RNA–Protein interactions for RNA: ENST00000377194.7

TRIM27-201, Transcript of tripartite motif containing 27, humanhuman

TSL 1 (best) BASIC

Gene TRIM27, Length 2,686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-201ENST00000377194 ZNF781Q8N8C0 355 aa17.27■□□□□ 0.35
TRIM27-201ENST00000377194 ARL10Q8N8L6 244 aa17.27■□□□□ 0.35
TRIM27-201ENST00000377194 FTHL17Q9BXU8 183 aa17.27■□□□□ 0.35
TRIM27-201ENST00000377194 PLGRKTQ9HBL7 147 aa17.27■□□□□ 0.35
TRIM27-201ENST00000377194 EBF1Q9UH73 591 aa17.27■□□□□ 0.35
TRIM27-201ENST00000377194 RNF11Q9Y3C5 154 aa17.27■□□□□ 0.35
TRIM27-201ENST00000377194 KANSL1LA0AUZ9 987 aa17.26■□□□□ 0.35
TRIM27-201ENST00000377194 PHGDHO43175 533 aaKnown RBP17.26■□□□□ 0.35
TRIM27-201ENST00000377194 AHSGP02765 367 aa17.26■□□□□ 0.35
TRIM27-201ENST00000377194 ELNP15502 786 aa17.26■□□□□ 0.35
TRIM27-201ENST00000377194 ARNTP27540 789 aa17.26■□□□□ 0.35
TRIM27-201ENST00000377194 EPHA3P29320 983 aa17.26■□□□□ 0.35
TRIM27-201ENST00000377194 CYP2C18P33260 490 aa17.26■□□□□ 0.35
TRIM27-201ENST00000377194 CSRP3P50461 194 aa17.26■□□□□ 0.35
TRIM27-201ENST00000377194 CDK9P50750 372 aaKnown RBP17.26■□□□□ 0.35
TRIM27-201ENST00000377194 FCGRTP55899 365 aa17.26■□□□□ 0.35
TRIM27-201ENST00000377194 ZNF33AQ06730 810 aa17.26■□□□□ 0.35
TRIM27-201ENST00000377194 BRMS1LQ5PSV4 323 aa17.26■□□□□ 0.35
TRIM27-201ENST00000377194 ESRP1Q6NXG1 681 aaKnown RBP17.26■□□□□ 0.35
TRIM27-201ENST00000377194 PTAR1Q7Z6K3 402 aaPredicted RBP17.26■□□□□ 0.35
TRIM27-201ENST00000377194 TICAM1Q8IUC6 712 aa17.26■□□□□ 0.35
TRIM27-201ENST00000377194 GFM2Q969S9 779 aaKnown RBP17.26■□□□□ 0.35
TRIM27-201ENST00000377194 FCRL5Q96RD9 977 aa17.26■□□□□ 0.35
TRIM27-201ENST00000377194 TBL1YQ9BQ87 522 aa17.26■□□□□ 0.35
TRIM27-201ENST00000377194 NMRAL1Q9HBL8 299 aa17.26■□□□□ 0.35
TRIM27-201ENST00000377194 GLOD4Q9HC38 313 aa17.26■□□□□ 0.35
TRIM27-201ENST00000377194 ABI2Q9NYB9 513 aaPredicted RBP17.26■□□□□ 0.35
TRIM27-201ENST00000377194 SLC2A6Q9UGQ3 507 aa17.26■□□□□ 0.35
TRIM27-201ENST00000377194 HS3ST4Q9Y661 456 aa17.26■□□□□ 0.35
TRIM27-201ENST00000377194 MATN3O15232 486 aa17.26■□□□□ 0.35
TRIM27-201ENST00000377194 TIMM44O43615 452 aa17.26■□□□□ 0.35
TRIM27-201ENST00000377194 SERPINB7O75635 380 aa17.26■□□□□ 0.35
TRIM27-201ENST00000377194 MPOP05164 745 aa17.26■□□□□ 0.35
TRIM27-201ENST00000377194 HLA-DQB2P05538 268 aa17.26■□□□□ 0.35
TRIM27-201ENST00000377194 SBK3P0C264 359 aa17.26■□□□□ 0.35
TRIM27-201ENST00000377194 TCN1P20061 433 aaPredicted RBP17.26■□□□□ 0.35
TRIM27-201ENST00000377194 HALP42357 657 aa17.26■□□□□ 0.35
TRIM27-201ENST00000377194 CSE1LP55060 971 aaKnown RBP17.26■□□□□ 0.35
TRIM27-201ENST00000377194 CTBP1Q13363 440 aa17.26■□□□□ 0.35
TRIM27-201ENST00000377194 DDR2Q16832 855 aa17.26■□□□□ 0.35
TRIM27-201ENST00000377194 PKN3Q6P5Z2 889 aa17.26■□□□□ 0.35
TRIM27-201ENST00000377194 LINC00523Q86TU6 105 aa17.26■□□□□ 0.35
TRIM27-201ENST00000377194 SPNS2Q8IVW8 549 aa17.26■□□□□ 0.35
TRIM27-201ENST00000377194 BHLHE22Q8NFJ8 381 aaPredicted RBP17.26■□□□□ 0.35
TRIM27-201ENST00000377194 CDRT15Q96T59 188 aa17.26■□□□□ 0.35
TRIM27-201ENST00000377194 FICDQ9BVA6 458 aa17.26■□□□□ 0.35
TRIM27-201ENST00000377194 SEMA6AQ9H2E6 1030 aa17.26■□□□□ 0.35
TRIM27-201ENST00000377194 FAM96AQ9H5X1 160 aa17.26■□□□□ 0.35
TRIM27-201ENST00000377194 AAR2Q9Y312 384 aaKnown RBP17.26■□□□□ 0.35
TRIM27-201ENST00000377194 TMEM247A6NEH6 219 aa17.25■□□□□ 0.35
TRIM27-201ENST00000377194 KCNU1A8MYU2 1149 aa17.25■□□□□ 0.35
TRIM27-201ENST00000377194 TK2O00142 265 aa17.25■□□□□ 0.35
TRIM27-201ENST00000377194 CA12O43570 354 aa17.25■□□□□ 0.35
TRIM27-201ENST00000377194 PMPCBO75439 489 aa17.25■□□□□ 0.35
TRIM27-201ENST00000377194 VAPBO95292 243 aa17.25■□□□□ 0.35
TRIM27-201ENST00000377194 PSMC3P17980 439 aa17.25■□□□□ 0.35
TRIM27-201ENST00000377194 FGFR3P22607 806 aa17.25■□□□□ 0.35
TRIM27-201ENST00000377194 AVPR1AP37288 418 aa17.25■□□□□ 0.35
TRIM27-201ENST00000377194 NDST2P52849 883 aa17.25■□□□□ 0.35
TRIM27-201ENST00000377194 FSCBQ5H9T9 825 aa17.25■□□□□ 0.35
TRIM27-201ENST00000377194 TMEM53Q6P2H8 277 aa17.25■□□□□ 0.35
TRIM27-201ENST00000377194 MAPK15Q8TD08 544 aa17.25■□□□□ 0.35
TRIM27-201ENST00000377194 GPR22Q99680 433 aa17.25■□□□□ 0.35
TRIM27-201ENST00000377194 C1QTNF1Q9BXJ1 281 aa17.25■□□□□ 0.35
TRIM27-201ENST00000377194 OSBPL6Q9BZF3 934 aa17.25■□□□□ 0.35
TRIM27-201ENST00000377194 RBM22Q9NW64 420 aaKnown RBP eCLIP17.25■□□□□ 0.357e-6■■■■□ 24.6
TRIM27-201ENST00000377194 NOD1Q9Y239 953 aa17.25■□□□□ 0.35
TRIM27-201ENST00000377194 PCDHB12Q9Y5F1 795 aa17.25■□□□□ 0.35
TRIM27-201ENST00000377194 E9PAM4 449 aa17.25■□□□□ 0.35
TRIM27-201ENST00000377194 TYMPP19971 482 aa17.25■□□□□ 0.35
TRIM27-201ENST00000377194 PRDX6P30041 224 aa17.25■□□□□ 0.35
TRIM27-201ENST00000377194 CHRNA4P43681 627 aa17.25■□□□□ 0.35
TRIM27-201ENST00000377194 MS4A2Q01362 244 aa17.25■□□□□ 0.35
TRIM27-201ENST00000377194 PFKPQ01813 784 aa17.25■□□□□ 0.35
TRIM27-201ENST00000377194 PCID2Q5JVF3 399 aa17.25■□□□□ 0.35
TRIM27-201ENST00000377194 MFSD6LQ8IWD5 586 aa17.25■□□□□ 0.35
TRIM27-201ENST00000377194 UROC1Q96N76 676 aa17.25■□□□□ 0.35
TRIM27-201ENST00000377194 OR52B2Q96RD2 323 aa17.25■□□□□ 0.35
TRIM27-201ENST00000377194 NOL6Q9H6R4 1146 aaKnown RBP17.25■□□□□ 0.35
TRIM27-201ENST00000377194 NYNRINQ9P2P1 1898 aaKnown RBP17.25■□□□□ 0.35
TRIM27-201ENST00000377194 GOLGA8QA0A0J9YX86 632 aa17.24■□□□□ 0.35
TRIM27-201ENST00000377194 GOLGA8OA6NCC3 632 aa17.24■□□□□ 0.35
TRIM27-201ENST00000377194 GOLGA8NF8WBI6 632 aa17.24■□□□□ 0.35
TRIM27-201ENST00000377194 STX16-NPEPL1H3BU86 382 aa17.24■□□□□ 0.35
TRIM27-201ENST00000377194 FBP2O00757 339 aa17.24■□□□□ 0.35
TRIM27-201ENST00000377194 GRK4P32298 578 aa17.24■□□□□ 0.35
TRIM27-201ENST00000377194 ADRA1AP35348 466 aa17.24■□□□□ 0.35
TRIM27-201ENST00000377194 CCR10P46092 362 aa17.24■□□□□ 0.35
TRIM27-201ENST00000377194 GLRBP48167 497 aa17.24■□□□□ 0.35
TRIM27-201ENST00000377194 ARCN1P48444 511 aaKnown RBP17.24■□□□□ 0.35
TRIM27-201ENST00000377194 MPP1Q00013 466 aa17.24■□□□□ 0.35
TRIM27-201ENST00000377194 PDAP1Q13442 181 aaKnown RBP17.24■□□□□ 0.35
TRIM27-201ENST00000377194 ZNF460Q14592 562 aa17.24■□□□□ 0.35
TRIM27-201ENST00000377194 TGFBIQ15582 683 aa17.24■□□□□ 0.35
TRIM27-201ENST00000377194 CLLU1OSQ5K130 101 aa17.24■□□□□ 0.35
TRIM27-201ENST00000377194 EPGNQ6UW88 154 aa17.24■□□□□ 0.35
TRIM27-201ENST00000377194 ALDH16A1Q8IZ83 802 aa17.24■□□□□ 0.35
TRIM27-201ENST00000377194 FAM156AQ8NDB6 213 aa17.24■□□□□ 0.35
TRIM27-201ENST00000377194 ADCY4Q8NFM4 1077 aa17.24■□□□□ 0.35
TRIM27-201ENST00000377194 TRIM62Q9BVG3 475 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms