RNA–Protein interactions for RNA: ENST00000375618.8

C11orf88-202, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C11orf88, Length 712 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-202ENST00000375618 CACNA1EQ15878 2313 aa16.09■□□□□ 0.17
C11orf88-202ENST00000375618 TMEM131Q92545 1883 aa16.09■□□□□ 0.17
C11orf88-202ENST00000375618 A0A0U1RQS6 177 aa16.08■□□□□ 0.16
C11orf88-202ENST00000375618 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.08■□□□□ 0.16
C11orf88-202ENST00000375618 POM121BA6NF01 834 aa16.08■□□□□ 0.16
C11orf88-202ENST00000375618 A8MX80 341 aa16.08■□□□□ 0.16
C11orf88-202ENST00000375618 NEMP1O14524 444 aa16.08■□□□□ 0.16
C11orf88-202ENST00000375618 FZD6O60353 706 aa16.08■□□□□ 0.16
C11orf88-202ENST00000375618 SOCS5O75159 536 aa16.08■□□□□ 0.16
C11orf88-202ENST00000375618 SYPP08247 313 aa16.08■□□□□ 0.16
C11orf88-202ENST00000375618 CCDC175P0C221 793 aa16.08■□□□□ 0.16
C11orf88-202ENST00000375618 CD59P13987 128 aa16.08■□□□□ 0.16
C11orf88-202ENST00000375618 GM2AP17900 193 aa16.08■□□□□ 0.16
C11orf88-202ENST00000375618 HNRNPA2B1P22626 353 aaKnown RBP16.08■□□□□ 0.16
C11orf88-202ENST00000375618 NR2C2P49116 596 aa16.08■□□□□ 0.16
C11orf88-202ENST00000375618 NXPH1P58417 271 aa16.08■□□□□ 0.16
C11orf88-202ENST00000375618 COPS2P61201 443 aa16.08■□□□□ 0.16
C11orf88-202ENST00000375618 ITKQ08881 620 aa16.08■□□□□ 0.16
C11orf88-202ENST00000375618 WASHC5Q12768 1159 aa16.08■□□□□ 0.16
C11orf88-202ENST00000375618 SHBQ15464 509 aa16.08■□□□□ 0.16
C11orf88-202ENST00000375618 TEAD4Q15561 434 aa16.08■□□□□ 0.16
C11orf88-202ENST00000375618 ZNF662Q6ZS27 426 aa16.08■□□□□ 0.16
C11orf88-202ENST00000375618 ZC3H18Q86VM9 953 aaKnown RBP16.08■□□□□ 0.16
C11orf88-202ENST00000375618 SYCE1Q8N0S2 351 aa16.08■□□□□ 0.16
C11orf88-202ENST00000375618 TXLNBQ8N3L3 684 aa16.08■□□□□ 0.16
C11orf88-202ENST00000375618 SPOCK2Q92563 424 aa16.08■□□□□ 0.16
C11orf88-202ENST00000375618 TSGA10Q9BZW7 698 aa16.08■□□□□ 0.16
C11orf88-202ENST00000375618 ZDHHC5Q9C0B5 715 aa16.08■□□□□ 0.16
C11orf88-202ENST00000375618 POLR1EQ9GZS1 481 aaKnown RBP16.08■□□□□ 0.16
C11orf88-202ENST00000375618 GAREM1Q9H706 876 aa16.08■□□□□ 0.16
C11orf88-202ENST00000375618 DNAAF2Q9NVR5 837 aaKnown RBP16.08■□□□□ 0.16
C11orf88-202ENST00000375618 SEPT10Q9P0V9 454 aa16.08■□□□□ 0.16
C11orf88-202ENST00000375618 TTLL3Q9Y4R7 772 aa16.08■□□□□ 0.16
C11orf88-202ENST00000375618 PCDHB9Q9Y5E1 797 aa16.08■□□□□ 0.16
C11orf88-202ENST00000375618 RAI2Q9Y5P3 530 aa16.08■□□□□ 0.16
C11orf88-202ENST00000375618 TP53BP1Q12888 1972 aaPredicted RBP16.07■□□□□ 0.16
C11orf88-202ENST00000375618 LRRK1Q38SD2 2015 aa16.07■□□□□ 0.16
C11orf88-202ENST00000375618 TRPM6Q9BX84 2022 aa16.07■□□□□ 0.16
C11orf88-202ENST00000375618 DNAH14Q0VDD8 3507 aa16.07■□□□□ 0.16
C11orf88-202ENST00000375618 TCRBV7S2A1N4TA0A589 114 aa16.07■□□□□ 0.16
C11orf88-202ENST00000375618 TLR4O00206 839 aa16.07■□□□□ 0.16
C11orf88-202ENST00000375618 PPP1R12AO14974 1030 aaPredicted RBP16.07■□□□□ 0.16
C11orf88-202ENST00000375618 KRT86O43790 486 aa16.07■□□□□ 0.16
C11orf88-202ENST00000375618 PGLSO95336 258 aa16.07■□□□□ 0.16
C11orf88-202ENST00000375618 CPP00450 1065 aa16.07■□□□□ 0.16
C11orf88-202ENST00000375618 PRLP01236 227 aa16.07■□□□□ 0.16
C11orf88-202ENST00000375618 XPAP23025 273 aaPredicted RBP16.07■□□□□ 0.16
C11orf88-202ENST00000375618 PTPN3P26045 913 aa16.07■□□□□ 0.16
C11orf88-202ENST00000375618 NUDT1P36639 197 aa16.07■□□□□ 0.16
C11orf88-202ENST00000375618 SUOXP51687 545 aa16.07■□□□□ 0.16
C11orf88-202ENST00000375618 FAM193AP78312 1265 aa16.07■□□□□ 0.16
C11orf88-202ENST00000375618 SKOR1P84550 965 aa16.07■□□□□ 0.16
C11orf88-202ENST00000375618 PUM1Q14671 1186 aaKnown RBP eCLIP16.07■□□□□ 0.16
C11orf88-202ENST00000375618 RALGPS1Q5JS13 557 aa16.07■□□□□ 0.16
C11orf88-202ENST00000375618 TPRG1LQ5T0D9 272 aa16.07■□□□□ 0.16
C11orf88-202ENST00000375618 CFAP58Q5T655 872 aa16.07■□□□□ 0.16
C11orf88-202ENST00000375618 DPPA4Q7L190 304 aa16.07■□□□□ 0.16
C11orf88-202ENST00000375618 ADAT2Q7Z6V5 191 aaKnown RBP16.07■□□□□ 0.16
C11orf88-202ENST00000375618 ABI3BPQ7Z7G0 1075 aa16.07■□□□□ 0.16
C11orf88-202ENST00000375618 MFSD2AQ8NA29 543 aa16.07■□□□□ 0.16
C11orf88-202ENST00000375618 TP53I13Q8NBR0 393 aaPredicted RBP16.07■□□□□ 0.16
C11orf88-202ENST00000375618 OR13H1Q8NG92 308 aa16.07■□□□□ 0.16
C11orf88-202ENST00000375618 ACTL9Q8TC94 416 aa16.07■□□□□ 0.16
C11orf88-202ENST00000375618 PDCD6IPQ8WUM4 868 aaKnown RBP16.07■□□□□ 0.16
C11orf88-202ENST00000375618 PIH1D2Q8WWB5 315 aa16.07■□□□□ 0.16
C11orf88-202ENST00000375618 P3H4Q92791 437 aa16.07■□□□□ 0.16
C11orf88-202ENST00000375618 CENPTQ96BT3 561 aa16.07■□□□□ 0.16
C11orf88-202ENST00000375618 PDLIM2Q96JY6 352 aa16.07■□□□□ 0.16
C11orf88-202ENST00000375618 QKIQ96PU8 341 aaKnown RBP eCLIP16.07■□□□□ 0.16
C11orf88-202ENST00000375618 RTKNQ9BST9 563 aa16.07■□□□□ 0.16
C11orf88-202ENST00000375618 MBNL1Q9NR56 388 aaKnown RBP16.07■□□□□ 0.16
C11orf88-202ENST00000375618 B4GALT6Q9UBX8 382 aa16.07■□□□□ 0.16
C11orf88-202ENST00000375618 AMACRQ9UHK6 382 aa16.07■□□□□ 0.16
C11orf88-202ENST00000375618 PPP2R2CQ9Y2T4 447 aa16.07■□□□□ 0.16
C11orf88-202ENST00000375618 MIF4GDA9UHW6 222 aaKnown RBP16.06■□□□□ 0.16
C11orf88-202ENST00000375618 C6P13671 934 aa16.06■□□□□ 0.16
C11orf88-202ENST00000375618 CTPS1P17812 591 aa16.06■□□□□ 0.16
C11orf88-202ENST00000375618 LHCGRP22888 699 aa16.06■□□□□ 0.16
C11orf88-202ENST00000375618 AKT2P31751 481 aa16.06■□□□□ 0.16
C11orf88-202ENST00000375618 CD68P34810 354 aaPredicted RBP16.06■□□□□ 0.16
C11orf88-202ENST00000375618 IGFALSP35858 605 aa16.06■□□□□ 0.16
C11orf88-202ENST00000375618 LIG3P49916 1009 aa16.06■□□□□ 0.16
C11orf88-202ENST00000375618 ATXN3P54252 364 aaPredicted RBP16.06■□□□□ 0.16
C11orf88-202ENST00000375618 C21orf59P57076 290 aa16.06■□□□□ 0.16
C11orf88-202ENST00000375618 IL9RQ01113 521 aa16.06■□□□□ 0.16
C11orf88-202ENST00000375618 OTUD4Q01804 1114 aaKnown RBP16.06■□□□□ 0.16
C11orf88-202ENST00000375618 ELP6Q0PNE2 266 aa16.06■□□□□ 0.16
C11orf88-202ENST00000375618 STAT4Q14765 748 aa16.06■□□□□ 0.16
C11orf88-202ENST00000375618 NOMO1Q15155 1222 aa16.06■□□□□ 0.16
C11orf88-202ENST00000375618 ZNF423Q2M1K9 1284 aa16.06■□□□□ 0.16
C11orf88-202ENST00000375618 SLC22A18ASQ8N1D0 253 aa16.06■□□□□ 0.16
C11orf88-202ENST00000375618 CXorf40AQ8TE69 158 aa16.06■□□□□ 0.16
C11orf88-202ENST00000375618 TFB1MQ8WVM0 346 aaKnown RBP16.06■□□□□ 0.16
C11orf88-202ENST00000375618 ASB12Q8WXK4 309 aa16.06■□□□□ 0.16
C11orf88-202ENST00000375618 TADA1Q96BN2 335 aa16.06■□□□□ 0.16
C11orf88-202ENST00000375618 AGAP3Q96P47 875 aa16.06■□□□□ 0.16
C11orf88-202ENST00000375618 LENG8Q96PV6 779 aaPredicted RBP16.06■□□□□ 0.16
C11orf88-202ENST00000375618 TDRD1Q9BXT4 1180 aaKnown RBP16.06■□□□□ 0.16
C11orf88-202ENST00000375618 BRD8Q9H0E9 1235 aa16.06■□□□□ 0.16
C11orf88-202ENST00000375618 GPR27Q9NS67 375 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms