390993 CCNYL2Q5T2Q4 361 aa1.33□□□□□ -2.2
SNORD28B-201ENST00000390993 PLA2G4FQ68DD2 849 aa1.33□□□□□ -2.2
SNORD28B-201ENST00000390993 TTI2Q6NXR4 508 aa1.33□□□□□ -2.2
SNORD28B-201ENST00000390993 WDR73Q6P4I2 378 aa1.33□□□□□ -2.2
SNORD28B-201ENST00000390993 KCTD18Q6PI47 426 aaPredicted RBP1.33□□□□□ -2.2
SNORD28B-201ENST00000390993 CPLX2Q6PUV4 134 aaKnown RBP1.33□□□□□ -2.2
SNORD28B-201ENST00000390993 STXBP4Q6ZWJ1 553 aa1.33□□□□□ -2.2
SNORD28B-201ENST00000390993 RRM2BQ7LG56 351 aa1.33□□□□□ -2.2
SNORD28B-201ENST00000390993 NFE4Q86UQ8 179 aa1.33□□□□□ -2.2
SNORD28B-201ENST00000390993 KMT5CQ86Y97 462 aa1.33□□□□□ -2.2
SNORD28B-201ENST00000390993 CCDC146Q8IYE0 955 aa1.33□□□□□ -2.2
SNORD28B-201ENST00000390993 RNF113BQ8IZP6 322 aaKnown RBP1.33□□□□□ -2.2
SNORD28B-201ENST00000390993 CACNA2D3Q8IZS8 1091 aa1.33□□□□□ -2.2
SNORD28B-201ENST00000390993 PARP16Q8N5Y8 322 aa1.33□□□□□ -2.2
SNORD28B-201ENST00000390993 ENAHQ8N8S7 591 aaPredicted RBP1.33□□□□□ -2.2
SNORD28B-201ENST00000390993 AGBL3Q8NEM8 1001 aa1.33□□□□□ -2.2
SNORD28B-201ENST00000390993 GJC3Q8NFK1 279 aa1.33□□□□□ -2.2
SNORD28B-201ENST00000390993 DBF4BQ8NFT6 615 aa1.33□□□□□ -2.2
SNORD28B-201ENST00000390993 TNIP2Q8NFZ5 429 aa1.33□□□□□ -2.2
SNORD28B-201ENST00000390993 LINS1Q8NG48 757 aa1.33□□□□□ -2.2
SNORD28B-201ENST00000390993 CTCFLQ8NI51 663 aaPredicted RBP1.33□□□□□ -2.2
SNORD28B-201ENST00000390993 LNX1Q8TBB1 728 aaPredicted RBP1.33□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms