RNA–Protein interactions for RNA: ENST00000376806.9

HLA-A-202, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 1,854 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-202ENST00000376806 SP7Q8TDD2 431 aaPredicted RBP16.9■□□□□ 0.3
HLA-A-202ENST00000376806 KCTD4Q8WVF5 259 aa16.9■□□□□ 0.3
HLA-A-202ENST00000376806 TMA16Q96EY4 203 aaKnown RBP16.9■□□□□ 0.3
HLA-A-202ENST00000376806 DNAJC1Q96KC8 554 aaKnown RBP16.9■□□□□ 0.3
HLA-A-202ENST00000376806 GCNAQ96QF7 691 aa16.9■□□□□ 0.3
HLA-A-202ENST00000376806 CFAP97Q9P2B7 532 aa16.9■□□□□ 0.3
HLA-A-202ENST00000376806 HEY2Q9UBP5 337 aa16.9■□□□□ 0.3
HLA-A-202ENST00000376806 MARCOQ9UEW3 520 aaPredicted RBP16.9■□□□□ 0.3
HLA-A-202ENST00000376806 VPS28Q9UK41 221 aa16.9■□□□□ 0.3
HLA-A-202ENST00000376806 RIMKLBQ9ULI2 386 aa16.9■□□□□ 0.3
HLA-A-202ENST00000376806 ACOT9Q9Y305 439 aa16.9■□□□□ 0.3
HLA-A-202ENST00000376806 TRAV19A0A0A6YYK7 116 aa16.9■□□□□ 0.3
HLA-A-202ENST00000376806 C2orf71A6NGG8 1288 aa16.9■□□□□ 0.3
HLA-A-202ENST00000376806 OR51F1A6NGY5 319 aa16.9■□□□□ 0.3
HLA-A-202ENST00000376806 NRG2O14511 850 aaPredicted RBP16.9■□□□□ 0.3
HLA-A-202ENST00000376806 PIRTP0C851 137 aa16.9■□□□□ 0.3
HLA-A-202ENST00000376806 KITP10721 976 aa16.9■□□□□ 0.3
HLA-A-202ENST00000376806 CSKP41240 450 aa16.9■□□□□ 0.3
HLA-A-202ENST00000376806 TAS2R39P59534 338 aa16.9■□□□□ 0.3
HLA-A-202ENST00000376806 NSUN2Q08J23 767 aaKnown RBP eCLIP16.9■□□□□ 0.3
HLA-A-202ENST00000376806 CDH18Q13634 790 aa16.9■□□□□ 0.3
HLA-A-202ENST00000376806 ITGA9Q13797 1035 aa16.9■□□□□ 0.3
HLA-A-202ENST00000376806 ZNF789Q5FWF6 425 aa16.9■□□□□ 0.3
HLA-A-202ENST00000376806 FBXW10Q5XX13 1052 aa16.9■□□□□ 0.3
HLA-A-202ENST00000376806 CLNKQ7Z7G1 428 aa16.9■□□□□ 0.3
HLA-A-202ENST00000376806 TTC16Q8NEE8 873 aa16.9■□□□□ 0.3
HLA-A-202ENST00000376806 OR6Y1Q8NGX8 325 aa16.9■□□□□ 0.3
HLA-A-202ENST00000376806 FEM1AQ9BSK4 669 aa16.9■□□□□ 0.3
HLA-A-202ENST00000376806 EMILIN2Q9BXX0 1053 aa16.9■□□□□ 0.3
HLA-A-202ENST00000376806 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.9■□□□□ 0.3
HLA-A-202ENST00000376806 LHX3Q9UBR4 397 aa16.9■□□□□ 0.3
HLA-A-202ENST00000376806 SH3BP1Q9Y3L3 701 aa16.9■□□□□ 0.3
HLA-A-202ENST00000376806 OR51B4Q9Y5P0 310 aa16.9■□□□□ 0.3
HLA-A-202ENST00000376806 A0A087X1B8 175 aa16.89■□□□□ 0.29
HLA-A-202ENST00000376806 A0A1W2PRU2 124 aa16.89■□□□□ 0.29
HLA-A-202ENST00000376806 LCHNA4D1U4 455 aa16.89■□□□□ 0.29
HLA-A-202ENST00000376806 TK2O00142 265 aa16.89■□□□□ 0.29
HLA-A-202ENST00000376806 DNAJC6O75061 913 aa16.89■□□□□ 0.29
HLA-A-202ENST00000376806 RPP40O75818 363 aaKnown RBP16.89■□□□□ 0.29
HLA-A-202ENST00000376806 CSPG5O95196 566 aa16.89■□□□□ 0.29
HLA-A-202ENST00000376806 GLUD1P00367 558 aa16.89■□□□□ 0.29
HLA-A-202ENST00000376806 MYL4P12829 197 aa16.89■□□□□ 0.29
HLA-A-202ENST00000376806 SERPINB3P29508 390 aa16.89■□□□□ 0.29
HLA-A-202ENST00000376806 CTNNB1P35222 781 aa16.89■□□□□ 0.29
HLA-A-202ENST00000376806 SLC12A2P55011 1212 aa16.89■□□□□ 0.29
HLA-A-202ENST00000376806 ERVFC1P60507 584 aa16.89■□□□□ 0.29
HLA-A-202ENST00000376806 SREK1Q8WXA9 508 aaKnown RBP16.89■□□□□ 0.29
HLA-A-202ENST00000376806 TBATAQ96M53 351 aa16.89■□□□□ 0.29
HLA-A-202ENST00000376806 SORT1Q99523 831 aa16.89■□□□□ 0.29
HLA-A-202ENST00000376806 OMDQ99983 421 aa16.89■□□□□ 0.29
HLA-A-202ENST00000376806 LBHD1Q9BQE6 289 aaPredicted RBP16.89■□□□□ 0.29
HLA-A-202ENST00000376806 ASAH2Q9NR71 780 aa16.89■□□□□ 0.29
HLA-A-202ENST00000376806 MARCH4Q9P2E8 410 aaPredicted RBP16.89■□□□□ 0.29
HLA-A-202ENST00000376806 VPS51Q9UID3 782 aa16.89■□□□□ 0.29
HLA-A-202ENST00000376806 DNAJC16Q9Y2G8 782 aa16.89■□□□□ 0.29
HLA-A-202ENST00000376806 ZNF510Q9Y2H8 683 aa16.89■□□□□ 0.29
HLA-A-202ENST00000376806 ARIH1Q9Y4X5 557 aaPredicted RBP16.89■□□□□ 0.29
HLA-A-202ENST00000376806 SPO11Q9Y5K1 396 aa16.89■□□□□ 0.29
HLA-A-202ENST00000376806 IRAK3Q9Y616 596 aa16.89■□□□□ 0.29
HLA-A-202ENST00000376806 BUD23O43709 281 aaKnown RBP16.88■□□□□ 0.29
HLA-A-202ENST00000376806 RASSF9O75901 435 aa16.88■□□□□ 0.29
HLA-A-202ENST00000376806 ATP5HO75947 161 aa16.88■□□□□ 0.29
HLA-A-202ENST00000376806 GJA1P17302 382 aa16.88■□□□□ 0.29
HLA-A-202ENST00000376806 TARSP26639 723 aaKnown RBP16.88■□□□□ 0.29
HLA-A-202ENST00000376806 MAGEA10P43363 369 aaPredicted RBP16.88■□□□□ 0.29
HLA-A-202ENST00000376806 ABCE1P61221 599 aaKnown RBP16.88■□□□□ 0.29
HLA-A-202ENST00000376806 PLPP4Q5VZY2 271 aa16.88■□□□□ 0.29
HLA-A-202ENST00000376806 LRRC8EQ6NSJ5 796 aa16.88■□□□□ 0.29
HLA-A-202ENST00000376806 PSRC1Q6PGN9 363 aaPredicted RBP16.88■□□□□ 0.29
HLA-A-202ENST00000376806 ZYG11AQ6WRX3 759 aa16.88■□□□□ 0.29
HLA-A-202ENST00000376806 HTR3DQ70Z44 454 aa16.88■□□□□ 0.29
HLA-A-202ENST00000376806 ASRGL1Q7L266 308 aa16.88■□□□□ 0.29
HLA-A-202ENST00000376806 MFN1Q8IWA4 741 aa16.88■□□□□ 0.29
HLA-A-202ENST00000376806 CPXM2Q8N436 756 aa16.88■□□□□ 0.29
HLA-A-202ENST00000376806 DCAF4L2Q8NA75 395 aa16.88■□□□□ 0.29
HLA-A-202ENST00000376806 TDRD5Q8NAT2 981 aaKnown RBP16.88■□□□□ 0.29
HLA-A-202ENST00000376806 OR13C4Q8NGS5 318 aa16.88■□□□□ 0.29
HLA-A-202ENST00000376806 PPP4R1Q8TF05 950 aa16.88■□□□□ 0.29
HLA-A-202ENST00000376806 SLC22A17Q8WUG5 538 aa16.88■□□□□ 0.29
HLA-A-202ENST00000376806 STYXQ8WUJ0 223 aa16.88■□□□□ 0.29
HLA-A-202ENST00000376806 ALG14Q96F25 216 aa16.88■□□□□ 0.29
HLA-A-202ENST00000376806 SCYL1Q96KG9 808 aa16.88■□□□□ 0.29
HLA-A-202ENST00000376806 NDNQ99608 321 aa16.88■□□□□ 0.29
HLA-A-202ENST00000376806 RAD9AQ99638 391 aa16.88■□□□□ 0.29
HLA-A-202ENST00000376806 CORO1BQ9BR76 489 aa16.88■□□□□ 0.29
HLA-A-202ENST00000376806 SIKE1Q9BRV8 207 aa16.88■□□□□ 0.29
HLA-A-202ENST00000376806 WWP1Q9H0M0 922 aa16.88■□□□□ 0.29
HLA-A-202ENST00000376806 CPSF2Q9P2I0 782 aaKnown RBP16.88■□□□□ 0.29
HLA-A-202ENST00000376806 RUVBL2Q9Y230 463 aaKnown RBP16.88■□□□□ 0.29
HLA-A-202ENST00000376806 LZTS1Q9Y250 596 aa16.88■□□□□ 0.29
HLA-A-202ENST00000376806 RAI2Q9Y5P3 530 aa16.88■□□□□ 0.29
HLA-A-202ENST00000376806 HIDE1A8MVS5 230 aa16.88■□□□□ 0.29
HLA-A-202ENST00000376806 CCL16O15467 120 aa16.88■□□□□ 0.29
HLA-A-202ENST00000376806 H2AFYO75367 372 aaKnown RBP16.88■□□□□ 0.29
HLA-A-202ENST00000376806 KLHL2O95198 593 aa16.88■□□□□ 0.29
HLA-A-202ENST00000376806 GOT2P00505 430 aaKnown RBP16.88■□□□□ 0.29
HLA-A-202ENST00000376806 PRLP01236 227 aa16.88■□□□□ 0.29
HLA-A-202ENST00000376806 SBK3P0C264 359 aa16.88■□□□□ 0.29
HLA-A-202ENST00000376806 ARRB2P32121 409 aa16.88■□□□□ 0.29
HLA-A-202ENST00000376806 GLRBP48167 497 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms