RNA–Protein interactions for RNA: ENST00000367630.8

VTA1-202, Transcript of vesicle trafficking 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTA1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-202ENST00000367630 COG4Q9H9E3 785 aa7.34□□□□□ -1.23
VTA1-202ENST00000367630 ALG13Q9NP73 1137 aaKnown RBP7.34□□□□□ -1.23
VTA1-202ENST00000367630 KLHL42Q9P2K6 505 aa7.34□□□□□ -1.23
VTA1-202ENST00000367630 MARCOQ9UEW3 520 aaPredicted RBP7.34□□□□□ -1.23
VTA1-202ENST00000367630 VWA7Q9Y334 891 aa7.34□□□□□ -1.23
VTA1-202ENST00000367630 UBA6A0AVT1 1052 aaPredicted RBP7.34□□□□□ -1.23
VTA1-202ENST00000367630 GUCY1B2O75343 617 aa7.34□□□□□ -1.23
VTA1-202ENST00000367630 BCAS2O75934 225 aaPredicted RBP7.34□□□□□ -1.23
VTA1-202ENST00000367630 DLDP09622 509 aaKnown RBP7.34□□□□□ -1.23
VTA1-202ENST00000367630 INPP1P49441 399 aa7.34□□□□□ -1.23
VTA1-202ENST00000367630 TUBP50607 506 aa7.34□□□□□ -1.23
VTA1-202ENST00000367630 USP46P62068 366 aa7.34□□□□□ -1.23
VTA1-202ENST00000367630 LAPTM5Q13571 262 aa7.34□□□□□ -1.23
VTA1-202ENST00000367630 KCNC3Q14003 757 aa7.34□□□□□ -1.23
VTA1-202ENST00000367630 PCDH19Q8TAB3 1148 aa7.34□□□□□ -1.23
VTA1-202ENST00000367630 CPB2Q96IY4 423 aa7.34□□□□□ -1.23
VTA1-202ENST00000367630 METTL2AQ96IZ6 378 aaKnown RBP7.34□□□□□ -1.23
VTA1-202ENST00000367630 RBM4BQ9BQ04 359 aaKnown RBP7.34□□□□□ -1.23
VTA1-202ENST00000367630 RBM4Q9BWF3 364 aaKnown RBP7.34□□□□□ -1.23
VTA1-202ENST00000367630 SMOC2Q9H3U7 446 aa7.34□□□□□ -1.23
VTA1-202ENST00000367630 CRNNQ9UBG3 495 aaPredicted RBP7.34□□□□□ -1.23
VTA1-202ENST00000367630 DNMT3LQ9UJW3 386 aa7.34□□□□□ -1.23
VTA1-202ENST00000367630 AURKCQ9UQB9 309 aa7.34□□□□□ -1.23
VTA1-202ENST00000367630 TLR6Q9Y2C9 796 aa7.34□□□□□ -1.23
VTA1-202ENST00000367630 PDHXO00330 501 aa7.34□□□□□ -1.24
VTA1-202ENST00000367630 PDE9AO76083 593 aa7.34□□□□□ -1.24
VTA1-202ENST00000367630 IMPDH1P20839 514 aa7.34□□□□□ -1.24
VTA1-202ENST00000367630 PIK3CBP42338 1070 aa7.34□□□□□ -1.24
VTA1-202ENST00000367630 CDH4P55283 916 aa7.34□□□□□ -1.24
VTA1-202ENST00000367630 LCP2Q13094 533 aa7.34□□□□□ -1.24
VTA1-202ENST00000367630 BMPR2Q13873 1038 aa7.34□□□□□ -1.24
VTA1-202ENST00000367630 TMEM26Q6ZUK4 368 aa7.34□□□□□ -1.24
VTA1-202ENST00000367630 MARK4Q96L34 752 aa7.34□□□□□ -1.24
VTA1-202ENST00000367630 SLC17A7Q9P2U7 560 aa7.34□□□□□ -1.24
VTA1-202ENST00000367630 A0A1W2PPM1 405 aa7.33□□□□□ -1.24
VTA1-202ENST00000367630 TBKBP1A7MCY6 615 aa7.33□□□□□ -1.24
VTA1-202ENST00000367630 CSH1P0DML2 217 aa7.33□□□□□ -1.24
VTA1-202ENST00000367630 CSH2P0DML3 217 aa7.33□□□□□ -1.24
VTA1-202ENST00000367630 CXCR2P25025 360 aa7.33□□□□□ -1.24
VTA1-202ENST00000367630 GABARAPL2P60520 117 aa7.33□□□□□ -1.24
VTA1-202ENST00000367630 SP140Q13342 867 aa7.33□□□□□ -1.24
VTA1-202ENST00000367630 NCBP2-AS2Q69YL0 99 aa7.33□□□□□ -1.24
VTA1-202ENST00000367630 PDSS2Q86YH6 399 aa7.33□□□□□ -1.24
VTA1-202ENST00000367630 ERI1Q8IV48 349 aaKnown RBP7.33□□□□□ -1.24
VTA1-202ENST00000367630 BHLHE22Q8NFJ8 381 aaPredicted RBP7.33□□□□□ -1.24
VTA1-202ENST00000367630 RFWD2Q8NHY2 731 aa7.33□□□□□ -1.24
VTA1-202ENST00000367630 ITCHQ96J02 903 aa7.33□□□□□ -1.24
VTA1-202ENST00000367630 RPRD1AQ96P16 312 aaPredicted RBP7.33□□□□□ -1.24
VTA1-202ENST00000367630 ADAM7Q9H2U9 754 aa7.33□□□□□ -1.24
VTA1-202ENST00000367630 NXF3Q9H4D5 531 aaKnown RBP7.33□□□□□ -1.24
VTA1-202ENST00000367630 ADGRE2Q9UHX3 823 aa7.33□□□□□ -1.24
VTA1-202ENST00000367630 TISP43B9A030 160 aa7.33□□□□□ -1.24
VTA1-202ENST00000367630 KRT36O76013 467 aa7.33□□□□□ -1.24
VTA1-202ENST00000367630 NDST3O95803 873 aa7.33□□□□□ -1.24
VTA1-202ENST00000367630 BCL10O95999 233 aa7.33□□□□□ -1.24
VTA1-202ENST00000367630 ESR1P03372 595 aa7.33□□□□□ -1.24
VTA1-202ENST00000367630 CYP2B6P20813 491 aa7.33□□□□□ -1.24
VTA1-202ENST00000367630 TNFSF9P41273 254 aa7.33□□□□□ -1.24
VTA1-202ENST00000367630 ARHGEF7Q14155 803 aa7.33□□□□□ -1.24
VTA1-202ENST00000367630 TSTD2Q5T7W7 516 aa7.33□□□□□ -1.24
VTA1-202ENST00000367630 RINLQ6ZS11 566 aa7.33□□□□□ -1.24
VTA1-202ENST00000367630 C10orf107Q8IVU9 208 aa7.33□□□□□ -1.24
VTA1-202ENST00000367630 LINC00471Q8N535 108 aa7.33□□□□□ -1.24
VTA1-202ENST00000367630 NAT14Q8WUY8 206 aa7.33□□□□□ -1.24
VTA1-202ENST00000367630 NPY6RQ99463 290 aa7.33□□□□□ -1.24
VTA1-202ENST00000367630 TDRD1Q9BXT4 1180 aaKnown RBP7.33□□□□□ -1.24
VTA1-202ENST00000367630 NMUR2Q9GZQ4 415 aa7.33□□□□□ -1.24
VTA1-202ENST00000367630 GMIPQ9P107 970 aa7.33□□□□□ -1.24
VTA1-202ENST00000367630 WARS2Q9UGM6 360 aaKnown RBP7.33□□□□□ -1.24
VTA1-202ENST00000367630 MYH11P35749 1972 aa7.33□□□□□ -1.24
VTA1-202ENST00000367630 TCRBV7S2A1N4TA0A589 114 aa7.33□□□□□ -1.24
VTA1-202ENST00000367630 PIRO00625 290 aa7.33□□□□□ -1.24
VTA1-202ENST00000367630 CLOCKO15516 846 aa7.33□□□□□ -1.24
VTA1-202ENST00000367630 RRM2P31350 389 aa7.33□□□□□ -1.24
VTA1-202ENST00000367630 CXCR3P49682 368 aa7.33□□□□□ -1.24
VTA1-202ENST00000367630 CNTN1Q12860 1018 aa7.33□□□□□ -1.24
VTA1-202ENST00000367630 TAF1AQ15573 450 aaPredicted RBP7.33□□□□□ -1.24
VTA1-202ENST00000367630 SYTL3Q4VX76 610 aa7.33□□□□□ -1.24
VTA1-202ENST00000367630 C10orf120Q5SQS8 335 aa7.33□□□□□ -1.24
VTA1-202ENST00000367630 TRIM63Q969Q1 353 aa7.33□□□□□ -1.24
VTA1-202ENST00000367630 CNDP2Q96KP4 475 aaKnown RBP7.33□□□□□ -1.24
VTA1-202ENST00000367630 PPP1R16BQ96T49 567 aa7.33□□□□□ -1.24
VTA1-202ENST00000367630 SPATA5L1Q9BVQ7 753 aa7.33□□□□□ -1.24
VTA1-202ENST00000367630 GPR63Q9BZJ6 419 aa7.33□□□□□ -1.24
VTA1-202ENST00000367630 XYLT2Q9H1B5 865 aa7.33□□□□□ -1.24
VTA1-202ENST00000367630 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.33□□□□□ -1.24
VTA1-202ENST00000367630 DHRS12A0PJE2 317 aa7.33□□□□□ -1.24
VTA1-202ENST00000367630 FAM234BA2RU67 622 aa7.33□□□□□ -1.24
VTA1-202ENST00000367630 SOWAHBA6NEL2 793 aa7.33□□□□□ -1.24
VTA1-202ENST00000367630 E9PBE3 544 aa7.33□□□□□ -1.24
VTA1-202ENST00000367630 PRMT3O60678 531 aa7.33□□□□□ -1.24
VTA1-202ENST00000367630 RNASEH1O60930 286 aaKnown RBP7.33□□□□□ -1.24
VTA1-202ENST00000367630 AVILO75366 819 aa7.33□□□□□ -1.24
VTA1-202ENST00000367630 IL6P05231 212 aa7.33□□□□□ -1.24
VTA1-202ENST00000367630 ZSCAN5DPP0CG00 497 aa7.33□□□□□ -1.24
VTA1-202ENST00000367630 NFKB2Q00653 900 aa7.33□□□□□ -1.24
VTA1-202ENST00000367630 EN1Q05925 392 aaPredicted RBP7.33□□□□□ -1.24
VTA1-202ENST00000367630 TLDC1Q6P9B6 456 aa7.33□□□□□ -1.24
VTA1-202ENST00000367630 GPRIN3Q6ZVF9 776 aa7.33□□□□□ -1.24
VTA1-202ENST00000367630 SAMD7Q7Z3H4 446 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms