RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 NR1D1P20393 614 aa18.27■□□□□ 0.52
SMARCD3-202ENST00000356800 ADRA1DP25100 572 aa18.27■□□□□ 0.52
SMARCD3-202ENST00000356800 FRG1Q14331 258 aaKnown RBP18.27■□□□□ 0.52
SMARCD3-202ENST00000356800 ZNF449Q6P9G9 518 aa18.27■□□□□ 0.52
SMARCD3-202ENST00000356800 ADGRD1Q6QNK2 874 aa18.27■□□□□ 0.52
SMARCD3-202ENST00000356800 PLPP6Q8IY26 295 aa18.27■□□□□ 0.52
SMARCD3-202ENST00000356800 SLC44A3Q8N4M1 653 aa18.27■□□□□ 0.52
SMARCD3-202ENST00000356800 ZNF366Q8N895 744 aa18.27■□□□□ 0.52
SMARCD3-202ENST00000356800 PPHLN1Q8NEY8 458 aaKnown RBP18.27■□□□□ 0.52
SMARCD3-202ENST00000356800 PDCD6IPQ8WUM4 868 aaKnown RBP18.27■□□□□ 0.52
SMARCD3-202ENST00000356800 PTCD2Q8WV60 388 aaKnown RBP18.27■□□□□ 0.52
SMARCD3-202ENST00000356800 MRM3Q9HC36 420 aaKnown RBP18.27■□□□□ 0.52
SMARCD3-202ENST00000356800 IL1RAPL1Q9NZN1 696 aa18.27■□□□□ 0.52
SMARCD3-202ENST00000356800 PSMC3IPQ9P2W1 217 aaPredicted RBP18.27■□□□□ 0.52
SMARCD3-202ENST00000356800 CTNNAL1Q9UBT7 734 aa18.27■□□□□ 0.52
SMARCD3-202ENST00000356800 SLC2A6Q9UGQ3 507 aa18.27■□□□□ 0.52
SMARCD3-202ENST00000356800 ADAM21Q9UKJ8 722 aa18.27■□□□□ 0.52
SMARCD3-202ENST00000356800 PCDHB9Q9Y5E1 797 aa18.27■□□□□ 0.52
SMARCD3-202ENST00000356800 SPO11Q9Y5K1 396 aa18.27■□□□□ 0.52
SMARCD3-202ENST00000356800 FAM169AQ9Y6X4 670 aa18.27■□□□□ 0.52
SMARCD3-202ENST00000356800 TBC1D3BA6NDS4 549 aa18.26■□□□□ 0.51
SMARCD3-202ENST00000356800 FAM159BA6NKW6 160 aa18.26■□□□□ 0.51
SMARCD3-202ENST00000356800 SOCS5O75159 536 aa18.26■□□□□ 0.51
SMARCD3-202ENST00000356800 NNMTP40261 264 aa18.26■□□□□ 0.51
SMARCD3-202ENST00000356800 GYS2P54840 703 aa18.26■□□□□ 0.51
SMARCD3-202ENST00000356800 BCL2L1Q07817 233 aa18.26■□□□□ 0.51
SMARCD3-202ENST00000356800 SEPT6Q14141 434 aa18.26■□□□□ 0.51
SMARCD3-202ENST00000356800 PTPRRQ15256 657 aa18.26■□□□□ 0.51
SMARCD3-202ENST00000356800 QPCTQ16769 361 aa18.26■□□□□ 0.51
SMARCD3-202ENST00000356800 LEXMQ3ZCV2 418 aa18.26■□□□□ 0.51
SMARCD3-202ENST00000356800 HABP4Q5JVS0 413 aaKnown RBP18.26■□□□□ 0.51
SMARCD3-202ENST00000356800 KDM7AQ6ZMT4 941 aa18.26■□□□□ 0.51
SMARCD3-202ENST00000356800 CSGALNACT1Q8TDX6 532 aa18.26■□□□□ 0.51
SMARCD3-202ENST00000356800 PIH1D2Q8WWB5 315 aa18.26■□□□□ 0.51
SMARCD3-202ENST00000356800 PTPRN2Q92932 1015 aa18.26■□□□□ 0.51
SMARCD3-202ENST00000356800 RMDN1Q96DB5 314 aa18.26■□□□□ 0.51
SMARCD3-202ENST00000356800 PAFAH2Q99487 392 aa18.26■□□□□ 0.51
SMARCD3-202ENST00000356800 CPEB1Q9BZB8 566 aaKnown RBP18.26■□□□□ 0.51
SMARCD3-202ENST00000356800 ATP13A3Q9H7F0 1226 aa18.26■□□□□ 0.51
SMARCD3-202ENST00000356800 TREX1Q9NSU2 369 aa18.26■□□□□ 0.51
SMARCD3-202ENST00000356800 PLA2G4CQ9UP65 541 aa18.26■□□□□ 0.51
SMARCD3-202ENST00000356800 MROH6A6NGR9 719 aa18.25■□□□□ 0.51
SMARCD3-202ENST00000356800 ANKRD66B4E2M5 251 aa18.25■□□□□ 0.51
SMARCD3-202ENST00000356800 WASH3PC4AMC7 463 aa18.25■□□□□ 0.51
SMARCD3-202ENST00000356800 LDB2O43679 373 aa18.25■□□□□ 0.51
SMARCD3-202ENST00000356800 POP4O95707 220 aaKnown RBP18.25■□□□□ 0.51
SMARCD3-202ENST00000356800 CA4P22748 312 aa18.25■□□□□ 0.51
SMARCD3-202ENST00000356800 SLC8A1P32418 973 aa18.25■□□□□ 0.51
SMARCD3-202ENST00000356800 GRIA2P42262 883 aa18.25■□□□□ 0.51
SMARCD3-202ENST00000356800 SMAD1Q15797 465 aaKnown RBP18.25■□□□□ 0.51
SMARCD3-202ENST00000356800 ARMC12Q5T9G4 340 aa18.25■□□□□ 0.51
SMARCD3-202ENST00000356800 ESRP1Q6NXG1 681 aaKnown RBP18.25■□□□□ 0.51
SMARCD3-202ENST00000356800 LRRC6Q86X45 466 aa18.25■□□□□ 0.51
SMARCD3-202ENST00000356800 ZSWIM9Q86XI8 627 aa18.25■□□□□ 0.51
SMARCD3-202ENST00000356800 CYP4X1Q8N118 509 aa18.25■□□□□ 0.51
SMARCD3-202ENST00000356800 PLCD3Q8N3E9 789 aa18.25■□□□□ 0.51
SMARCD3-202ENST00000356800 ARFGAP2Q8N6H7 521 aa18.25■□□□□ 0.51
SMARCD3-202ENST00000356800 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.25■□□□□ 0.51
SMARCD3-202ENST00000356800 BLOC1S5Q8TDH9 187 aa18.25■□□□□ 0.51
SMARCD3-202ENST00000356800 SLC44A1Q8WWI5 657 aa18.25■□□□□ 0.51
SMARCD3-202ENST00000356800 MRRFQ96E11 262 aaKnown RBP18.25■□□□□ 0.51
SMARCD3-202ENST00000356800 TUBGCP5Q96RT8 1024 aa18.25■□□□□ 0.51
SMARCD3-202ENST00000356800 ADGRE3Q9BY15 652 aa18.25■□□□□ 0.51
SMARCD3-202ENST00000356800 ZDHHC6Q9H6R6 413 aa18.25■□□□□ 0.51
SMARCD3-202ENST00000356800 KCTD3Q9Y597 815 aa18.25■□□□□ 0.51
SMARCD3-202ENST00000356800 HEATR9A2RTY3 570 aa18.25■□□□□ 0.51
SMARCD3-202ENST00000356800 ASGR2P07307 311 aa18.25■□□□□ 0.51
SMARCD3-202ENST00000356800 MSH2P43246 934 aa18.25■□□□□ 0.51
SMARCD3-202ENST00000356800 GALK1P51570 392 aa18.25■□□□□ 0.51
SMARCD3-202ENST00000356800 ST8SIA6P61647 398 aa18.25■□□□□ 0.51
SMARCD3-202ENST00000356800 ZNF234Q14588 700 aa18.25■□□□□ 0.51
SMARCD3-202ENST00000356800 FNDC3BQ53EP0 1204 aaKnown RBP18.25■□□□□ 0.51
SMARCD3-202ENST00000356800 TSTD2Q5T7W7 516 aa18.25■□□□□ 0.51
SMARCD3-202ENST00000356800 TXNDC11Q6PKC3 985 aa18.25■□□□□ 0.51
SMARCD3-202ENST00000356800 MICALCLQ6ZW33 695 aa18.25■□□□□ 0.51
SMARCD3-202ENST00000356800 TAOK1Q7L7X3 1001 aa18.25■□□□□ 0.51
SMARCD3-202ENST00000356800 KDM1BQ8NB78 822 aa18.25■□□□□ 0.51
SMARCD3-202ENST00000356800 DCAKDQ8WVC6 231 aa18.25■□□□□ 0.51
SMARCD3-202ENST00000356800 CERS2Q96G23 380 aa18.25■□□□□ 0.51
SMARCD3-202ENST00000356800 TBK1Q9UHD2 729 aa18.25■□□□□ 0.51
SMARCD3-202ENST00000356800 ACTL7BQ9Y614 415 aa18.25■□□□□ 0.51
SMARCD3-202ENST00000356800 AURKAO14965 403 aa18.24■□□□□ 0.51
SMARCD3-202ENST00000356800 UGT1A9O60656 530 aa18.24■□□□□ 0.51
SMARCD3-202ENST00000356800 APODP05090 189 aa18.24■□□□□ 0.51
SMARCD3-202ENST00000356800 ERVK-10P10266 1014 aa18.24■□□□□ 0.51
SMARCD3-202ENST00000356800 HLA-EP13747 358 aa18.24■□□□□ 0.51
SMARCD3-202ENST00000356800 ARNTP27540 789 aa18.24■□□□□ 0.51
SMARCD3-202ENST00000356800 SERPINA4P29622 427 aa18.24■□□□□ 0.51
SMARCD3-202ENST00000356800 SKIDA1Q1XH10 827 aa18.24■□□□□ 0.51
SMARCD3-202ENST00000356800 PTCRAQ6ISU1 281 aaPredicted RBP18.24■□□□□ 0.51
SMARCD3-202ENST00000356800 EXOC3L1Q86VI1 746 aa18.24■□□□□ 0.51
SMARCD3-202ENST00000356800 SLC26A11Q86WA9 606 aa18.24■□□□□ 0.51
SMARCD3-202ENST00000356800 MDGA1Q8NFP4 955 aa18.24■□□□□ 0.51
SMARCD3-202ENST00000356800 BRSK1Q8TDC3 778 aa18.24■□□□□ 0.51
SMARCD3-202ENST00000356800 EZH1Q92800 747 aaPredicted RBP18.24■□□□□ 0.51
SMARCD3-202ENST00000356800 ECHDC3Q96DC8 303 aa18.24■□□□□ 0.51
SMARCD3-202ENST00000356800 TMEM245Q9H330 911 aa18.24■□□□□ 0.51
SMARCD3-202ENST00000356800 SUV39H2Q9H5I1 410 aa18.24■□□□□ 0.51
SMARCD3-202ENST00000356800 UGT1A7Q9HAW7 530 aa18.24■□□□□ 0.51
SMARCD3-202ENST00000356800 UGT1A10Q9HAW8 530 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms