RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 GALCP54803 685 aa9.81□□□□□ -0.84
CHD3-202ENST00000358181 PPP2R2DQ66LE6 453 aa9.81□□□□□ -0.84
CHD3-202ENST00000358181 ZBTB49Q6ZSB9 765 aa9.81□□□□□ -0.84
CHD3-202ENST00000358181 C3orf67Q6ZVT6 689 aa9.81□□□□□ -0.84
CHD3-202ENST00000358181 RNF148Q8N7C7 305 aa9.81□□□□□ -0.84
CHD3-202ENST00000358181 QRFPRQ96P65 431 aa9.81□□□□□ -0.84
CHD3-202ENST00000358181 REV1Q9UBZ9 1251 aa9.81□□□□□ -0.84
CHD3-202ENST00000358181 C1orf167Q5SNV9 1468 aa9.81□□□□□ -0.84
CHD3-202ENST00000358181 G3V2T6 193 aa9.81□□□□□ -0.84
CHD3-202ENST00000358181 KHNYNO15037 678 aaKnown RBP9.81□□□□□ -0.84
CHD3-202ENST00000358181 CYP4B1P13584 511 aa9.81□□□□□ -0.84
CHD3-202ENST00000358181 ENPEPQ07075 957 aa9.81□□□□□ -0.84
CHD3-202ENST00000358181 KBTBD2Q8IY47 623 aa9.81□□□□□ -0.84
CHD3-202ENST00000358181 RASGEF1CQ8N431 466 aa9.81□□□□□ -0.84
CHD3-202ENST00000358181 ZSCAN4Q8NAM6 433 aaPredicted RBP9.81□□□□□ -0.84
CHD3-202ENST00000358181 ZNF527Q8NB42 609 aa9.81□□□□□ -0.84
CHD3-202ENST00000358181 C1orf216Q8TAB5 229 aa9.81□□□□□ -0.84
CHD3-202ENST00000358181 SELENOMQ8WWX9 145 aa9.81□□□□□ -0.84
CHD3-202ENST00000358181 REEP1Q9H902 201 aa9.81□□□□□ -0.84
CHD3-202ENST00000358181 EFCAB1Q9HAE3 211 aa9.81□□□□□ -0.84
CHD3-202ENST00000358181 PHGDHO43175 533 aaKnown RBP9.81□□□□□ -0.84
CHD3-202ENST00000358181 CYP2C8P10632 490 aa9.81□□□□□ -0.84
CHD3-202ENST00000358181 AP2S1P53680 142 aaPredicted RBP9.81□□□□□ -0.84
CHD3-202ENST00000358181 TSPAN5P62079 268 aa9.81□□□□□ -0.84
CHD3-202ENST00000358181 PURAQ00577 322 aaKnown RBP9.81□□□□□ -0.84
CHD3-202ENST00000358181 SP2Q02086 613 aa9.81□□□□□ -0.84
CHD3-202ENST00000358181 PUM1Q14671 1186 aaKnown RBP eCLIP9.81□□□□□ -0.842e-6■□□□□ 10.4
CHD3-202ENST00000358181 SAMD4BQ5PRF9 694 aaKnown RBP9.81□□□□□ -0.84
CHD3-202ENST00000358181 FRMD5Q7Z6J6 570 aa9.81□□□□□ -0.84
CHD3-202ENST00000358181 ZFP28Q8NHY6 868 aa9.81□□□□□ -0.84
CHD3-202ENST00000358181 IL12RB2Q99665 862 aa9.81□□□□□ -0.84
CHD3-202ENST00000358181 FDXACB1Q9BRP7 624 aaPredicted RBP9.81□□□□□ -0.84
CHD3-202ENST00000358181 PRDM4Q9UKN5 801 aa9.81□□□□□ -0.84
CHD3-202ENST00000358181 DRG1Q9Y295 367 aaKnown RBP9.81□□□□□ -0.84
CHD3-202ENST00000358181 TULP4Q9NRJ4 1543 aa9.81□□□□□ -0.84
CHD3-202ENST00000358181 WTIPA6NIX2 430 aaPredicted RBP9.81□□□□□ -0.84
CHD3-202ENST00000358181 SDR42E2A6NKP2 422 aa9.81□□□□□ -0.84
CHD3-202ENST00000358181 COL6A1P12109 1028 aa9.81□□□□□ -0.84
CHD3-202ENST00000358181 CCKBRP32239 447 aa9.81□□□□□ -0.84
CHD3-202ENST00000358181 SLC12A3P55017 1021 aa9.81□□□□□ -0.84
CHD3-202ENST00000358181 ACSM2AQ08AH3 577 aa9.81□□□□□ -0.84
CHD3-202ENST00000358181 ACSM2BQ68CK6 577 aa9.81□□□□□ -0.84
CHD3-202ENST00000358181 SYDE1Q6ZW31 735 aaPredicted RBP9.81□□□□□ -0.84
CHD3-202ENST00000358181 ITFG1Q8TB96 612 aa9.81□□□□□ -0.84
CHD3-202ENST00000358181 SLC25A36Q96CQ1 311 aa9.81□□□□□ -0.84
CHD3-202ENST00000358181 APBA2Q99767 749 aa9.81□□□□□ -0.84
CHD3-202ENST00000358181 PTPN18Q99952 460 aa9.81□□□□□ -0.84
CHD3-202ENST00000358181 CATSPERZQ9NTU4 200 aa9.81□□□□□ -0.84
CHD3-202ENST00000358181 YARS2Q9Y2Z4 477 aaKnown RBP9.81□□□□□ -0.84
CHD3-202ENST00000358181 PNPLA7Q6ZV29 1317 aa9.81□□□□□ -0.84
CHD3-202ENST00000358181 A0A0A6YYK5 440 aaPredicted RBP9.81□□□□□ -0.84
CHD3-202ENST00000358181 NT5C1B-RDH14C9J2C7 533 aa9.81□□□□□ -0.84
CHD3-202ENST00000358181 UBDO15205 165 aa9.81□□□□□ -0.84
CHD3-202ENST00000358181 GAS2O43903 313 aaKnown RBP9.81□□□□□ -0.84
CHD3-202ENST00000358181 GLRA3O75311 464 aa9.81□□□□□ -0.84
CHD3-202ENST00000358181 TPPPO94811 219 aa9.81□□□□□ -0.84
CHD3-202ENST00000358181 MTHFD1P11586 935 aaKnown RBP9.81□□□□□ -0.84
CHD3-202ENST00000358181 DGKEP52429 567 aa9.81□□□□□ -0.84
CHD3-202ENST00000358181 FNBP1LQ5T0N5 605 aa9.81□□□□□ -0.84
CHD3-202ENST00000358181 PIK3R6Q5UE93 754 aa9.81□□□□□ -0.84
CHD3-202ENST00000358181 SDHAF4Q5VUM1 108 aa9.81□□□□□ -0.84
CHD3-202ENST00000358181 LRRC69Q6ZNQ3 347 aa9.81□□□□□ -0.84
CHD3-202ENST00000358181 OFCC1Q8IZS5 231 aa9.81□□□□□ -0.84
CHD3-202ENST00000358181 ASB8Q9H765 288 aa9.81□□□□□ -0.84
CHD3-202ENST00000358181 RMI1Q9H9A7 625 aa9.81□□□□□ -0.84
CHD3-202ENST00000358181 PRMT8Q9NR22 394 aaPredicted RBP9.81□□□□□ -0.84
CHD3-202ENST00000358181 ARHGEF40Q8TER5 1519 aa9.8□□□□□ -0.84
CHD3-202ENST00000358181 EIF1AYO14602 144 aaKnown RBP9.8□□□□□ -0.84
CHD3-202ENST00000358181 IRF6O14896 467 aa9.8□□□□□ -0.84
CHD3-202ENST00000358181 FBXO21O94952 628 aa9.8□□□□□ -0.84
CHD3-202ENST00000358181 CCNDBP1O95273 360 aa9.8□□□□□ -0.84
CHD3-202ENST00000358181 CSF2P04141 144 aa9.8□□□□□ -0.84
CHD3-202ENST00000358181 DUPD1Q68J44 220 aa9.8□□□□□ -0.84
CHD3-202ENST00000358181 SULT1C3Q6IMI6 304 aa9.8□□□□□ -0.84
CHD3-202ENST00000358181 ZCCHC12Q6PEW1 402 aa9.8□□□□□ -0.84
CHD3-202ENST00000358181 SPOCD1Q6ZMY3 1216 aa9.8□□□□□ -0.84
CHD3-202ENST00000358181 FAM126BQ8IXS8 530 aa9.8□□□□□ -0.84
CHD3-202ENST00000358181 CHST13Q8NET6 341 aa9.8□□□□□ -0.84
CHD3-202ENST00000358181 PANX3Q96QZ0 392 aa9.8□□□□□ -0.84
CHD3-202ENST00000358181 ZYG11BQ9C0D3 744 aa9.8□□□□□ -0.84
CHD3-202ENST00000358181 TRMT13Q9NUP7 481 aaKnown RBP9.8□□□□□ -0.84
CHD3-202ENST00000358181 CD84Q9UIB8 345 aa9.8□□□□□ -0.84
CHD3-202ENST00000358181 VPS4AQ9UN37 437 aa9.8□□□□□ -0.84
CHD3-202ENST00000358181 MTF2Q9Y483 593 aaPredicted RBP9.8□□□□□ -0.84
CHD3-202ENST00000358181 DUSP10Q9Y6W6 482 aa9.8□□□□□ -0.84
CHD3-202ENST00000358181 RNF17Q9BXT8 1623 aaKnown RBP9.8□□□□□ -0.84
CHD3-202ENST00000358181 RGSL1A5PLK6 1076 aa9.8□□□□□ -0.84
CHD3-202ENST00000358181 TRIM64CA6NLI5 447 aa9.8□□□□□ -0.84
CHD3-202ENST00000358181 FAM86B1E9PN63 330 aa9.8□□□□□ -0.84
CHD3-202ENST00000358181 J3QRK9 145 aa9.8□□□□□ -0.84
CHD3-202ENST00000358181 TPST2O60704 377 aa9.8□□□□□ -0.84
CHD3-202ENST00000358181 THRAP10827 490 aa9.8□□□□□ -0.84
CHD3-202ENST00000358181 UGT2B15P54855 530 aa9.8□□□□□ -0.84
CHD3-202ENST00000358181 ERVK-21P61565 698 aa9.8□□□□□ -0.84
CHD3-202ENST00000358181 ALX1Q15699 326 aa9.8□□□□□ -0.84
CHD3-202ENST00000358181 NKAPLQ5M9Q1 402 aa9.8□□□□□ -0.84
CHD3-202ENST00000358181 SCIMPQ6UWF3 145 aa9.8□□□□□ -0.84
CHD3-202ENST00000358181 RTL4Q6ZR62 310 aa9.8□□□□□ -0.84
CHD3-202ENST00000358181 OR56A4Q8NGH8 313 aa9.8□□□□□ -0.84
CHD3-202ENST00000358181 FAM151AQ8WW52 585 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms