RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 MTRRQ9UBK8 725 aa12.78□□□□□ -0.36
VAMP1-201ENST00000361716 TSR3Q9UJK0 312 aaKnown RBP12.78□□□□□ -0.36
VAMP1-201ENST00000361716 TRAF6Q9Y4K3 522 aa12.78□□□□□ -0.36
VAMP1-201ENST00000361716 SOBPA7XYQ1 873 aa12.78□□□□□ -0.36
VAMP1-201ENST00000361716 SNX2O60749 519 aa12.78□□□□□ -0.36
VAMP1-201ENST00000361716 SLC4A1P02730 911 aa12.78□□□□□ -0.36
VAMP1-201ENST00000361716 PTPN7P35236 360 aa12.78□□□□□ -0.36
VAMP1-201ENST00000361716 SULT1E1P49888 294 aa12.78□□□□□ -0.36
VAMP1-201ENST00000361716 SLC12A1Q13621 1099 aa12.78□□□□□ -0.36
VAMP1-201ENST00000361716 TMEM132DQ14C87 1099 aa12.78□□□□□ -0.36
VAMP1-201ENST00000361716 FAM214AQ32MH5 1076 aa12.78□□□□□ -0.36
VAMP1-201ENST00000361716 INAVAQ3KP66 663 aa12.78□□□□□ -0.36
VAMP1-201ENST00000361716 ARL13BQ3SXY8 428 aa12.78□□□□□ -0.36
VAMP1-201ENST00000361716 CERCAMQ5T4B2 595 aa12.78□□□□□ -0.36
VAMP1-201ENST00000361716 DCLRE1AQ6PJP8 1040 aa12.78□□□□□ -0.36
VAMP1-201ENST00000361716 MPZL3Q6UWV2 235 aa12.78□□□□□ -0.36
VAMP1-201ENST00000361716 ILDR2Q71H61 639 aa12.78□□□□□ -0.36
VAMP1-201ENST00000361716 BNIPLQ7Z465 357 aa12.78□□□□□ -0.36
VAMP1-201ENST00000361716 SEPT1Q8WYJ6 367 aa12.78□□□□□ -0.36
VAMP1-201ENST00000361716 HDAC10Q969S8 669 aa12.78□□□□□ -0.36
VAMP1-201ENST00000361716 LRRC39Q96DD0 335 aa12.78□□□□□ -0.36
VAMP1-201ENST00000361716 OLFM1Q99784 485 aa12.78□□□□□ -0.36
VAMP1-201ENST00000361716 UNC93B1Q9H1C4 597 aa12.78□□□□□ -0.36
VAMP1-201ENST00000361716 VPS33BQ9H267 617 aa12.78□□□□□ -0.36
VAMP1-201ENST00000361716 LTB4R2Q9NPC1 389 aa12.78□□□□□ -0.36
VAMP1-201ENST00000361716 XPR1Q9UBH6 696 aa12.78□□□□□ -0.36
VAMP1-201ENST00000361716 BAG5Q9UL15 447 aa12.78□□□□□ -0.36
VAMP1-201ENST00000361716 GPR25O00155 361 aa12.78□□□□□ -0.36
VAMP1-201ENST00000361716 GRID2O43424 1007 aa12.78□□□□□ -0.36
VAMP1-201ENST00000361716 YWHAQP27348 245 aa12.78□□□□□ -0.36
VAMP1-201ENST00000361716 TTKP33981 857 aa12.78□□□□□ -0.36
VAMP1-201ENST00000361716 EFNA5P52803 228 aa12.78□□□□□ -0.36
VAMP1-201ENST00000361716 RAB15P59190 212 aa12.78□□□□□ -0.36
VAMP1-201ENST00000361716 SAMD4BQ5PRF9 694 aaKnown RBP12.78□□□□□ -0.36
VAMP1-201ENST00000361716 STK32CQ86UX6 486 aa12.78□□□□□ -0.36
VAMP1-201ENST00000361716 TMEM126BQ8IUX1 230 aa12.78□□□□□ -0.36
VAMP1-201ENST00000361716 FBXO16Q8IX29 292 aaPredicted RBP12.78□□□□□ -0.36
VAMP1-201ENST00000361716 CCDC185Q8N715 623 aa12.78□□□□□ -0.36
VAMP1-201ENST00000361716 ZNF280CQ8ND82 737 aa12.78□□□□□ -0.36
VAMP1-201ENST00000361716 CDT1Q9H211 546 aa12.78□□□□□ -0.36
VAMP1-201ENST00000361716 RIC8BQ9NVN3 520 aa12.78□□□□□ -0.36
VAMP1-201ENST00000361716 CLASP2O75122 1294 aaKnown RBP12.77□□□□□ -0.36
VAMP1-201ENST00000361716 PHC1P78364 1004 aa12.77□□□□□ -0.36
VAMP1-201ENST00000361716 CLEC6AQ6EIG7 209 aa12.77□□□□□ -0.36
VAMP1-201ENST00000361716 TRNP1Q6NT89 227 aa12.77□□□□□ -0.36
VAMP1-201ENST00000361716 SLC16A10Q8TF71 515 aa12.77□□□□□ -0.36
VAMP1-201ENST00000361716 C9orf16Q9BUW7 83 aa12.77□□□□□ -0.36
VAMP1-201ENST00000361716 NANOGQ9H9S0 305 aa12.77□□□□□ -0.36
VAMP1-201ENST00000361716 MKS1Q9NXB0 559 aa12.77□□□□□ -0.36
VAMP1-201ENST00000361716 CACNA2D2Q9NY47 1150 aa12.77□□□□□ -0.36
VAMP1-201ENST00000361716 KIAA1522Q9P206 1035 aaPredicted RBP12.77□□□□□ -0.36
VAMP1-201ENST00000361716 CARD8Q9Y2G2 431 aa12.77□□□□□ -0.36
VAMP1-201ENST00000361716 BOLA1Q9Y3E2 137 aa12.77□□□□□ -0.36
VAMP1-201ENST00000361716 CITO14578 2027 aa12.77□□□□□ -0.36
VAMP1-201ENST00000361716 G3V2L1 256 aa12.77□□□□□ -0.37
VAMP1-201ENST00000361716 TBX1O43435 398 aa12.77□□□□□ -0.37
VAMP1-201ENST00000361716 IDH3BO43837 385 aa12.77□□□□□ -0.37
VAMP1-201ENST00000361716 PRKCGP05129 697 aa12.77□□□□□ -0.37
VAMP1-201ENST00000361716 HOXC6P09630 235 aa12.77□□□□□ -0.37
VAMP1-201ENST00000361716 DCKP27707 260 aa12.77□□□□□ -0.37
VAMP1-201ENST00000361716 OXTRP30559 389 aa12.77□□□□□ -0.37
VAMP1-201ENST00000361716 CLK3P49761 638 aaKnown RBP12.77□□□□□ -0.37
VAMP1-201ENST00000361716 BACE1P56817 501 aa12.77□□□□□ -0.37
VAMP1-201ENST00000361716 ITKQ08881 620 aa12.77□□□□□ -0.37
VAMP1-201ENST00000361716 SELENBP1Q13228 472 aa12.77□□□□□ -0.37
VAMP1-201ENST00000361716 VPS26BQ4G0F5 336 aa12.77□□□□□ -0.37
VAMP1-201ENST00000361716 ATAD3BQ5T9A4 648 aa12.77□□□□□ -0.37
VAMP1-201ENST00000361716 PPP4R4Q6NUP7 873 aa12.77□□□□□ -0.37
VAMP1-201ENST00000361716 ZNF534Q76KX8 674 aa12.77□□□□□ -0.37
VAMP1-201ENST00000361716 PAGE2Q7Z2X7 111 aa12.77□□□□□ -0.37
VAMP1-201ENST00000361716 CTU1Q7Z7A3 348 aaKnown RBP12.77□□□□□ -0.37
VAMP1-201ENST00000361716 SLC41A1Q8IVJ1 513 aa12.77□□□□□ -0.37
VAMP1-201ENST00000361716 SFRP1Q8N474 314 aa12.77□□□□□ -0.37
VAMP1-201ENST00000361716 SEPT8Q92599 483 aa12.77□□□□□ -0.37
VAMP1-201ENST00000361716 HDAC11Q96DB2 347 aa12.77□□□□□ -0.37
VAMP1-201ENST00000361716 SH3YL1Q96HL8 342 aaPredicted RBP12.77□□□□□ -0.37
VAMP1-201ENST00000361716 FEM1CQ96JP0 617 aa12.77□□□□□ -0.37
VAMP1-201ENST00000361716 PRDM12Q9H4Q4 367 aa12.77□□□□□ -0.37
VAMP1-201ENST00000361716 MRPL40Q9NQ50 206 aaKnown RBP12.77□□□□□ -0.37
VAMP1-201ENST00000361716 GDAP2Q9NXN4 497 aa12.77□□□□□ -0.37
VAMP1-201ENST00000361716 DPP3Q9NY33 737 aa12.77□□□□□ -0.37
VAMP1-201ENST00000361716 MAGED1Q9Y5V3 778 aaPredicted RBP12.77□□□□□ -0.37
VAMP1-201ENST00000361716 TMEM114B3SHH9 223 aa12.76□□□□□ -0.37
VAMP1-201ENST00000361716 SNRPB2P08579 225 aaKnown RBP12.76□□□□□ -0.37
VAMP1-201ENST00000361716 HMGB2P26583 209 aaKnown RBP12.76□□□□□ -0.37
VAMP1-201ENST00000361716 GPD2P43304 727 aa12.76□□□□□ -0.37
VAMP1-201ENST00000361716 POU6F1Q14863 301 aa12.76□□□□□ -0.37
VAMP1-201ENST00000361716 BROXQ5VW32 411 aa12.76□□□□□ -0.37
VAMP1-201ENST00000361716 SYTL1Q8IYJ3 562 aa12.76□□□□□ -0.37
VAMP1-201ENST00000361716 LGI2Q8N0V4 545 aa12.76□□□□□ -0.37
VAMP1-201ENST00000361716 OR7A2PQ8NGA2 310 aa12.76□□□□□ -0.37
VAMP1-201ENST00000361716 ZNF420Q8TAQ5 688 aaPredicted RBP12.76□□□□□ -0.37
VAMP1-201ENST00000361716 OTUD5Q96G74 571 aa12.76□□□□□ -0.37
VAMP1-201ENST00000361716 ARPC5LQ9BPX5 153 aa12.76□□□□□ -0.37
VAMP1-201ENST00000361716 MOCS1Q9NZB8 636 aa12.76□□□□□ -0.37
VAMP1-201ENST00000361716 HACD3Q9P035 362 aa12.76□□□□□ -0.37
VAMP1-201ENST00000361716 MSCO60682 206 aa12.76□□□□□ -0.37
VAMP1-201ENST00000361716 PGAM1P18669 254 aa12.76□□□□□ -0.37
VAMP1-201ENST00000361716 CTBP1Q13363 440 aa12.76□□□□□ -0.37
VAMP1-201ENST00000361716 TNFAIP1Q13829 316 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms