RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 KCNK13Q9HB14 408 aa25.14■■□□□ 1.61
CTSA-203ENST00000372459 KCTD3Q9Y597 815 aa25.14■■□□□ 1.61
CTSA-203ENST00000372459 ARL5AQ9Y689 179 aa25.14■■□□□ 1.61
CTSA-203ENST00000372459 PHGDHO43175 533 aaKnown RBP25.13■■□□□ 1.61
CTSA-203ENST00000372459 SLC35E2BP0CK96 405 aa25.13■■□□□ 1.61
CTSA-203ENST00000372459 GJA1P17302 382 aa25.13■■□□□ 1.61
CTSA-203ENST00000372459 GRK2P25098 689 aa25.13■■□□□ 1.61
CTSA-203ENST00000372459 AVPR1AP37288 418 aa25.13■■□□□ 1.61
CTSA-203ENST00000372459 CSKP41240 450 aa25.13■■□□□ 1.61
CTSA-203ENST00000372459 ARSDP51689 593 aa25.13■■□□□ 1.61
CTSA-203ENST00000372459 NSUN2Q08J23 767 aaKnown RBP eCLIP25.13■■□□□ 1.61
CTSA-203ENST00000372459 RNF135Q8IUD6 432 aa25.13■■□□□ 1.61
CTSA-203ENST00000372459 CILP2Q8IUL8 1156 aa25.13■■□□□ 1.61
CTSA-203ENST00000372459 MFSD6LQ8IWD5 586 aa25.13■■□□□ 1.61
CTSA-203ENST00000372459 DCAF4L2Q8NA75 395 aa25.13■■□□□ 1.61
CTSA-203ENST00000372459 STYXQ8WUJ0 223 aa25.13■■□□□ 1.61
CTSA-203ENST00000372459 C1QTNF1Q9BXJ1 281 aa25.13■■□□□ 1.61
CTSA-203ENST00000372459 TMEM120AQ9BXJ8 343 aa25.13■■□□□ 1.61
CTSA-203ENST00000372459 CD248Q9HCU0 757 aa25.13■■□□□ 1.61
CTSA-203ENST00000372459 ACOT9Q9Y305 439 aa25.13■■□□□ 1.61
CTSA-203ENST00000372459 CLCN4P51793 760 aa25.13■■□□□ 1.61
CTSA-203ENST00000372459 SLC12A2P55011 1212 aa25.13■■□□□ 1.61
CTSA-203ENST00000372459 BBS7Q8IWZ6 715 aa25.13■■□□□ 1.61
CTSA-203ENST00000372459 TNS4Q8IZW8 715 aa25.13■■□□□ 1.61
CTSA-203ENST00000372459 SREK1Q8WXA9 508 aaKnown RBP25.13■■□□□ 1.61
CTSA-203ENST00000372459 RMDN1Q96DB5 314 aa25.13■■□□□ 1.61
CTSA-203ENST00000372459 NSMCE3Q96MG7 304 aa25.13■■□□□ 1.61
CTSA-203ENST00000372459 TASP1Q9H6P5 420 aa25.13■■□□□ 1.61
CTSA-203ENST00000372459 TLR9Q9NR96 1032 aa25.13■■□□□ 1.61
CTSA-203ENST00000372459 RWDD3Q9Y3V2 267 aa25.13■■□□□ 1.61
CTSA-203ENST00000372459 CRTAMO95727 393 aa25.12■■□□□ 1.61
CTSA-203ENST00000372459 RALBP11234 206 aa25.12■■□□□ 1.61
CTSA-203ENST00000372459 CLCN5P51795 746 aa25.12■■□□□ 1.61
CTSA-203ENST00000372459 MPPE1Q53F39 396 aa25.12■■□□□ 1.61
CTSA-203ENST00000372459 MPP7Q5T2T1 576 aa25.12■■□□□ 1.61
CTSA-203ENST00000372459 CNSTQ6PJW8 725 aa25.12■■□□□ 1.61
CTSA-203ENST00000372459 SPPL3Q8TCT6 385 aa25.12■■□□□ 1.61
CTSA-203ENST00000372459 WFDC5Q8TCV5 224 aa25.12■■□□□ 1.61
CTSA-203ENST00000372459 BHMTQ93088 406 aa25.12■■□□□ 1.61
CTSA-203ENST00000372459 SLC46A2Q9BY10 475 aa25.12■■□□□ 1.61
CTSA-203ENST00000372459 C20orf27Q9GZN8 174 aa25.12■■□□□ 1.61
CTSA-203ENST00000372459 ZNF395Q9H8N7 513 aaPredicted RBP25.12■■□□□ 1.61
CTSA-203ENST00000372459 VPS51Q9UID3 782 aa25.12■■□□□ 1.61
CTSA-203ENST00000372459 LEFTY2O00292 366 aa25.11■■□□□ 1.61
CTSA-203ENST00000372459 RPP40O75818 363 aaKnown RBP25.11■■□□□ 1.61
CTSA-203ENST00000372459 SLC1A6P48664 564 aa25.11■■□□□ 1.61
CTSA-203ENST00000372459 RTL10Q7L3V2 364 aa25.11■■□□□ 1.61
CTSA-203ENST00000372459 ARID3BQ8IVW6 561 aaPredicted RBP25.11■■□□□ 1.61
CTSA-203ENST00000372459 CEP97Q8IW35 865 aa25.11■■□□□ 1.61
CTSA-203ENST00000372459 ALG14Q96F25 216 aa25.11■■□□□ 1.61
CTSA-203ENST00000372459 DNAJC1Q96KC8 554 aaKnown RBP25.11■■□□□ 1.61
CTSA-203ENST00000372459 TBATAQ96M53 351 aa25.11■■□□□ 1.61
CTSA-203ENST00000372459 ECT2Q9H8V3 914 aa25.11■■□□□ 1.61
CTSA-203ENST00000372459 RAI2Q9Y5P3 530 aa25.11■■□□□ 1.61
CTSA-203ENST00000372459 ALPK3Q96L96 1907 aa25.11■■□□□ 1.61
CTSA-203ENST00000372459 NRG2O14511 850 aaPredicted RBP25.11■■□□□ 1.61
CTSA-203ENST00000372459 AURKAO14965 403 aa25.11■■□□□ 1.61
CTSA-203ENST00000372459 FGF19O95750 216 aa25.11■■□□□ 1.61
CTSA-203ENST00000372459 PIRTP0C851 137 aa25.11■■□□□ 1.61
CTSA-203ENST00000372459 NCALDP61601 193 aa25.11■■□□□ 1.61
CTSA-203ENST00000372459 ILF2Q12905 390 aaKnown RBP25.11■■□□□ 1.61
CTSA-203ENST00000372459 RDH11Q8TC12 318 aa25.11■■□□□ 1.61
CTSA-203ENST00000372459 OMDQ99983 421 aa25.11■■□□□ 1.61
CTSA-203ENST00000372459 C2orf49Q9BVC5 232 aaPredicted RBP25.11■■□□□ 1.61
CTSA-203ENST00000372459 ADGRE3Q9BY15 652 aa25.11■■□□□ 1.61
CTSA-203ENST00000372459 KCNK4Q9NYG8 393 aa25.11■■□□□ 1.61
CTSA-203ENST00000372459 RUVBL2Q9Y230 463 aaKnown RBP25.11■■□□□ 1.61
CTSA-203ENST00000372459 A0A087X1B8 175 aa25.1■■□□□ 1.61
CTSA-203ENST00000372459 G3V2L1 256 aa25.1■■□□□ 1.61
CTSA-203ENST00000372459 CCL22O00626 93 aa25.1■■□□□ 1.61
CTSA-203ENST00000372459 GLP2RO95838 553 aa25.1■■□□□ 1.61
CTSA-203ENST00000372459 PRLP01236 227 aa25.1■■□□□ 1.61
CTSA-203ENST00000372459 MYL2P10916 166 aa25.1■■□□□ 1.61
CTSA-203ENST00000372459 SLC8A1P32418 973 aa25.1■■□□□ 1.61
CTSA-203ENST00000372459 TAS2R39P59534 338 aa25.1■■□□□ 1.61
CTSA-203ENST00000372459 RHOAP61586 193 aa25.1■■□□□ 1.61
CTSA-203ENST00000372459 UBE3AQ05086 875 aa25.1■■□□□ 1.61
CTSA-203ENST00000372459 RIPK1Q13546 671 aa25.1■■□□□ 1.61
CTSA-203ENST00000372459 ZNF789Q5FWF6 425 aa25.1■■□□□ 1.61
CTSA-203ENST00000372459 SPDYAQ5MJ70 313 aa25.1■■□□□ 1.61
CTSA-203ENST00000372459 C7orf61Q8IZ16 206 aa25.1■■□□□ 1.61
CTSA-203ENST00000372459 MICAL1Q8TDZ2 1067 aa25.1■■□□□ 1.61
CTSA-203ENST00000372459 KCTD4Q8WVF5 259 aa25.1■■□□□ 1.61
CTSA-203ENST00000372459 DNMT3BQ9UBC3 853 aaKnown RBP25.1■■□□□ 1.61
CTSA-203ENST00000372459 LHX3Q9UBR4 397 aa25.1■■□□□ 1.61
CTSA-203ENST00000372459 ARHGAP26Q9UNA1 814 aa25.1■■□□□ 1.61
CTSA-203ENST00000372459 MTCL1Q9Y4B5 1905 aaKnown RBP25.1■■□□□ 1.61
CTSA-203ENST00000372459 GOT2P00505 430 aaKnown RBP25.09■■□□□ 1.61
CTSA-203ENST00000372459 SKIV2L2P42285 1042 aaKnown RBP25.09■■□□□ 1.61
CTSA-203ENST00000372459 ITGA9Q13797 1035 aa25.09■■□□□ 1.61
CTSA-203ENST00000372459 PREPLQ4J6C6 727 aaPredicted RBP25.09■■□□□ 1.61
CTSA-203ENST00000372459 RALGPS1Q5JS13 557 aa25.09■■□□□ 1.61
CTSA-203ENST00000372459 NCEH1Q6PIU2 408 aa25.09■■□□□ 1.61
CTSA-203ENST00000372459 LPCAT1Q8NF37 534 aa25.09■■□□□ 1.61
CTSA-203ENST00000372459 OR13C4Q8NGS5 318 aa25.09■■□□□ 1.61
CTSA-203ENST00000372459 PPP4R1Q8TF05 950 aa25.09■■□□□ 1.61
CTSA-203ENST00000372459 HCFC1R1Q9NWW0 138 aa25.09■■□□□ 1.61
CTSA-203ENST00000372459 CAMSAP3Q9P1Y5 1249 aaPredicted RBP25.09■■□□□ 1.61
CTSA-203ENST00000372459 HEY2Q9UBP5 337 aa25.09■■□□□ 1.61
CTSA-203ENST00000372459 ZFP69BQ9UJL9 534 aa25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms