RNA–Protein interactions for RNA: ENST00000366666.6

CAPN9-203, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-203ENST00000366666 LRRC40Q9H9A6 602 aa12.33□□□□□ -0.44
CAPN9-203ENST00000366666 SLC24A3Q9HC58 644 aa12.33□□□□□ -0.44
CAPN9-203ENST00000366666 SCUBE2Q9NQ36 999 aa12.33□□□□□ -0.44
CAPN9-203ENST00000366666 HEBP1Q9NRV9 189 aa12.33□□□□□ -0.44
CAPN9-203ENST00000366666 SYBUQ9NX95 663 aa12.33□□□□□ -0.44
CAPN9-203ENST00000366666 CHKBQ9Y259 395 aa12.33□□□□□ -0.44
CAPN9-203ENST00000366666 MUC3AQ02505 3323 aa12.33□□□□□ -0.44
CAPN9-203ENST00000366666 A0A0U1RQS6 177 aa12.33□□□□□ -0.44
CAPN9-203ENST00000366666 CCDC78A2IDD5 438 aa12.33□□□□□ -0.44
CAPN9-203ENST00000366666 PIGNO95427 931 aa12.33□□□□□ -0.44
CAPN9-203ENST00000366666 PRLP01236 227 aa12.33□□□□□ -0.44
CAPN9-203ENST00000366666 VIMP08670 466 aaKnown RBP12.33□□□□□ -0.44
CAPN9-203ENST00000366666 ATP5DP30049 168 aa12.33□□□□□ -0.44
CAPN9-203ENST00000366666 GPX6P59796 221 aa12.33□□□□□ -0.44
CAPN9-203ENST00000366666 CDK16Q00536 496 aa12.33□□□□□ -0.44
CAPN9-203ENST00000366666 TRAF2Q12933 501 aa12.33□□□□□ -0.44
CAPN9-203ENST00000366666 NR1H3Q13133 447 aa12.33□□□□□ -0.44
CAPN9-203ENST00000366666 MPP3Q13368 585 aa12.33□□□□□ -0.44
CAPN9-203ENST00000366666 GALNT3Q14435 633 aa12.33□□□□□ -0.44
CAPN9-203ENST00000366666 SMAD1Q15797 465 aaKnown RBP12.33□□□□□ -0.44
CAPN9-203ENST00000366666 CCDC38Q502W7 563 aa12.33□□□□□ -0.44
CAPN9-203ENST00000366666 C22orf39Q6P5X5 142 aa12.33□□□□□ -0.44
CAPN9-203ENST00000366666 CES3Q6UWW8 571 aa12.33□□□□□ -0.44
CAPN9-203ENST00000366666 PPP1R21Q6ZMI0 780 aa12.33□□□□□ -0.44
CAPN9-203ENST00000366666 CAMK1DQ8IU85 385 aa12.33□□□□□ -0.44
CAPN9-203ENST00000366666 GBP7Q8N8V2 638 aaPredicted RBP12.33□□□□□ -0.44
CAPN9-203ENST00000366666 DNAAF3Q8N9W5 541 aa12.33□□□□□ -0.44
CAPN9-203ENST00000366666 CHST14Q8NCH0 376 aa12.33□□□□□ -0.44
CAPN9-203ENST00000366666 FRS2Q8WU20 508 aa12.33□□□□□ -0.44
CAPN9-203ENST00000366666 NUDCD1Q96RS6 583 aa12.33□□□□□ -0.44
CAPN9-203ENST00000366666 ACOX2Q99424 681 aa12.33□□□□□ -0.44
CAPN9-203ENST00000366666 ELOVL2Q9NXB9 296 aa12.33□□□□□ -0.44
CAPN9-203ENST00000366666 SLC25A13Q9UJS0 675 aa12.33□□□□□ -0.44
CAPN9-203ENST00000366666 TBC1D3BA6NDS4 549 aa12.32□□□□□ -0.44
CAPN9-203ENST00000366666 ERI2A8K979 691 aaKnown RBP12.32□□□□□ -0.44
CAPN9-203ENST00000366666 SNX3O60493 162 aa12.32□□□□□ -0.44
CAPN9-203ENST00000366666 KAT7O95251 611 aa12.32□□□□□ -0.44
CAPN9-203ENST00000366666 ATXN1LP0C7T5 689 aaKnown RBP12.32□□□□□ -0.44
CAPN9-203ENST00000366666 PIRTP0C851 137 aa12.32□□□□□ -0.44
CAPN9-203ENST00000366666 HLA-EP13747 358 aa12.32□□□□□ -0.44
CAPN9-203ENST00000366666 GALK1P51570 392 aa12.32□□□□□ -0.44
CAPN9-203ENST00000366666 CCNHP51946 323 aaPredicted RBP12.32□□□□□ -0.44
CAPN9-203ENST00000366666 DMC1Q14565 340 aa12.32□□□□□ -0.44
CAPN9-203ENST00000366666 NCEH1Q6PIU2 408 aa12.32□□□□□ -0.44
CAPN9-203ENST00000366666 DPY19L3Q6ZPD9 716 aa12.32□□□□□ -0.44
CAPN9-203ENST00000366666 BBS5Q8N3I7 341 aa12.32□□□□□ -0.44
CAPN9-203ENST00000366666 ZNF778Q96MU6 729 aa12.32□□□□□ -0.44
CAPN9-203ENST00000366666 TRIB3Q96RU7 358 aa12.32□□□□□ -0.44
CAPN9-203ENST00000366666 LOC285095A0A1B0GVY8 99 aa12.32□□□□□ -0.44
CAPN9-203ENST00000366666 SMAPO00193 183 aa12.32□□□□□ -0.44
CAPN9-203ENST00000366666 ATP9BO43861 1147 aa12.32□□□□□ -0.44
CAPN9-203ENST00000366666 TTC4O95801 387 aa12.32□□□□□ -0.44
CAPN9-203ENST00000366666 SERPINF2P08697 491 aa12.32□□□□□ -0.44
CAPN9-203ENST00000366666 DLDP09622 509 aaKnown RBP12.32□□□□□ -0.44
CAPN9-203ENST00000366666 NSUN2Q08J23 767 aaKnown RBP eCLIP12.32□□□□□ -0.44
CAPN9-203ENST00000366666 MSLNQ13421 630 aaPredicted RBP12.32□□□□□ -0.44
CAPN9-203ENST00000366666 SLC1A5Q15758 541 aa12.32□□□□□ -0.44
CAPN9-203ENST00000366666 SIRPB2Q5JXA9 342 aa12.32□□□□□ -0.44
CAPN9-203ENST00000366666 NAPEPLDQ6IQ20 393 aa12.32□□□□□ -0.44
CAPN9-203ENST00000366666 RELL1Q8IUW5 271 aa12.32□□□□□ -0.44
CAPN9-203ENST00000366666 UNC5BQ8IZJ1 945 aa12.32□□□□□ -0.44
CAPN9-203ENST00000366666 ZNF557Q8N988 423 aaPredicted RBP12.32□□□□□ -0.44
CAPN9-203ENST00000366666 OR2AP1Q8NGE2 309 aa12.32□□□□□ -0.44
CAPN9-203ENST00000366666 OR2A12Q8NGT7 310 aa12.32□□□□□ -0.44
CAPN9-203ENST00000366666 PYROXD1Q8WU10 500 aa12.32□□□□□ -0.44
CAPN9-203ENST00000366666 PDCD6IPQ8WUM4 868 aaKnown RBP12.32□□□□□ -0.44
CAPN9-203ENST00000366666 FOXP3Q9BZS1 431 aa12.32□□□□□ -0.44
CAPN9-203ENST00000366666 XAB2Q9HCS7 855 aaKnown RBP12.32□□□□□ -0.44
CAPN9-203ENST00000366666 IL1RAPL1Q9NZN1 696 aa12.32□□□□□ -0.44
CAPN9-203ENST00000366666 RAI2Q9Y5P3 530 aa12.32□□□□□ -0.44
CAPN9-203ENST00000366666 MAD1L1Q9Y6D9 718 aa12.32□□□□□ -0.44
CAPN9-203ENST00000366666 MLNP12872 115 aa12.31□□□□□ -0.44
CAPN9-203ENST00000366666 GEMIN4P57678 1058 aaKnown RBP12.31□□□□□ -0.44
CAPN9-203ENST00000366666 SULT2A1Q06520 285 aa12.31□□□□□ -0.44
CAPN9-203ENST00000366666 POU6F1Q14863 301 aa12.31□□□□□ -0.44
CAPN9-203ENST00000366666 ZSWIM9Q86XI8 627 aa12.31□□□□□ -0.44
CAPN9-203ENST00000366666 RYBPQ8N488 228 aaPredicted RBP12.31□□□□□ -0.44
CAPN9-203ENST00000366666 MAFAQ8NHW3 353 aaPredicted RBP12.31□□□□□ -0.44
CAPN9-203ENST00000366666 CSGALNACT1Q8TDX6 532 aa12.31□□□□□ -0.44
CAPN9-203ENST00000366666 PTPRN2Q92932 1015 aa12.31□□□□□ -0.44
CAPN9-203ENST00000366666 CFAP36Q96G28 342 aa12.31□□□□□ -0.44
CAPN9-203ENST00000366666 TDRD1Q9BXT4 1180 aaKnown RBP12.31□□□□□ -0.44
CAPN9-203ENST00000366666 EBF2Q9HAK2 575 aa12.31□□□□□ -0.44
CAPN9-203ENST00000366666 VPS45Q9NRW7 570 aa12.31□□□□□ -0.44
CAPN9-203ENST00000366666 BAIAP2L1Q9UHR4 511 aa12.31□□□□□ -0.44
CAPN9-203ENST00000366666 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.31□□□□□ -0.44
CAPN9-203ENST00000366666 SHISA7A6NL88 538 aa12.3□□□□□ -0.44
CAPN9-203ENST00000366666 SPECC1L-ADORA2AF8WAN1 911 aa12.3□□□□□ -0.44
CAPN9-203ENST00000366666 NDC80O14777 642 aa12.3□□□□□ -0.44
CAPN9-203ENST00000366666 CTHP32929 405 aa12.3□□□□□ -0.44
CAPN9-203ENST00000366666 CDK18Q07002 472 aa12.3□□□□□ -0.44
CAPN9-203ENST00000366666 CDH17Q12864 832 aa12.3□□□□□ -0.44
CAPN9-203ENST00000366666 ZNF234Q14588 700 aa12.3□□□□□ -0.44
CAPN9-203ENST00000366666 GALNTL6Q49A17 601 aa12.3□□□□□ -0.44
CAPN9-203ENST00000366666 EGFLAMQ63HQ2 1017 aa12.3□□□□□ -0.44
CAPN9-203ENST00000366666 CASC4Q6P4E1 433 aa12.3□□□□□ -0.44
CAPN9-203ENST00000366666 EXOC3L1Q86VI1 746 aa12.3□□□□□ -0.44
CAPN9-203ENST00000366666 EPS8L3Q8TE67 593 aaKnown RBP12.3□□□□□ -0.44
CAPN9-203ENST00000366666 WFIKKN2Q8TEU8 576 aa12.3□□□□□ -0.44
CAPN9-203ENST00000366666 FCRL3Q96P31 734 aaPredicted RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms