RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 POFUT2Q9Y2G5 429 aa15.34■□□□□ 0.05
COL5A1-201ENST00000371817 PADI2Q9Y2J8 665 aa15.34■□□□□ 0.05
COL5A1-201ENST00000371817 HOXB8P17481 243 aaPredicted RBP15.33■□□□□ 0.05
COL5A1-201ENST00000371817 HSD3B2P26439 372 aa15.33■□□□□ 0.05
COL5A1-201ENST00000371817 MAGEA6P43360 314 aa15.33■□□□□ 0.05
COL5A1-201ENST00000371817 VWA5B1Q5TIE3 1220 aa15.33■□□□□ 0.05
COL5A1-201ENST00000371817 XKRXQ6PP77 449 aa15.33■□□□□ 0.05
COL5A1-201ENST00000371817 CCDC107Q8WV48 283 aa15.33■□□□□ 0.05
COL5A1-201ENST00000371817 BAP1Q92560 729 aa15.33■□□□□ 0.05
COL5A1-201ENST00000371817 SH2D3AQ9BRG2 576 aa15.33■□□□□ 0.05
COL5A1-201ENST00000371817 CDHR5Q9HBB8 845 aa15.33■□□□□ 0.05
COL5A1-201ENST00000371817 PREBQ9HCU5 417 aa15.33■□□□□ 0.05
COL5A1-201ENST00000371817 PCYOX1Q9UHG3 505 aa15.33■□□□□ 0.05
COL5A1-201ENST00000371817 CLCN2P51788 898 aa15.33■□□□□ 0.05
COL5A1-201ENST00000371817 SLC7A2P52569 658 aa15.33■□□□□ 0.05
COL5A1-201ENST00000371817 ACSM2AQ08AH3 577 aa15.33■□□□□ 0.05
COL5A1-201ENST00000371817 PLEKHG6Q3KR16 790 aa15.33■□□□□ 0.05
COL5A1-201ENST00000371817 ACSM2BQ68CK6 577 aa15.33■□□□□ 0.05
COL5A1-201ENST00000371817 QSOX2Q6ZRP7 698 aa15.33■□□□□ 0.05
COL5A1-201ENST00000371817 IGDCC4Q8TDY8 1250 aa15.33■□□□□ 0.05
COL5A1-201ENST00000371817 BARX2Q9UMQ3 279 aaPredicted RBP15.33■□□□□ 0.05
COL5A1-201ENST00000371817 RAP2CQ9Y3L5 183 aa15.33■□□□□ 0.05
COL5A1-201ENST00000371817 U3KQV3 271 aa15.33■□□□□ 0.05
COL5A1-201ENST00000371817 SPARCP09486 303 aa15.33■□□□□ 0.04
COL5A1-201ENST00000371817 RGS19P49795 217 aa15.33■□□□□ 0.04
COL5A1-201ENST00000371817 SKP1P63208 163 aa15.33■□□□□ 0.04
COL5A1-201ENST00000371817 MBTD1Q05BQ5 628 aa15.33■□□□□ 0.04
COL5A1-201ENST00000371817 ERFEQ4G0M1 354 aa15.33■□□□□ 0.04
COL5A1-201ENST00000371817 C16orf46Q6P387 395 aa15.33■□□□□ 0.04
COL5A1-201ENST00000371817 CLNKQ7Z7G1 428 aa15.33■□□□□ 0.04
COL5A1-201ENST00000371817 FLAD1Q8NFF5 587 aa15.33■□□□□ 0.04
COL5A1-201ENST00000371817 CEP76Q8TAP6 659 aa15.33■□□□□ 0.04
COL5A1-201ENST00000371817 FCGR1BQ92637 280 aa15.33■□□□□ 0.04
COL5A1-201ENST00000371817 TCEAL3Q969E4 200 aa15.33■□□□□ 0.04
COL5A1-201ENST00000371817 FARSAQ9Y285 508 aaKnown RBP15.33■□□□□ 0.04
COL5A1-201ENST00000371817 CRYL1Q9Y2S2 319 aa15.33■□□□□ 0.04
COL5A1-201ENST00000371817 FAM86B2P0C5J1 330 aa15.33■□□□□ 0.04
COL5A1-201ENST00000371817 LACTB2Q53H82 288 aaPredicted RBP15.33■□□□□ 0.04
COL5A1-201ENST00000371817 SH3D19Q5HYK7 790 aa15.33■□□□□ 0.04
COL5A1-201ENST00000371817 NT5DC4Q86YG4 428 aa15.33■□□□□ 0.04
COL5A1-201ENST00000371817 CFAP206Q8IYR0 622 aa15.33■□□□□ 0.04
COL5A1-201ENST00000371817 ZNF433Q8N7K0 673 aaPredicted RBP15.33■□□□□ 0.04
COL5A1-201ENST00000371817 TMEM159Q96B96 161 aa15.33■□□□□ 0.04
COL5A1-201ENST00000371817 RUSC1Q9BVN2 902 aa15.33■□□□□ 0.04
COL5A1-201ENST00000371817 SPATA7Q9P0W8 599 aa15.33■□□□□ 0.04
COL5A1-201ENST00000371817 ANKDD1BA6NHY2 528 aa15.33■□□□□ 0.04
COL5A1-201ENST00000371817 GSG1L2A8MUP6 293 aa15.33■□□□□ 0.04
COL5A1-201ENST00000371817 CD44P16070 742 aaKnown RBP15.33■□□□□ 0.04
COL5A1-201ENST00000371817 ZNF7P17097 686 aaPredicted RBP15.33■□□□□ 0.04
COL5A1-201ENST00000371817 STOMP27105 288 aa15.33■□□□□ 0.04
COL5A1-201ENST00000371817 STAG3L4Q8TBR4 150 aa15.33■□□□□ 0.04
COL5A1-201ENST00000371817 FAM205CA6NFA0 338 aa15.33■□□□□ 0.04
COL5A1-201ENST00000371817 CD2P06729 351 aa15.33■□□□□ 0.04
COL5A1-201ENST00000371817 FDX1P10109 184 aa15.33■□□□□ 0.04
COL5A1-201ENST00000371817 RARAP10276 462 aa15.33■□□□□ 0.04
COL5A1-201ENST00000371817 NTSP30990 170 aa15.33■□□□□ 0.04
COL5A1-201ENST00000371817 BST1Q10588 318 aa15.33■□□□□ 0.04
COL5A1-201ENST00000371817 TDRD10Q5VZ19 366 aaKnown RBP15.33■□□□□ 0.04
COL5A1-201ENST00000371817 NEK7Q8TDX7 302 aa15.33■□□□□ 0.04
COL5A1-201ENST00000371817 KCNS3Q9BQ31 491 aa15.33■□□□□ 0.04
COL5A1-201ENST00000371817 SLCO1B3Q9NPD5 702 aa15.33■□□□□ 0.04
COL5A1-201ENST00000371817 IFT46Q9NQC8 304 aa15.33■□□□□ 0.04
COL5A1-201ENST00000371817 TRHDEQ9UKU6 1024 aa15.33■□□□□ 0.04
COL5A1-201ENST00000371817 MAB21L2Q9Y586 359 aa15.33■□□□□ 0.04
COL5A1-201ENST00000371817 RLN2P04090 185 aa15.33■□□□□ 0.04
COL5A1-201ENST00000371817 NUDT17P0C025 328 aa15.33■□□□□ 0.04
COL5A1-201ENST00000371817 ILDR2Q71H61 639 aa15.33■□□□□ 0.04
COL5A1-201ENST00000371817 SELENOMQ8WWX9 145 aa15.33■□□□□ 0.04
COL5A1-201ENST00000371817 FCRL4Q96PJ5 515 aa15.33■□□□□ 0.04
COL5A1-201ENST00000371817 ZNF471Q9BX82 626 aaPredicted RBP15.33■□□□□ 0.04
COL5A1-201ENST00000371817 PDE10AQ9Y233 779 aa15.33■□□□□ 0.04
COL5A1-201ENST00000371817 SERPINB7O75635 380 aa15.32■□□□□ 0.04
COL5A1-201ENST00000371817 CLPXO76031 633 aa15.32■□□□□ 0.04
COL5A1-201ENST00000371817 TGDSO95455 350 aa15.32■□□□□ 0.04
COL5A1-201ENST00000371817 PRAMEF1O95521 474 aa15.32■□□□□ 0.04
COL5A1-201ENST00000371817 RBM12BQ8IXT5 1001 aaKnown RBP15.32■□□□□ 0.04
COL5A1-201ENST00000371817 OR2L3Q8NG85 312 aa15.32■□□□□ 0.04
COL5A1-201ENST00000371817 SLC39A1Q9NY26 324 aa15.32■□□□□ 0.04
COL5A1-201ENST00000371817 PPIEQ9UNP9 301 aaKnown RBP15.32■□□□□ 0.04
COL5A1-201ENST00000371817 ERVV-1B6SEH8 477 aa15.32■□□□□ 0.04
COL5A1-201ENST00000371817 ERN1O75460 977 aaKnown RBP15.32■□□□□ 0.04
COL5A1-201ENST00000371817 MMP13P45452 471 aa15.32■□□□□ 0.04
COL5A1-201ENST00000371817 SEMA3AQ14563 771 aa15.32■□□□□ 0.04
COL5A1-201ENST00000371817 PRAMEF17Q5VTA0 474 aa15.32■□□□□ 0.04
COL5A1-201ENST00000371817 HELQQ8TDG4 1101 aa15.32■□□□□ 0.04
COL5A1-201ENST00000371817 PPP3R2Q96LZ3 170 aa15.32■□□□□ 0.04
COL5A1-201ENST00000371817 LHCGRP22888 699 aa15.32■□□□□ 0.04
COL5A1-201ENST00000371817 FSCN1Q16658 493 aaKnown RBP15.32■□□□□ 0.04
COL5A1-201ENST00000371817 PIWIL4Q7Z3Z4 852 aaKnown RBP15.32■□□□□ 0.04
COL5A1-201ENST00000371817 VCPIP1Q96JH7 1222 aa15.32■□□□□ 0.04
COL5A1-201ENST00000371817 QRFPRQ96P65 431 aa15.32■□□□□ 0.04
COL5A1-201ENST00000371817 MTMR10Q9NXD2 777 aa15.32■□□□□ 0.04
COL5A1-201ENST00000371817 UGT2B17O75795 530 aa15.32■□□□□ 0.04
COL5A1-201ENST00000371817 CCNYL3P0C7X3 344 aa15.32■□□□□ 0.04
COL5A1-201ENST00000371817 CSH1P0DML2 217 aa15.32■□□□□ 0.04
COL5A1-201ENST00000371817 CSH2P0DML3 217 aa15.32■□□□□ 0.04
COL5A1-201ENST00000371817 CCNFP41002 786 aa15.32■□□□□ 0.04
COL5A1-201ENST00000371817 GPAT3Q53EU6 434 aa15.32■□□□□ 0.04
COL5A1-201ENST00000371817 SEMA4BQ9NPR2 832 aaPredicted RBP15.32■□□□□ 0.04
COL5A1-201ENST00000371817 HOXC8P31273 242 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms