RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 NCKIPSDQ9NZQ3 722 aa20.34■□□□□ 0.85
VSX1-202ENST00000376709 CAMSAP3Q9P1Y5 1249 aaPredicted RBP20.34■□□□□ 0.85
VSX1-202ENST00000376709 KCTD3Q9Y597 815 aa20.34■□□□□ 0.85
VSX1-202ENST00000376709 GJB5O95377 273 aa20.34■□□□□ 0.85
VSX1-202ENST00000376709 PSMG1O95456 288 aa20.34■□□□□ 0.85
VSX1-202ENST00000376709 FGF1P05230 155 aa20.34■□□□□ 0.85
VSX1-202ENST00000376709 SERPINF2P08697 491 aa20.34■□□□□ 0.85
VSX1-202ENST00000376709 TFEBP19484 476 aa20.34■□□□□ 0.85
VSX1-202ENST00000376709 SLC25A3Q00325 362 aa20.34■□□□□ 0.85
VSX1-202ENST00000376709 GALNT3Q14435 633 aa20.34■□□□□ 0.85
VSX1-202ENST00000376709 HECTD3Q5T447 861 aa20.34■□□□□ 0.85
VSX1-202ENST00000376709 AGAP9Q5VTM2 703 aa20.34■□□□□ 0.85
VSX1-202ENST00000376709 KLC3Q6P597 504 aa20.34■□□□□ 0.85
VSX1-202ENST00000376709 FAM43BQ6ZT52 329 aaPredicted RBP20.34■□□□□ 0.85
VSX1-202ENST00000376709 NET1Q7Z628 596 aaPredicted RBP20.34■□□□□ 0.85
VSX1-202ENST00000376709 SCG3Q8WXD2 468 aaKnown RBP20.34■□□□□ 0.85
VSX1-202ENST00000376709 VN1R3Q9BXE9 311 aa20.34■□□□□ 0.85
VSX1-202ENST00000376709 IGSF5Q9NSI5 407 aa20.34■□□□□ 0.85
VSX1-202ENST00000376709 STOML1Q9UBI4 398 aa20.34■□□□□ 0.85
VSX1-202ENST00000376709 ZDHHC2Q9UIJ5 367 aa20.34■□□□□ 0.85
VSX1-202ENST00000376709 OR51F1A6NGY5 319 aa20.33■□□□□ 0.85
VSX1-202ENST00000376709 C5orf22Q49AR2 442 aa20.33■□□□□ 0.85
VSX1-202ENST00000376709 HECTD2Q5U5R9 776 aa20.33■□□□□ 0.85
VSX1-202ENST00000376709 MICAL3Q7RTP6 2002 aa20.33■□□□□ 0.85
VSX1-202ENST00000376709 GALNT7Q86SF2 657 aa20.33■□□□□ 0.85
VSX1-202ENST00000376709 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP20.33■□□□□ 0.85
VSX1-202ENST00000376709 OR7D4Q8NG98 312 aa20.33■□□□□ 0.85
VSX1-202ENST00000376709 CEP295NLQ96MC4 621 aa20.33■□□□□ 0.85
VSX1-202ENST00000376709 SPON2Q9BUD6 331 aa20.33■□□□□ 0.85
VSX1-202ENST00000376709 NUF2Q9BZD4 464 aa20.33■□□□□ 0.85
VSX1-202ENST00000376709 POMKQ9H5K3 350 aa20.33■□□□□ 0.85
VSX1-202ENST00000376709 WDR55Q9H6Y2 383 aaPredicted RBP20.33■□□□□ 0.85
VSX1-202ENST00000376709 ARL5AQ9Y689 179 aa20.33■□□□□ 0.85
VSX1-202ENST00000376709 CHD5Q8TDI0 1954 aa20.33■□□□□ 0.84
VSX1-202ENST00000376709 LOC100653049A0A140TA62 436 aa20.32■□□□□ 0.84
VSX1-202ENST00000376709 ZNF840PA6NDX5 716 aa20.32■□□□□ 0.84
VSX1-202ENST00000376709 SLCO1B7G3V0H7 640 aa20.32■□□□□ 0.84
VSX1-202ENST00000376709 COCHO43405 550 aa20.32■□□□□ 0.84
VSX1-202ENST00000376709 ZBTB14O43829 449 aa20.32■□□□□ 0.84
VSX1-202ENST00000376709 KRT34O76011 436 aa20.32■□□□□ 0.84
VSX1-202ENST00000376709 LTA4HP09960 611 aaKnown RBP20.32■□□□□ 0.84
VSX1-202ENST00000376709 CCDC166P0CW27 439 aa20.32■□□□□ 0.84
VSX1-202ENST00000376709 ATP5F1P24539 256 aaPredicted RBP20.32■□□□□ 0.84
VSX1-202ENST00000376709 CDH4P55283 916 aa20.32■□□□□ 0.84
VSX1-202ENST00000376709 RPS24P62847 133 aaKnown RBP20.32■□□□□ 0.84
VSX1-202ENST00000376709 LAMB3Q13751 1172 aa20.32■□□□□ 0.84
VSX1-202ENST00000376709 TRMT5Q32P41 509 aaKnown RBP20.32■□□□□ 0.84
VSX1-202ENST00000376709 LMNTD2Q8IXW0 634 aa20.32■□□□□ 0.84
VSX1-202ENST00000376709 TXNDC5Q8NBS9 432 aaKnown RBP20.32■□□□□ 0.84
VSX1-202ENST00000376709 PDCD6IPQ8WUM4 868 aaKnown RBP20.32■□□□□ 0.84
VSX1-202ENST00000376709 SUDS3Q9H7L9 328 aaPredicted RBP20.32■□□□□ 0.84
VSX1-202ENST00000376709 VTI1BQ9UEU0 232 aa20.32■□□□□ 0.84
VSX1-202ENST00000376709 SLC7A8Q9UHI5 535 aa20.32■□□□□ 0.84
VSX1-202ENST00000376709 VWA7Q9Y334 891 aa20.32■□□□□ 0.84
VSX1-202ENST00000376709 BUD23O43709 281 aaKnown RBP20.32■□□□□ 0.84
VSX1-202ENST00000376709 EPOP01588 193 aa20.32■□□□□ 0.84
VSX1-202ENST00000376709 HOXD9P28356 352 aaPredicted RBP20.32■□□□□ 0.84
VSX1-202ENST00000376709 EPHA3P29320 983 aa20.32■□□□□ 0.84
VSX1-202ENST00000376709 C1orf146Q5VVC0 180 aa20.32■□□□□ 0.84
VSX1-202ENST00000376709 ACAD11Q709F0 780 aa20.32■□□□□ 0.84
VSX1-202ENST00000376709 PIWIL4Q7Z3Z4 852 aaKnown RBP20.32■□□□□ 0.84
VSX1-202ENST00000376709 LSMEM2Q8N112 164 aa20.32■□□□□ 0.84
VSX1-202ENST00000376709 CFAP61Q8NHU2 1237 aa20.32■□□□□ 0.84
VSX1-202ENST00000376709 OVCA2Q8WZ82 227 aa20.32■□□□□ 0.84
VSX1-202ENST00000376709 TBATAQ96M53 351 aa20.32■□□□□ 0.84
VSX1-202ENST00000376709 CINPQ9BW66 212 aaPredicted RBP20.32■□□□□ 0.84
VSX1-202ENST00000376709 CWH43Q9H720 699 aa20.32■□□□□ 0.84
VSX1-202ENST00000376709 MARCH4Q9P2E8 410 aaPredicted RBP20.32■□□□□ 0.84
VSX1-202ENST00000376709 BACE2Q9Y5Z0 518 aa20.32■□□□□ 0.84
VSX1-202ENST00000376709 ACTL7AQ9Y615 435 aa20.32■□□□□ 0.84
VSX1-202ENST00000376709 LAMA2P24043 3122 aaKnown RBP20.32■□□□□ 0.84
VSX1-202ENST00000376709 F8W8V4 182 aa20.31■□□□□ 0.84
VSX1-202ENST00000376709 TAF11Q15544 211 aa20.31■□□□□ 0.84
VSX1-202ENST00000376709 TAF12Q16514 161 aa20.31■□□□□ 0.84
VSX1-202ENST00000376709 TECRLQ5HYJ1 363 aa20.31■□□□□ 0.84
VSX1-202ENST00000376709 RIPOR1Q6ZS17 1223 aa20.31■□□□□ 0.84
VSX1-202ENST00000376709 TRIM67Q6ZTA4 783 aa20.31■□□□□ 0.84
VSX1-202ENST00000376709 OR52K2Q8NGK3 314 aa20.31■□□□□ 0.84
VSX1-202ENST00000376709 DTX3LQ8TDB6 740 aa20.31■□□□□ 0.84
VSX1-202ENST00000376709 DIS3LQ8TF46 1054 aaKnown RBP20.31■□□□□ 0.84
VSX1-202ENST00000376709 UBA2Q9UBT2 640 aaPredicted RBP20.31■□□□□ 0.84
VSX1-202ENST00000376709 SEPT3Q9UH03 358 aa20.31■□□□□ 0.84
VSX1-202ENST00000376709 CRYL1Q9Y2S2 319 aa20.31■□□□□ 0.84
VSX1-202ENST00000376709 NEMP2A6NFY4 417 aa20.31■□□□□ 0.84
VSX1-202ENST00000376709 NPHS1O60500 1241 aa20.31■□□□□ 0.84
VSX1-202ENST00000376709 GLP2RO95838 553 aa20.31■□□□□ 0.84
VSX1-202ENST00000376709 S1PR4O95977 384 aa20.31■□□□□ 0.84
VSX1-202ENST00000376709 PIRTP0C851 137 aa20.31■□□□□ 0.84
VSX1-202ENST00000376709 GLDCP23378 1020 aa20.31■□□□□ 0.84
VSX1-202ENST00000376709 OXCT1P55809 520 aa20.31■□□□□ 0.84
VSX1-202ENST00000376709 KLF10Q13118 480 aa20.31■□□□□ 0.84
VSX1-202ENST00000376709 BTG3Q14201 252 aaPredicted RBP20.31■□□□□ 0.84
VSX1-202ENST00000376709 NAA25Q14CX7 972 aa20.31■□□□□ 0.84
VSX1-202ENST00000376709 TMCO2Q7Z6W1 182 aaPredicted RBP20.31■□□□□ 0.84
VSX1-202ENST00000376709 PLD4Q96BZ4 506 aa20.31■□□□□ 0.84
VSX1-202ENST00000376709 DNAJC1Q96KC8 554 aaKnown RBP20.31■□□□□ 0.84
VSX1-202ENST00000376709 ANKRD27Q96NW4 1050 aa20.31■□□□□ 0.84
VSX1-202ENST00000376709 MGME1Q9BQP7 344 aa20.31■□□□□ 0.84
VSX1-202ENST00000376709 RETREG1Q9H6L5 497 aa20.31■□□□□ 0.84
VSX1-202ENST00000376709 TRPM5Q9NZQ8 1165 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms