RNA–Protein interactions for RNA: ENST00000374541.3

PTPN3-202, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPN3, Length 6,703 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-202ENST00000374541 ZNF846Q147U1 533 aa6.34□□□□□ -1.4
PTPN3-202ENST00000374541 INSCQ1MX18 579 aa6.34□□□□□ -1.4
PTPN3-202ENST00000374541 SPANXN3Q5MJ09 141 aa6.34□□□□□ -1.4
PTPN3-202ENST00000374541 DENND5AQ6IQ26 1287 aa6.34□□□□□ -1.4
PTPN3-202ENST00000374541 KYAT3Q6YP21 454 aaKnown RBP6.34□□□□□ -1.4
PTPN3-202ENST00000374541 USP53Q70EK8 1073 aa6.34□□□□□ -1.4
PTPN3-202ENST00000374541 NET1Q7Z628 596 aaPredicted RBP6.34□□□□□ -1.4
PTPN3-202ENST00000374541 C11orf96Q7Z7L8 435 aa6.34□□□□□ -1.4
PTPN3-202ENST00000374541 VSIG10LQ86VR7 867 aa6.34□□□□□ -1.4
PTPN3-202ENST00000374541 OR7A2PQ8NGA2 310 aa6.34□□□□□ -1.4
PTPN3-202ENST00000374541 TMC2Q8TDI7 906 aa6.34□□□□□ -1.4
PTPN3-202ENST00000374541 PROX1Q92786 737 aa6.34□□□□□ -1.4
PTPN3-202ENST00000374541 FOXJ1Q92949 421 aa6.34□□□□□ -1.4
PTPN3-202ENST00000374541 MRPL38Q96DV4 380 aaKnown RBP6.34□□□□□ -1.4
PTPN3-202ENST00000374541 CPNE1Q99829 537 aa6.34□□□□□ -1.4
PTPN3-202ENST00000374541 CHID1Q9BWS9 393 aa6.34□□□□□ -1.4
PTPN3-202ENST00000374541 CYP3A43Q9HB55 503 aa6.34□□□□□ -1.4
PTPN3-202ENST00000374541 TXNRD2Q9NNW7 524 aa6.34□□□□□ -1.4
PTPN3-202ENST00000374541 CYLDQ9NQC7 956 aa6.34□□□□□ -1.4
PTPN3-202ENST00000374541 AGPAT5Q9NUQ2 364 aa6.34□□□□□ -1.4
PTPN3-202ENST00000374541 CYP8B1Q9UNU6 501 aa6.34□□□□□ -1.4
PTPN3-202ENST00000374541 CRYL1Q9Y2S2 319 aa6.34□□□□□ -1.4
PTPN3-202ENST00000374541 PP2D1A8MPX8 630 aa6.33□□□□□ -1.4
PTPN3-202ENST00000374541 PRR5-ARHGAP8B1AHC4 643 aa6.33□□□□□ -1.4
PTPN3-202ENST00000374541 PITPNM1O00562 1244 aa6.33□□□□□ -1.4
PTPN3-202ENST00000374541 MSH4O15457 936 aa6.33□□□□□ -1.4
PTPN3-202ENST00000374541 PROSCO94903 275 aa6.33□□□□□ -1.4
PTPN3-202ENST00000374541 CPSF4O95639 269 aaKnown RBP6.33□□□□□ -1.4
PTPN3-202ENST00000374541 NOVA1P51513 510 aaKnown RBP6.33□□□□□ -1.4
PTPN3-202ENST00000374541 FAM187BQ17R55 369 aa6.33□□□□□ -1.4
PTPN3-202ENST00000374541 ZSWIM7Q19AV6 140 aa6.33□□□□□ -1.4
PTPN3-202ENST00000374541 LGI2Q8N0V4 545 aa6.33□□□□□ -1.4
PTPN3-202ENST00000374541 SFRP1Q8N474 314 aa6.33□□□□□ -1.4
PTPN3-202ENST00000374541 PIK3C3Q8NEB9 887 aa6.33□□□□□ -1.4
PTPN3-202ENST00000374541 SPATA5L1Q9BVQ7 753 aa6.33□□□□□ -1.4
PTPN3-202ENST00000374541 REEP1Q9H902 201 aa6.33□□□□□ -1.4
PTPN3-202ENST00000374541 ACTR8Q9H981 624 aa6.33□□□□□ -1.4
PTPN3-202ENST00000374541 CCDC59Q9P031 241 aaKnown RBP6.33□□□□□ -1.4
PTPN3-202ENST00000374541 ANAPC2Q9UJX6 822 aa6.33□□□□□ -1.4
PTPN3-202ENST00000374541 RPS6KA6Q9UK32 745 aa6.33□□□□□ -1.4
PTPN3-202ENST00000374541 NPHP3-ACAD11A0A0J9YXS1 232 aa6.33□□□□□ -1.4
PTPN3-202ENST00000374541 A0A1W2PRU2 124 aa6.33□□□□□ -1.4
PTPN3-202ENST00000374541 FCHO1O14526 889 aa6.33□□□□□ -1.4
PTPN3-202ENST00000374541 MEIS2O14770 477 aa6.33□□□□□ -1.4
PTPN3-202ENST00000374541 HAT1O14929 419 aa6.33□□□□□ -1.4
PTPN3-202ENST00000374541 TBL1XO60907 577 aa6.33□□□□□ -1.4
PTPN3-202ENST00000374541 S100A6P06703 90 aa6.33□□□□□ -1.4
PTPN3-202ENST00000374541 PRKAR1AP10644 381 aa6.33□□□□□ -1.4
PTPN3-202ENST00000374541 FAUP35544 74 aaKnown RBP6.33□□□□□ -1.4
PTPN3-202ENST00000374541 POLR2LP62875 67 aaKnown RBP6.33□□□□□ -1.4
PTPN3-202ENST00000374541 CDK16Q00536 496 aa6.33□□□□□ -1.4
PTPN3-202ENST00000374541 ROR2Q01974 943 aaKnown RBP6.33□□□□□ -1.4
PTPN3-202ENST00000374541 CDH17Q12864 832 aa6.33□□□□□ -1.4
PTPN3-202ENST00000374541 BNIP2Q12982 314 aa6.33□□□□□ -1.4
PTPN3-202ENST00000374541 NR6A1Q15406 480 aa6.33□□□□□ -1.4
PTPN3-202ENST00000374541 LYSMD4Q5XG99 296 aa6.33□□□□□ -1.4
PTPN3-202ENST00000374541 MARK2Q7KZI7 788 aaKnown RBP6.33□□□□□ -1.4
PTPN3-202ENST00000374541 TMCO2Q7Z6W1 182 aaPredicted RBP6.33□□□□□ -1.4
PTPN3-202ENST00000374541 STX12Q86Y82 276 aa6.33□□□□□ -1.4
PTPN3-202ENST00000374541 ZDHHC17Q8IUH5 632 aa6.33□□□□□ -1.4
PTPN3-202ENST00000374541 IZUMO1Q8IYV9 350 aa6.33□□□□□ -1.4
PTPN3-202ENST00000374541 TCAIMQ8N3R3 496 aa6.33□□□□□ -1.4
PTPN3-202ENST00000374541 SPPL2AQ8TCT8 520 aa6.33□□□□□ -1.4
PTPN3-202ENST00000374541 SGF29Q96ES7 293 aa6.33□□□□□ -1.4
PTPN3-202ENST00000374541 TEKT5Q96M29 485 aa6.33□□□□□ -1.4
PTPN3-202ENST00000374541 TOX2Q96NM4 488 aa6.33□□□□□ -1.4
PTPN3-202ENST00000374541 SLC38A3Q99624 504 aa6.33□□□□□ -1.4
PTPN3-202ENST00000374541 CHCHD6Q9BRQ6 235 aa6.33□□□□□ -1.4
PTPN3-202ENST00000374541 BTBD1Q9H0C5 482 aa6.33□□□□□ -1.4
PTPN3-202ENST00000374541 POLR1BQ9H9Y6 1135 aa6.33□□□□□ -1.4
PTPN3-202ENST00000374541 FAM86C1Q9NVL1 165 aa6.33□□□□□ -1.4
PTPN3-202ENST00000374541 ZNHIT2Q9UHR6 403 aa6.33□□□□□ -1.4
PTPN3-202ENST00000374541 RAPGEFL1Q9UHV5 662 aa6.33□□□□□ -1.4
PTPN3-202ENST00000374541 TRHDEQ9UKU6 1024 aa6.33□□□□□ -1.4
PTPN3-202ENST00000374541 USP20Q9Y2K6 914 aa6.33□□□□□ -1.4
PTPN3-202ENST00000374541 TNPO3Q9Y5L0 923 aaKnown RBP6.33□□□□□ -1.4
PTPN3-202ENST00000374541 ACTL7BQ9Y614 415 aa6.33□□□□□ -1.4
PTPN3-202ENST00000374541 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.33□□□□□ -1.4
PTPN3-202ENST00000374541 CHP2O43745 196 aa6.33□□□□□ -1.4
PTPN3-202ENST00000374541 HS6ST1O60243 411 aa6.33□□□□□ -1.4
PTPN3-202ENST00000374541 PLA2G6O60733 806 aa6.33□□□□□ -1.4
PTPN3-202ENST00000374541 TCF4P15884 667 aa6.33□□□□□ -1.4
PTPN3-202ENST00000374541 CYP11B2P19099 503 aa6.33□□□□□ -1.4
PTPN3-202ENST00000374541 MAT2AP31153 395 aaKnown RBP6.33□□□□□ -1.4
PTPN3-202ENST00000374541 LMAN2Q12907 356 aa6.33□□□□□ -1.4
PTPN3-202ENST00000374541 SMAD4Q13485 552 aaKnown RBP6.33□□□□□ -1.4
PTPN3-202ENST00000374541 SMAD1Q15797 465 aaKnown RBP6.33□□□□□ -1.4
PTPN3-202ENST00000374541 VITQ6UXI7 678 aa6.33□□□□□ -1.4
PTPN3-202ENST00000374541 STRA8Q7Z7C7 330 aa6.33□□□□□ -1.4
PTPN3-202ENST00000374541 ITFG1Q8TB96 612 aa6.33□□□□□ -1.4
PTPN3-202ENST00000374541 UBA3Q8TBC4 463 aa6.33□□□□□ -1.4
PTPN3-202ENST00000374541 UBE2E3Q969T4 207 aa6.33□□□□□ -1.4
PTPN3-202ENST00000374541 P2RY13Q9BPV8 354 aa6.33□□□□□ -1.4
PTPN3-202ENST00000374541 PHF11Q9UIL8 331 aa6.33□□□□□ -1.4
PTPN3-202ENST00000374541 TBC1D30Q9Y2I9 924 aa6.33□□□□□ -1.4
PTPN3-202ENST00000374541 IRAK3Q9Y616 596 aa6.33□□□□□ -1.4
PTPN3-202ENST00000374541 PTPRZ1P23471 2315 aaPredicted RBP6.33□□□□□ -1.4
PTPN3-202ENST00000374541 A0A087X1B8 175 aa6.33□□□□□ -1.4
PTPN3-202ENST00000374541 ERN1O75460 977 aaKnown RBP6.33□□□□□ -1.4
PTPN3-202ENST00000374541 GSTM5P46439 218 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms