RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 BLKP51451 505 aa3.38□□□□□ -1.87
TRAV40-201ENST00000390467 HDAC4P56524 1084 aa3.38□□□□□ -1.87
TRAV40-201ENST00000390467 ZNF155Q12901 538 aaPredicted RBP3.38□□□□□ -1.87
TRAV40-201ENST00000390467 GAGE1Q13065 139 aa3.38□□□□□ -1.87
TRAV40-201ENST00000390467 GAGE4Q13068 117 aa3.38□□□□□ -1.87
TRAV40-201ENST00000390467 ARHGEF6Q15052 776 aa3.38□□□□□ -1.87
TRAV40-201ENST00000390467 EDRF1Q3B7T1 1238 aa3.38□□□□□ -1.87
TRAV40-201ENST00000390467 ADCK5Q3MIX3 580 aa3.38□□□□□ -1.87
TRAV40-201ENST00000390467 C10orf62Q5T681 223 aaPredicted RBP3.38□□□□□ -1.87
TRAV40-201ENST00000390467 ANO1Q5XXA6 986 aa3.38□□□□□ -1.87
TRAV40-201ENST00000390467 LRRC8EQ6NSJ5 796 aa3.38□□□□□ -1.87
TRAV40-201ENST00000390467 FOXL2NBQ6ZUU3 175 aa3.38□□□□□ -1.87
TRAV40-201ENST00000390467 EXOC3L1Q86VI1 746 aa3.38□□□□□ -1.87
TRAV40-201ENST00000390467 C2CD5Q86YS7 1000 aa3.38□□□□□ -1.87
TRAV40-201ENST00000390467 SNAPC3Q92966 411 aa3.38□□□□□ -1.87
TRAV40-201ENST00000390467 CD101Q93033 1021 aa3.38□□□□□ -1.87
TRAV40-201ENST00000390467 MMP28Q9H239 520 aa3.38□□□□□ -1.87
TRAV40-201ENST00000390467 CISD1Q9NZ45 108 aaKnown RBP3.38□□□□□ -1.87
TRAV40-201ENST00000390467 C1RLQ9NZP8 487 aa3.38□□□□□ -1.87
TRAV40-201ENST00000390467 CTNNAL1Q9UBT7 734 aa3.38□□□□□ -1.87
TRAV40-201ENST00000390467 KCNS2Q9ULS6 477 aa3.38□□□□□ -1.87
TRAV40-201ENST00000390467 PCDHGB5Q9Y5G0 923 aa3.38□□□□□ -1.87
TRAV40-201ENST00000390467 PSAT1Q9Y617 370 aa3.38□□□□□ -1.87
TRAV40-201ENST00000390467 hCG_1642624A0A1W2PR95 340 aa3.37□□□□□ -1.87
TRAV40-201ENST00000390467 ARHGAP10A1A4S6 786 aa3.37□□□□□ -1.87
TRAV40-201ENST00000390467 SOCS6O14544 535 aa3.37□□□□□ -1.87
TRAV40-201ENST00000390467 MID1O15344 667 aa3.37□□□□□ -1.87
TRAV40-201ENST00000390467 HNRNPH1P31943 449 aaKnown RBP3.37□□□□□ -1.87
TRAV40-201ENST00000390467 GLIPR1P48060 266 aa3.37□□□□□ -1.87
TRAV40-201ENST00000390467 ZNF132P52740 706 aa3.37□□□□□ -1.87
TRAV40-201ENST00000390467 HILS1P60008 231 aa3.37□□□□□ -1.87
TRAV40-201ENST00000390467 TNFAIP1Q13829 316 aa3.37□□□□□ -1.87
TRAV40-201ENST00000390467 RUNX2Q13950 521 aa3.37□□□□□ -1.87
TRAV40-201ENST00000390467 AMZ1Q400G9 498 aa3.37□□□□□ -1.87
TRAV40-201ENST00000390467 MMEL1Q495T6 779 aa3.37□□□□□ -1.87
TRAV40-201ENST00000390467 MARK2Q7KZI7 788 aaKnown RBP3.37□□□□□ -1.87
TRAV40-201ENST00000390467 TBC1D26Q86UD7 250 aa3.37□□□□□ -1.87
TRAV40-201ENST00000390467 NOXA1Q86UR1 476 aa3.37□□□□□ -1.87
TRAV40-201ENST00000390467 ENAHQ8N8S7 591 aaPredicted RBP3.37□□□□□ -1.87
TRAV40-201ENST00000390467 LSM14AQ8ND56 463 aaKnown RBP3.37□□□□□ -1.87
TRAV40-201ENST00000390467 STAMQ92783 540 aa3.37□□□□□ -1.87
TRAV40-201ENST00000390467 TANKQ92844 425 aa3.37□□□□□ -1.87
TRAV40-201ENST00000390467 PGLYRP2Q96PD5 576 aa3.37□□□□□ -1.87
TRAV40-201ENST00000390467 MMTAG2Q9BU76 263 aaKnown RBP3.37□□□□□ -1.87
TRAV40-201ENST00000390467 PHF7Q9BWX1 381 aaPredicted RBP3.37□□□□□ -1.87
TRAV40-201ENST00000390467 NUF2Q9BZD4 464 aa3.37□□□□□ -1.87
TRAV40-201ENST00000390467 DDX4Q9NQI0 724 aaKnown RBP3.37□□□□□ -1.87
TRAV40-201ENST00000390467 ITM2CQ9NQX7 267 aa3.37□□□□□ -1.87
TRAV40-201ENST00000390467 PLRG1O43660 514 aaKnown RBP3.36□□□□□ -1.87
TRAV40-201ENST00000390467 NDUFB4O95168 129 aa3.36□□□□□ -1.87
TRAV40-201ENST00000390467 PAK4O96013 591 aaPredicted RBP3.36□□□□□ -1.87
TRAV40-201ENST00000390467 ZNF8P17098 575 aaPredicted RBP3.36□□□□□ -1.87
TRAV40-201ENST00000390467 GRK6P43250 576 aa3.36□□□□□ -1.87
TRAV40-201ENST00000390467 FUT6P51993 359 aa3.36□□□□□ -1.87
TRAV40-201ENST00000390467 EFNA5P52803 228 aa3.36□□□□□ -1.87
TRAV40-201ENST00000390467 RHBDL3P58872 404 aa3.36□□□□□ -1.87
TRAV40-201ENST00000390467 TROAPQ12815 778 aa3.36□□□□□ -1.87
TRAV40-201ENST00000390467 NAA25Q14CX7 972 aa3.36□□□□□ -1.87
TRAV40-201ENST00000390467 PDCD2Q16342 344 aaPredicted RBP3.36□□□□□ -1.87
TRAV40-201ENST00000390467 ATP13A5Q4VNC0 1218 aa3.36□□□□□ -1.87
TRAV40-201ENST00000390467 WDR73Q6P4I2 378 aa3.36□□□□□ -1.87
TRAV40-201ENST00000390467 B3GNT6Q6ZMB0 384 aa3.36□□□□□ -1.87
TRAV40-201ENST00000390467 FAM160B2Q86V87 743 aa3.36□□□□□ -1.87
TRAV40-201ENST00000390467 FOXRED2Q8IWF2 684 aa3.36□□□□□ -1.87
TRAV40-201ENST00000390467 IL17RCQ8NAC3 791 aa3.36□□□□□ -1.87
TRAV40-201ENST00000390467 LNX1Q8TBB1 728 aaPredicted RBP3.36□□□□□ -1.87
TRAV40-201ENST00000390467 FIG4Q92562 907 aa3.36□□□□□ -1.87
TRAV40-201ENST00000390467 SH3KBP1Q96B97 665 aa3.36□□□□□ -1.87
TRAV40-201ENST00000390467 ZC3HAV1LQ96H79 300 aaKnown RBP3.36□□□□□ -1.87
TRAV40-201ENST00000390467 TMEM19Q96HH6 336 aa3.36□□□□□ -1.87
TRAV40-201ENST00000390467 UHRF2Q96PU4 802 aa3.36□□□□□ -1.87
TRAV40-201ENST00000390467 EYA3Q99504 573 aa3.36□□□□□ -1.87
TRAV40-201ENST00000390467 PTPRHQ9HD43 1115 aa3.36□□□□□ -1.87
TRAV40-201ENST00000390467 SUFUQ9UMX1 484 aa3.36□□□□□ -1.87
TRAV40-201ENST00000390467 ZNF711Q9Y462 761 aa3.36□□□□□ -1.87
TRAV40-201ENST00000390467 A0A0G2JPF8 293 aa3.35□□□□□ -1.87
TRAV40-201ENST00000390467 HNRNPCL3B7ZW38 293 aa3.35□□□□□ -1.87
TRAV40-201ENST00000390467 IFNL4K9M1U5 179 aa3.35□□□□□ -1.87
TRAV40-201ENST00000390467 HNRNPCL1O60812 293 aaKnown RBP3.35□□□□□ -1.87
TRAV40-201ENST00000390467 NBNO60934 754 aa3.35□□□□□ -1.87
TRAV40-201ENST00000390467 CGAP01215 116 aa3.35□□□□□ -1.87
TRAV40-201ENST00000390467 CFC1BP0CG36 223 aa3.35□□□□□ -1.87
TRAV40-201ENST00000390467 CFC1P0CG37 223 aa3.35□□□□□ -1.87
TRAV40-201ENST00000390467 HNRNPCL4P0DMR1 293 aa3.35□□□□□ -1.87
TRAV40-201ENST00000390467 SLC2A4P14672 509 aa3.35□□□□□ -1.87
TRAV40-201ENST00000390467 PTPN2P17706 415 aa3.35□□□□□ -1.87
TRAV40-201ENST00000390467 CLCN3P51790 818 aa3.35□□□□□ -1.87
TRAV40-201ENST00000390467 NR1H2P55055 460 aa3.35□□□□□ -1.87
TRAV40-201ENST00000390467 ECT2LQ008S8 904 aa3.35□□□□□ -1.87
TRAV40-201ENST00000390467 CHRNDQ07001 517 aa3.35□□□□□ -1.87
TRAV40-201ENST00000390467 SLC20A2Q08357 652 aa3.35□□□□□ -1.87
TRAV40-201ENST00000390467 ANKRD1Q15327 319 aa3.35□□□□□ -1.87
TRAV40-201ENST00000390467 PPP6R3Q5H9R7 873 aaPredicted RBP3.35□□□□□ -1.87
TRAV40-201ENST00000390467 ANKRD54Q6NXT1 300 aa3.35□□□□□ -1.87
TRAV40-201ENST00000390467 SLC9B2Q86UD5 537 aa3.35□□□□□ -1.87
TRAV40-201ENST00000390467 ODF3L1Q8IXM7 274 aa3.35□□□□□ -1.87
TRAV40-201ENST00000390467 KIAA2013Q8IYS2 634 aa3.35□□□□□ -1.87
TRAV40-201ENST00000390467 MAB21L3Q8N8X9 362 aa3.35□□□□□ -1.87
TRAV40-201ENST00000390467 TMEM255BQ8WV15 326 aa3.35□□□□□ -1.87
TRAV40-201ENST00000390467 RND1Q92730 232 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms