RNA–Protein interactions for RNA: ENST00000357376.7

RTN4-203, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,110 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-203ENST00000357376 GIMAP2Q9UG22 337 aa6.87□□□□□ -1.31
RTN4-203ENST00000357376 TRMT6Q9UJA5 497 aaKnown RBP6.87□□□□□ -1.31
RTN4-203ENST00000357376 TCAF1Q9Y4C2 921 aa6.87□□□□□ -1.31
RTN4-203ENST00000357376 TLL2Q9Y6L7 1015 aa6.87□□□□□ -1.31
RTN4-203ENST00000357376 A0A087WXM4 84 aa6.87□□□□□ -1.31
RTN4-203ENST00000357376 C9IYK1 514 aa6.87□□□□□ -1.31
RTN4-203ENST00000357376 SCAMP3O14828 347 aaKnown RBP6.87□□□□□ -1.31
RTN4-203ENST00000357376 MYCP01106 439 aaPredicted RBP6.87□□□□□ -1.31
RTN4-203ENST00000357376 LDLRP01130 860 aa6.87□□□□□ -1.31
RTN4-203ENST00000357376 DNAJB2P25686 324 aa6.87□□□□□ -1.31
RTN4-203ENST00000357376 CPOXP36551 454 aa6.87□□□□□ -1.31
RTN4-203ENST00000357376 TBX4P57082 545 aa6.87□□□□□ -1.31
RTN4-203ENST00000357376 GJA9P57773 515 aa6.87□□□□□ -1.31
RTN4-203ENST00000357376 TAF1CQ15572 869 aaPredicted RBP6.87□□□□□ -1.31
RTN4-203ENST00000357376 TIGD2Q4W5G0 525 aa6.87□□□□□ -1.31
RTN4-203ENST00000357376 CES4AQ5XG92 561 aa6.87□□□□□ -1.31
RTN4-203ENST00000357376 RAP1GAP2Q684P5 730 aa6.87□□□□□ -1.31
RTN4-203ENST00000357376 STEAP4Q687X5 459 aa6.87□□□□□ -1.31
RTN4-203ENST00000357376 DCLRE1AQ6PJP8 1040 aa6.87□□□□□ -1.31
RTN4-203ENST00000357376 CCDC81Q6ZN84 652 aa6.87□□□□□ -1.31
RTN4-203ENST00000357376 GPR142Q7Z601 462 aa6.87□□□□□ -1.31
RTN4-203ENST00000357376 FIG4Q92562 907 aa6.87□□□□□ -1.31
RTN4-203ENST00000357376 GFM2Q969S9 779 aaKnown RBP6.87□□□□□ -1.31
RTN4-203ENST00000357376 FAM162AQ96A26 154 aa6.87□□□□□ -1.31
RTN4-203ENST00000357376 C19orf60Q96EN9 201 aa6.87□□□□□ -1.31
RTN4-203ENST00000357376 GPR22Q99680 433 aa6.87□□□□□ -1.31
RTN4-203ENST00000357376 TRIM8Q9BZR9 551 aa6.87□□□□□ -1.31
RTN4-203ENST00000357376 UNC93B1Q9H1C4 597 aa6.87□□□□□ -1.31
RTN4-203ENST00000357376 ZBTB26Q9HCK0 441 aa6.87□□□□□ -1.31
RTN4-203ENST00000357376 RIC8BQ9NVN3 520 aa6.87□□□□□ -1.31
RTN4-203ENST00000357376 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.87□□□□□ -1.319e-9■■■■■ 42.6
RTN4-203ENST00000357376 SBF2Q86WG5 1849 aa6.87□□□□□ -1.31
RTN4-203ENST00000357376 CDK5RAP2Q96SN8 1893 aa6.87□□□□□ -1.31
RTN4-203ENST00000357376 CCDC154A6NI56 674 aa6.86□□□□□ -1.31
RTN4-203ENST00000357376 MYO1GB0I1T2 1018 aa6.86□□□□□ -1.31
RTN4-203ENST00000357376 STX7O15400 261 aaKnown RBP6.86□□□□□ -1.31
RTN4-203ENST00000357376 SYNCRIPO60506 623 aaKnown RBP6.86□□□□□ -1.31
RTN4-203ENST00000357376 SIX3O95343 332 aaPredicted RBP6.86□□□□□ -1.31
RTN4-203ENST00000357376 GUCA1CO95843 209 aa6.86□□□□□ -1.31
RTN4-203ENST00000357376 LBPP18428 481 aa6.86□□□□□ -1.31
RTN4-203ENST00000357376 NUP107P57740 925 aa6.86□□□□□ -1.31
RTN4-203ENST00000357376 DSC2Q02487 901 aa6.86□□□□□ -1.31
RTN4-203ENST00000357376 TRAF2Q12933 501 aa6.86□□□□□ -1.31
RTN4-203ENST00000357376 POLD3Q15054 466 aaPredicted RBP6.86□□□□□ -1.31
RTN4-203ENST00000357376 MAPRE1Q15691 268 aaKnown RBP6.86□□□□□ -1.31
RTN4-203ENST00000357376 NOL9Q5SY16 702 aaKnown RBP6.86□□□□□ -1.31
RTN4-203ENST00000357376 ANKS6Q68DC2 871 aa6.86□□□□□ -1.31
RTN4-203ENST00000357376 MAVSQ7Z434 540 aa6.86□□□□□ -1.31
RTN4-203ENST00000357376 TMEM86AQ8N2M4 240 aa6.86□□□□□ -1.31
RTN4-203ENST00000357376 TXNDC5Q8NBS9 432 aaKnown RBP6.86□□□□□ -1.31
RTN4-203ENST00000357376 ZFAND2BQ8WV99 257 aa6.86□□□□□ -1.31
RTN4-203ENST00000357376 CANT1Q8WVQ1 401 aa6.86□□□□□ -1.31
RTN4-203ENST00000357376 ESAMQ96AP7 390 aa6.86□□□□□ -1.31
RTN4-203ENST00000357376 TBATAQ96M53 351 aa6.86□□□□□ -1.31
RTN4-203ENST00000357376 ZNF512Q96ME7 567 aaPredicted RBP6.86□□□□□ -1.31
RTN4-203ENST00000357376 NSMCE2Q96MF7 247 aa6.86□□□□□ -1.31
RTN4-203ENST00000357376 CAMKK2Q96RR4 588 aa6.86□□□□□ -1.31
RTN4-203ENST00000357376 TCF12Q99081 682 aa6.86□□□□□ -1.31
RTN4-203ENST00000357376 SEMA3CQ99985 751 aa6.86□□□□□ -1.31
RTN4-203ENST00000357376 MLPHQ9BV36 600 aaPredicted RBP6.86□□□□□ -1.31
RTN4-203ENST00000357376 NFKBIZQ9BYH8 718 aa6.86□□□□□ -1.31
RTN4-203ENST00000357376 SLC39A8Q9C0K1 460 aa6.86□□□□□ -1.31
RTN4-203ENST00000357376 CLK4Q9HAZ1 481 aaKnown RBP6.86□□□□□ -1.31
RTN4-203ENST00000357376 CASS4Q9NQ75 786 aa6.86□□□□□ -1.31
RTN4-203ENST00000357376 PTTG2Q9NZH5 202 aa6.86□□□□□ -1.31
RTN4-203ENST00000357376 CDH9Q9ULB4 789 aa6.86□□□□□ -1.31
RTN4-203ENST00000357376 ST3GAL5Q9UNP4 418 aa6.86□□□□□ -1.31
RTN4-203ENST00000357376 ASB3Q9Y575 518 aa6.86□□□□□ -1.31
RTN4-203ENST00000357376 C1orf232A0A0U1RR37 186 aa6.86□□□□□ -1.31
RTN4-203ENST00000357376 ALDH1A2O94788 518 aa6.86□□□□□ -1.31
RTN4-203ENST00000357376 NCK1P16333 377 aa6.86□□□□□ -1.31
RTN4-203ENST00000357376 MS4A2Q01362 244 aa6.86□□□□□ -1.31
RTN4-203ENST00000357376 CHRNB3Q05901 458 aa6.86□□□□□ -1.31
RTN4-203ENST00000357376 PAFAH1B3Q15102 231 aaKnown RBP6.86□□□□□ -1.31
RTN4-203ENST00000357376 SLC44A4Q53GD3 710 aa6.86□□□□□ -1.31
RTN4-203ENST00000357376 IQSEC1Q6DN90 963 aa6.86□□□□□ -1.31
RTN4-203ENST00000357376 PTRHD1Q6GMV3 140 aaKnown RBP6.86□□□□□ -1.31
RTN4-203ENST00000357376 KIAA1841Q6NSI8 718 aa6.86□□□□□ -1.31
RTN4-203ENST00000357376 CXCL17Q6UXB2 119 aa6.86□□□□□ -1.31
RTN4-203ENST00000357376 CYP4V2Q6ZWL3 525 aaPredicted RBP6.86□□□□□ -1.31
RTN4-203ENST00000357376 PIM3Q86V86 326 aa6.86□□□□□ -1.31
RTN4-203ENST00000357376 C2orf69Q8N8R5 385 aa6.86□□□□□ -1.31
RTN4-203ENST00000357376 ATP6V0D2Q8N8Y2 350 aa6.86□□□□□ -1.31
RTN4-203ENST00000357376 DDHD1Q8NEL9 900 aa6.86□□□□□ -1.31
RTN4-203ENST00000357376 ZNF555Q8NEP9 628 aa6.86□□□□□ -1.31
RTN4-203ENST00000357376 TNIP2Q8NFZ5 429 aa6.86□□□□□ -1.31
RTN4-203ENST00000357376 TBCDQ9BTW9 1192 aa6.86□□□□□ -1.31
RTN4-203ENST00000357376 C9orf16Q9BUW7 83 aa6.86□□□□□ -1.31
RTN4-203ENST00000357376 CINPQ9BW66 212 aaPredicted RBP6.86□□□□□ -1.31
RTN4-203ENST00000357376 MUC3BQ9H195 1237 aa6.86□□□□□ -1.31
RTN4-203ENST00000357376 ABCC13Q9NSE7 274 aa6.86□□□□□ -1.31
RTN4-203ENST00000357376 FAM105AQ9NUU6 356 aa6.86□□□□□ -1.31
RTN4-203ENST00000357376 PGAP2Q9UHJ9 254 aa6.86□□□□□ -1.31
RTN4-203ENST00000357376 PKP3Q9Y446 797 aa6.86□□□□□ -1.31
RTN4-203ENST00000357376 SLC30A1Q9Y6M5 507 aa6.86□□□□□ -1.31
RTN4-203ENST00000357376 PTGES3LE9PB15 166 aa6.86□□□□□ -1.31
RTN4-203ENST00000357376 G3V2L1 256 aa6.86□□□□□ -1.31
RTN4-203ENST00000357376 FZD9O00144 591 aa6.86□□□□□ -1.31
RTN4-203ENST00000357376 AZIN1O14977 448 aa6.86□□□□□ -1.31
RTN4-203ENST00000357376 TBC1D4O60343 1298 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms