RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.25□□□□□ -0.61
SSU72-202ENST00000359060 AOC1P19801 751 aa11.25□□□□□ -0.61
SSU72-202ENST00000359060 TYMPP19971 482 aa11.25□□□□□ -0.61
SSU72-202ENST00000359060 ALFQ53S48 1182 aa11.25□□□□□ -0.61
SSU72-202ENST00000359060 SGO1Q5FBB7 561 aa11.25□□□□□ -0.61
SSU72-202ENST00000359060 STXBP5Q5T5C0 1151 aa11.25□□□□□ -0.61
SSU72-202ENST00000359060 FBXL22Q6P050 247 aa11.25□□□□□ -0.61
SSU72-202ENST00000359060 C17orf99Q6UX52 265 aa11.25□□□□□ -0.61
SSU72-202ENST00000359060 NAPRTQ6XQN6 538 aa11.25□□□□□ -0.61
SSU72-202ENST00000359060 CUZD1Q86UP6 607 aa11.25□□□□□ -0.61
SSU72-202ENST00000359060 FBXO39Q8N4B4 442 aa11.25□□□□□ -0.61
SSU72-202ENST00000359060 DBF4BQ8NFT6 615 aa11.25□□□□□ -0.61
SSU72-202ENST00000359060 CDC26Q8NHZ8 85 aa11.25□□□□□ -0.61
SSU72-202ENST00000359060 RP9Q8TA86 221 aaKnown RBP11.25□□□□□ -0.61
SSU72-202ENST00000359060 CCDC106Q9BWC9 280 aa11.25□□□□□ -0.61
SSU72-202ENST00000359060 SMOC2Q9H3U7 446 aa11.25□□□□□ -0.61
SSU72-202ENST00000359060 PIF1Q9H611 641 aa11.25□□□□□ -0.61
SSU72-202ENST00000359060 VPS45Q9NRW7 570 aa11.25□□□□□ -0.61
SSU72-202ENST00000359060 TAS2R13Q9NYV9 303 aa11.25□□□□□ -0.61
SSU72-202ENST00000359060 PKP3Q9Y446 797 aa11.25□□□□□ -0.61
SSU72-202ENST00000359060 A8MX80 341 aa11.25□□□□□ -0.61
SSU72-202ENST00000359060 BTN3A1O00481 513 aa11.25□□□□□ -0.61
SSU72-202ENST00000359060 KIF1CO43896 1103 aaKnown RBP11.25□□□□□ -0.61
SSU72-202ENST00000359060 VPS26AO75436 327 aa11.25□□□□□ -0.61
SSU72-202ENST00000359060 IPO13O94829 963 aaKnown RBP11.25□□□□□ -0.61
SSU72-202ENST00000359060 COL6A2P12110 1019 aa11.25□□□□□ -0.61
SSU72-202ENST00000359060 OR1D2P34982 312 aa11.25□□□□□ -0.61
SSU72-202ENST00000359060 BLMHQ13867 455 aa11.25□□□□□ -0.61
SSU72-202ENST00000359060 PTPRCAPQ14761 206 aa11.25□□□□□ -0.61
SSU72-202ENST00000359060 C6orf10Q5SRN2 563 aa11.25□□□□□ -0.61
SSU72-202ENST00000359060 TMCO4Q5TGY1 634 aa11.25□□□□□ -0.61
SSU72-202ENST00000359060 PBXIP1Q96AQ6 731 aa11.25□□□□□ -0.61
SSU72-202ENST00000359060 TMEM169Q96HH4 297 aa11.25□□□□□ -0.61
SSU72-202ENST00000359060 RTKNQ9BST9 563 aa11.25□□□□□ -0.61
SSU72-202ENST00000359060 KIFC1Q9BW19 673 aa11.25□□□□□ -0.61
SSU72-202ENST00000359060 DRC3Q9H069 523 aa11.25□□□□□ -0.61
SSU72-202ENST00000359060 SEMA6AQ9H2E6 1030 aa11.25□□□□□ -0.61
SSU72-202ENST00000359060 SYTL2Q9HCH5 934 aa11.25□□□□□ -0.61
SSU72-202ENST00000359060 RBBP6Q7Z6E9 1792 aaKnown RBP11.25□□□□□ -0.61
SSU72-202ENST00000359060 DPPA5A6NC42 116 aa11.25□□□□□ -0.61
SSU72-202ENST00000359060 C9JVG2 144 aa11.25□□□□□ -0.61
SSU72-202ENST00000359060 CD3EAPO15446 510 aaKnown RBP11.25□□□□□ -0.61
SSU72-202ENST00000359060 BAIAP3O94812 1187 aa11.25□□□□□ -0.61
SSU72-202ENST00000359060 ABL2P42684 1182 aa11.25□□□□□ -0.61
SSU72-202ENST00000359060 RHOAP61586 193 aa11.25□□□□□ -0.61
SSU72-202ENST00000359060 BFSP2Q13515 415 aa11.25□□□□□ -0.61
SSU72-202ENST00000359060 MAP7Q14244 749 aa11.25□□□□□ -0.61
SSU72-202ENST00000359060 METTL21CQ5VZV1 264 aa11.25□□□□□ -0.61
SSU72-202ENST00000359060 C11orf84Q9BUA3 381 aaPredicted RBP11.25□□□□□ -0.61
SSU72-202ENST00000359060 BTRCQ9Y297 605 aa11.25□□□□□ -0.61
SSU72-202ENST00000359060 ARID2Q68CP9 1835 aa11.25□□□□□ -0.61
SSU72-202ENST00000359060 CA12O43570 354 aa11.24□□□□□ -0.61
SSU72-202ENST00000359060 SEC24DO94855 1032 aaPredicted RBP11.24□□□□□ -0.61
SSU72-202ENST00000359060 HAPLN1P10915 354 aaPredicted RBP11.24□□□□□ -0.61
SSU72-202ENST00000359060 ACVRL1P37023 503 aa11.24□□□□□ -0.61
SSU72-202ENST00000359060 ACLYP53396 1101 aa11.24□□□□□ -0.61
SSU72-202ENST00000359060 BTKQ06187 659 aa11.24□□□□□ -0.61
SSU72-202ENST00000359060 ELAVL2Q12926 359 aaKnown RBP11.24□□□□□ -0.61
SSU72-202ENST00000359060 PLD1Q13393 1074 aa11.24□□□□□ -0.61
SSU72-202ENST00000359060 PTPRNQ16849 979 aa11.24□□□□□ -0.61
SSU72-202ENST00000359060 CTC1Q2NKJ3 1217 aa11.24□□□□□ -0.61
SSU72-202ENST00000359060 OTUD1Q5VV17 481 aaPredicted RBP11.24□□□□□ -0.61
SSU72-202ENST00000359060 KIAA0930Q6ICG6 404 aaPredicted RBP11.24□□□□□ -0.61
SSU72-202ENST00000359060 TM6SF2Q9BZW4 377 aa11.24□□□□□ -0.61
SSU72-202ENST00000359060 FGFR3P22607 806 aa11.24□□□□□ -0.61
SSU72-202ENST00000359060 HMOX2P30519 316 aa11.24□□□□□ -0.61
SSU72-202ENST00000359060 PRSS55Q6UWB4 352 aaPredicted RBP11.24□□□□□ -0.61
SSU72-202ENST00000359060 MAPK15Q8TD08 544 aa11.24□□□□□ -0.61
SSU72-202ENST00000359060 DIS3LQ8TF46 1054 aaKnown RBP11.24□□□□□ -0.61
SSU72-202ENST00000359060 PDP2Q9P2J9 529 aa11.24□□□□□ -0.61
SSU72-202ENST00000359060 APPL1Q9UKG1 709 aa11.24□□□□□ -0.61
SSU72-202ENST00000359060 TRAF6Q9Y4K3 522 aa11.24□□□□□ -0.61
SSU72-202ENST00000359060 AK5Q9Y6K8 562 aa11.24□□□□□ -0.61
SSU72-202ENST00000359060 TRIP12Q14669 1992 aaPredicted RBP11.24□□□□□ -0.61
SSU72-202ENST00000359060 MAFKO60675 156 aa11.24□□□□□ -0.61
SSU72-202ENST00000359060 ZNF623O75123 536 aa11.24□□□□□ -0.61
SSU72-202ENST00000359060 CKMP06732 381 aa11.24□□□□□ -0.61
SSU72-202ENST00000359060 PEX2P28328 305 aa11.24□□□□□ -0.61
SSU72-202ENST00000359060 PSME3P61289 254 aa11.24□□□□□ -0.61
SSU72-202ENST00000359060 IMPG1Q17R60 797 aa11.24□□□□□ -0.61
SSU72-202ENST00000359060 CST9Q5W186 159 aa11.24□□□□□ -0.61
SSU72-202ENST00000359060 CEP97Q8IW35 865 aa11.24□□□□□ -0.61
SSU72-202ENST00000359060 TTC9BQ8N6N2 239 aa11.24□□□□□ -0.61
SSU72-202ENST00000359060 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.24□□□□□ -0.61
SSU72-202ENST00000359060 CATSPER1Q8NEC5 780 aa11.24□□□□□ -0.61
SSU72-202ENST00000359060 OR4K2Q8NGD2 314 aa11.24□□□□□ -0.61
SSU72-202ENST00000359060 OR13C4Q8NGS5 318 aa11.24□□□□□ -0.61
SSU72-202ENST00000359060 CYP2S1Q96SQ9 504 aa11.24□□□□□ -0.61
SSU72-202ENST00000359060 CCSER2Q9H7U1 834 aa11.24□□□□□ -0.61
SSU72-202ENST00000359060 HMX1Q9NP08 348 aaPredicted RBP11.24□□□□□ -0.61
SSU72-202ENST00000359060 CROTQ9UKG9 612 aa11.24□□□□□ -0.61
SSU72-202ENST00000359060 TLR6Q9Y2C9 796 aa11.24□□□□□ -0.61
SSU72-202ENST00000359060 ARL5AQ9Y689 179 aa11.24□□□□□ -0.61
SSU72-202ENST00000359060 STX16-NPEPL1H3BU86 382 aa11.24□□□□□ -0.61
SSU72-202ENST00000359060 AURKAO14965 403 aa11.24□□□□□ -0.61
SSU72-202ENST00000359060 ALDH1A1P00352 501 aa11.24□□□□□ -0.61
SSU72-202ENST00000359060 ITGAXP20702 1163 aa11.24□□□□□ -0.61
SSU72-202ENST00000359060 KCNQ1P51787 676 aa11.24□□□□□ -0.61
SSU72-202ENST00000359060 KPNA1P52294 538 aaPredicted RBP11.24□□□□□ -0.61
SSU72-202ENST00000359060 RPS24P62847 133 aaKnown RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms