RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 PCDHB18PQ96TA0 734 aa23.31■■□□□ 1.32
U2AF1-202ENST00000380276 APOOQ9BUR5 198 aa23.31■■□□□ 1.32
U2AF1-202ENST00000380276 PCDH12Q9NPG4 1184 aa23.31■■□□□ 1.32
U2AF1-202ENST00000380276 MFHAS1Q9Y4C4 1052 aa23.31■■□□□ 1.32
U2AF1-202ENST00000380276 KIF26BQ2KJY2 2108 aa23.3■■□□□ 1.32
U2AF1-202ENST00000380276 B8ZZF3 427 aa23.3■■□□□ 1.32
U2AF1-202ENST00000380276 NTN3O00634 580 aaPredicted RBP23.3■■□□□ 1.32
U2AF1-202ENST00000380276 TNFP01375 233 aa23.3■■□□□ 1.32
U2AF1-202ENST00000380276 PRKCGP05129 697 aa23.3■■□□□ 1.32
U2AF1-202ENST00000380276 HGFP14210 728 aa23.3■■□□□ 1.32
U2AF1-202ENST00000380276 SUOXP51687 545 aa23.3■■□□□ 1.32
U2AF1-202ENST00000380276 INHBCP55103 352 aa23.3■■□□□ 1.32
U2AF1-202ENST00000380276 PTP4A2Q12974 167 aa23.3■■□□□ 1.32
U2AF1-202ENST00000380276 SERINC3Q13530 473 aa23.3■■□□□ 1.32
U2AF1-202ENST00000380276 CYTH1Q15438 398 aa23.3■■□□□ 1.32
U2AF1-202ENST00000380276 PARP15Q460N3 678 aa23.3■■□□□ 1.32
U2AF1-202ENST00000380276 DNAJC24Q6P3W2 148 aa23.3■■□□□ 1.32
U2AF1-202ENST00000380276 NYAP1Q6ZVC0 841 aa23.3■■□□□ 1.32
U2AF1-202ENST00000380276 Q8N9G6 341 aaPredicted RBP23.3■■□□□ 1.32
U2AF1-202ENST00000380276 SNRNP27Q8WVK2 155 aaKnown RBP23.3■■□□□ 1.32
U2AF1-202ENST00000380276 CCNL2Q96S94 520 aaPredicted RBP23.3■■□□□ 1.32
U2AF1-202ENST00000380276 SUV39H2Q9H5I1 410 aa23.3■■□□□ 1.32
U2AF1-202ENST00000380276 HELZ2Q9BYK8 2649 aaKnown RBP23.29■■□□□ 1.32
U2AF1-202ENST00000380276 MGAQ8IWI9 3026 aa23.29■■□□□ 1.32
U2AF1-202ENST00000380276 D6RAR5 112 aa23.29■■□□□ 1.32
U2AF1-202ENST00000380276 EPHB6O15197 1021 aa23.29■■□□□ 1.32
U2AF1-202ENST00000380276 JMJD7P0C870 316 aa23.29■■□□□ 1.32
U2AF1-202ENST00000380276 UNGP13051 313 aaPredicted RBP23.29■■□□□ 1.32
U2AF1-202ENST00000380276 SLC5A2P31639 672 aa23.29■■□□□ 1.32
U2AF1-202ENST00000380276 LIG3P49916 1009 aa23.29■■□□□ 1.32
U2AF1-202ENST00000380276 JAM2P57087 298 aa23.29■■□□□ 1.32
U2AF1-202ENST00000380276 C1QBPQ07021 282 aaKnown RBP23.29■■□□□ 1.32
U2AF1-202ENST00000380276 UGP2Q16851 508 aa23.29■■□□□ 1.32
U2AF1-202ENST00000380276 CLEC16AQ2KHT3 1053 aa23.29■■□□□ 1.32
U2AF1-202ENST00000380276 LVRNQ6Q4G3 990 aa23.29■■□□□ 1.32
U2AF1-202ENST00000380276 C3orf20Q8ND61 904 aa23.29■■□□□ 1.32
U2AF1-202ENST00000380276 MED8Q96G25 268 aa23.29■■□□□ 1.32
U2AF1-202ENST00000380276 WDR92Q96MX6 357 aa23.29■■□□□ 1.32
U2AF1-202ENST00000380276 MCEEQ96PE7 176 aa23.29■■□□□ 1.32
U2AF1-202ENST00000380276 PISDQ9UG56 409 aa23.29■■□□□ 1.32
U2AF1-202ENST00000380276 TMX2-CTNND1H3BSU7 103 aa23.28■■□□□ 1.32
U2AF1-202ENST00000380276 SLC28A2O43868 658 aa23.28■■□□□ 1.32
U2AF1-202ENST00000380276 DESP17661 470 aa23.28■■□□□ 1.32
U2AF1-202ENST00000380276 UGT1A5P35504 534 aa23.28■■□□□ 1.32
U2AF1-202ENST00000380276 TPI1P60174 286 aa23.28■■□□□ 1.32
U2AF1-202ENST00000380276 EIF3IQ13347 325 aaKnown RBP23.28■■□□□ 1.32
U2AF1-202ENST00000380276 GRM3Q14832 879 aa23.28■■□□□ 1.32
U2AF1-202ENST00000380276 KRT31Q15323 416 aa23.28■■□□□ 1.32
U2AF1-202ENST00000380276 PDXPQ96GD0 296 aa23.28■■□□□ 1.32
U2AF1-202ENST00000380276 TMEM74Q96NL1 305 aa23.28■■□□□ 1.32
U2AF1-202ENST00000380276 LRRN3Q9H3W5 708 aa23.28■■□□□ 1.32
U2AF1-202ENST00000380276 MOSPD1Q9UJG1 213 aa23.28■■□□□ 1.32
U2AF1-202ENST00000380276 FZD10Q9ULW2 581 aa23.28■■□□□ 1.32
U2AF1-202ENST00000380276 SSUH2Q9Y2M2 353 aa23.28■■□□□ 1.32
U2AF1-202ENST00000380276 LRRK1Q38SD2 2015 aa23.27■■□□□ 1.32
U2AF1-202ENST00000380276 ATXN8OSP0DMR3 200 aa23.27■■□□□ 1.32
U2AF1-202ENST00000380276 TAF8Q7Z7C8 310 aa23.27■■□□□ 1.32
U2AF1-202ENST00000380276 PHF13Q86YI8 300 aaPredicted RBP23.27■■□□□ 1.32
U2AF1-202ENST00000380276 NEK11Q8NG66 645 aa23.27■■□□□ 1.32
U2AF1-202ENST00000380276 CELF6Q96J87 481 aaKnown RBP23.27■■□□□ 1.32
U2AF1-202ENST00000380276 ATP8A1Q9Y2Q0 1164 aa23.27■■□□□ 1.32
U2AF1-202ENST00000380276 A0A1W2PQM1 296 aa23.26■■□□□ 1.31
U2AF1-202ENST00000380276 SIGLEC16A6NMB1 481 aa23.26■■□□□ 1.31
U2AF1-202ENST00000380276 J3KR12 359 aa23.26■■□□□ 1.31
U2AF1-202ENST00000380276 CACNB4O00305 520 aaPredicted RBP23.26■■□□□ 1.31
U2AF1-202ENST00000380276 FGF10O15520 208 aaPredicted RBP23.26■■□□□ 1.31
U2AF1-202ENST00000380276 ZNF143P52747 638 aaPredicted RBP23.26■■□□□ 1.31
U2AF1-202ENST00000380276 GSCP56915 257 aaPredicted RBP23.26■■□□□ 1.31
U2AF1-202ENST00000380276 MTM1Q13496 603 aa23.26■■□□□ 1.31
U2AF1-202ENST00000380276 TGIF1Q15583 401 aa23.26■■□□□ 1.31
U2AF1-202ENST00000380276 DCUN1D2Q6PH85 259 aa23.26■■□□□ 1.31
U2AF1-202ENST00000380276 BRAT1Q6PJG6 821 aa23.26■■□□□ 1.31
U2AF1-202ENST00000380276 USP53Q70EK8 1073 aa23.26■■□□□ 1.31
U2AF1-202ENST00000380276 PRICKLE2Q7Z3G6 844 aa23.26■■□□□ 1.31
U2AF1-202ENST00000380276 CAMK1DQ8IU85 385 aa23.26■■□□□ 1.31
U2AF1-202ENST00000380276 CCNJLQ8IV13 435 aa23.26■■□□□ 1.31
U2AF1-202ENST00000380276 UMODL1-AS1Q8N2C9 162 aa23.26■■□□□ 1.31
U2AF1-202ENST00000380276 OR6C4Q8NGE1 309 aa23.26■■□□□ 1.31
U2AF1-202ENST00000380276 HCAR2Q8TDS4 363 aa23.26■■□□□ 1.31
U2AF1-202ENST00000380276 GPATCH2LQ9NWQ4 482 aa23.26■■□□□ 1.31
U2AF1-202ENST00000380276 ATXN7L1Q9ULK2 861 aaPredicted RBP23.26■■□□□ 1.31
U2AF1-202ENST00000380276 LOXL2Q9Y4K0 774 aa23.26■■□□□ 1.31
U2AF1-202ENST00000380276 ZNF462Q96JM2 2506 aa23.26■■□□□ 1.31
U2AF1-202ENST00000380276 ANKRD36A6QL64 1941 aa23.25■■□□□ 1.31
U2AF1-202ENST00000380276 WASH4PA8MWX3 477 aa23.25■■□□□ 1.31
U2AF1-202ENST00000380276 B4DGG1 531 aa23.25■■□□□ 1.31
U2AF1-202ENST00000380276 MMP12P39900 470 aa23.25■■□□□ 1.31
U2AF1-202ENST00000380276 PLA2G15Q8NCC3 412 aa23.25■■□□□ 1.31
U2AF1-202ENST00000380276 FAM46DQ8NEK8 389 aa23.25■■□□□ 1.31
U2AF1-202ENST00000380276 ZNF641Q96N77 438 aaPredicted RBP23.25■■□□□ 1.31
U2AF1-202ENST00000380276 ARHGAP9Q9BRR9 750 aa23.25■■□□□ 1.31
U2AF1-202ENST00000380276 ATP13A3Q9H7F0 1226 aa23.25■■□□□ 1.31
U2AF1-202ENST00000380276 SUDS3Q9H7L9 328 aaPredicted RBP23.25■■□□□ 1.31
U2AF1-202ENST00000380276 PCDHGA7Q9Y5G6 932 aa23.25■■□□□ 1.31
U2AF1-202ENST00000380276 HEMK1Q9Y5R4 338 aaPredicted RBP23.25■■□□□ 1.31
U2AF1-202ENST00000380276 LRP4O75096 1905 aa23.25■■□□□ 1.31
U2AF1-202ENST00000380276 ATMQ13315 3056 aa23.24■■□□□ 1.31
U2AF1-202ENST00000380276 TSPAN11A1L157 253 aa23.24■■□□□ 1.31
U2AF1-202ENST00000380276 BUB1BO60566 1050 aaPredicted RBP23.24■■□□□ 1.31
U2AF1-202ENST00000380276 SERPINA4P29622 427 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms