RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 GUSBP11Q6P575 273 aa10.75□□□□□ -0.69
CAPN3-204ENST00000356316 LVRNQ6Q4G3 990 aa10.75□□□□□ -0.69
CAPN3-204ENST00000356316 RBM44Q6ZP01 1051 aaKnown RBP10.75□□□□□ -0.69
CAPN3-204ENST00000356316 SRLQ86TD4 932 aa10.75□□□□□ -0.69
CAPN3-204ENST00000356316 GKN2Q86XP6 184 aa10.75□□□□□ -0.69
CAPN3-204ENST00000356316 CAMK1DQ8IU85 385 aa10.75□□□□□ -0.69
CAPN3-204ENST00000356316 SDR16C5Q8N3Y7 309 aa10.75□□□□□ -0.69
CAPN3-204ENST00000356316 FSTL5Q8N475 847 aaPredicted RBP10.75□□□□□ -0.69
CAPN3-204ENST00000356316 TP53I13Q8NBR0 393 aaPredicted RBP10.75□□□□□ -0.69
CAPN3-204ENST00000356316 NAF1Q96HR8 494 aaKnown RBP10.75□□□□□ -0.69
CAPN3-204ENST00000356316 CELF6Q96J87 481 aaKnown RBP10.75□□□□□ -0.69
CAPN3-204ENST00000356316 CINPQ9BW66 212 aaPredicted RBP10.75□□□□□ -0.69
CAPN3-204ENST00000356316 BOCQ9BWV1 1114 aa10.75□□□□□ -0.69
CAPN3-204ENST00000356316 SLC39A8Q9C0K1 460 aa10.75□□□□□ -0.69
CAPN3-204ENST00000356316 PRORYQ9H606 182 aa10.75□□□□□ -0.69
CAPN3-204ENST00000356316 LRRC19Q9H756 370 aa10.75□□□□□ -0.69
CAPN3-204ENST00000356316 SYNDIG1Q9H7V2 258 aa10.75□□□□□ -0.69
CAPN3-204ENST00000356316 SP110Q9HB58 689 aa10.75□□□□□ -0.69
CAPN3-204ENST00000356316 MRPL47Q9HD33 250 aaKnown RBP10.75□□□□□ -0.69
CAPN3-204ENST00000356316 PCDH12Q9NPG4 1184 aa10.75□□□□□ -0.69
CAPN3-204ENST00000356316 THSD1Q9NS62 852 aa10.75□□□□□ -0.69
CAPN3-204ENST00000356316 LHX3Q9UBR4 397 aa10.75□□□□□ -0.69
CAPN3-204ENST00000356316 PADI4Q9UM07 663 aa10.75□□□□□ -0.69
CAPN3-204ENST00000356316 COQ6Q9Y2Z9 468 aa10.75□□□□□ -0.69
CAPN3-204ENST00000356316 RAI2Q9Y5P3 530 aa10.75□□□□□ -0.69
CAPN3-204ENST00000356316 APC2O95996 2303 aa10.75□□□□□ -0.69
CAPN3-204ENST00000356316 LY6G6EA0A0G2JKS1 128 aa10.74□□□□□ -0.69
CAPN3-204ENST00000356316 TMEM191CA6NGB0 347 aa10.74□□□□□ -0.69
CAPN3-204ENST00000356316 LRRC53A6NM62 1247 aa10.74□□□□□ -0.69
CAPN3-204ENST00000356316 TK2O00142 265 aa10.74□□□□□ -0.69
CAPN3-204ENST00000356316 TEX33O43247 280 aa10.74□□□□□ -0.69
CAPN3-204ENST00000356316 TCEA3O75764 348 aa10.74□□□□□ -0.69
CAPN3-204ENST00000356316 FTLP02792 175 aaPredicted RBP10.74□□□□□ -0.69
CAPN3-204ENST00000356316 GZMAP12544 262 aa10.74□□□□□ -0.69
CAPN3-204ENST00000356316 C6P13671 934 aa10.74□□□□□ -0.69
CAPN3-204ENST00000356316 RENBPP51606 427 aa10.74□□□□□ -0.69
CAPN3-204ENST00000356316 ZNF135P52742 658 aaPredicted RBP10.74□□□□□ -0.69
CAPN3-204ENST00000356316 HK3P52790 923 aa10.74□□□□□ -0.69
CAPN3-204ENST00000356316 UCNP55089 124 aa10.74□□□□□ -0.69
CAPN3-204ENST00000356316 CXADRP78310 365 aa10.74□□□□□ -0.69
CAPN3-204ENST00000356316 OGDHQ02218 1023 aa10.74□□□□□ -0.69
CAPN3-204ENST00000356316 NSUN2Q08J23 767 aaKnown RBP eCLIP10.74□□□□□ -0.69
CAPN3-204ENST00000356316 C19orf57Q0VDD7 668 aa10.74□□□□□ -0.69
CAPN3-204ENST00000356316 NFATC4Q14934 902 aa10.74□□□□□ -0.69
CAPN3-204ENST00000356316 C3orf38Q5JPI3 329 aa10.74□□□□□ -0.69
CAPN3-204ENST00000356316 PLEKHA7Q6IQ23 1121 aa10.74□□□□□ -0.69
CAPN3-204ENST00000356316 FOXR1Q6PIV2 292 aa10.74□□□□□ -0.69
CAPN3-204ENST00000356316 CRTC1Q6UUV9 634 aa10.74□□□□□ -0.69
CAPN3-204ENST00000356316 RFX8Q6ZV50 586 aa10.74□□□□□ -0.69
CAPN3-204ENST00000356316 APTXQ7Z2E3 356 aaKnown RBP10.74□□□□□ -0.69
CAPN3-204ENST00000356316 PSTKQ8IV42 348 aaKnown RBP10.74□□□□□ -0.69
CAPN3-204ENST00000356316 SPACA3Q8IXA5 215 aa10.74□□□□□ -0.69
CAPN3-204ENST00000356316 ARL14Q8N4G2 192 aa10.74□□□□□ -0.69
CAPN3-204ENST00000356316 TSEN2Q8NCE0 465 aaKnown RBP10.74□□□□□ -0.69
CAPN3-204ENST00000356316 TSACCQ96A04 125 aaPredicted RBP10.74□□□□□ -0.69
CAPN3-204ENST00000356316 VOPP1Q96AW1 172 aa10.74□□□□□ -0.69
CAPN3-204ENST00000356316 TRIM11Q96F44 468 aa10.74□□□□□ -0.69
CAPN3-204ENST00000356316 CCDC97Q96F63 343 aaPredicted RBP10.74□□□□□ -0.69
CAPN3-204ENST00000356316 APOOQ9BUR5 198 aa10.74□□□□□ -0.69
CAPN3-204ENST00000356316 LRRC61Q9BV99 259 aa10.74□□□□□ -0.69
CAPN3-204ENST00000356316 DPH1Q9BZG8 443 aa10.74□□□□□ -0.69
CAPN3-204ENST00000356316 EDEM3Q9BZQ6 932 aa10.74□□□□□ -0.69
CAPN3-204ENST00000356316 TCEAL2Q9H3H9 227 aaPredicted RBP10.74□□□□□ -0.69
CAPN3-204ENST00000356316 HAUS4Q9H6D7 363 aa10.74□□□□□ -0.69
CAPN3-204ENST00000356316 ZWILCHQ9H900 591 aa10.74□□□□□ -0.69
CAPN3-204ENST00000356316 GPATCH2LQ9NWQ4 482 aa10.74□□□□□ -0.69
CAPN3-204ENST00000356316 TAS2R14Q9NYV8 317 aa10.74□□□□□ -0.69
CAPN3-204ENST00000356316 SATB2Q9UPW6 733 aa10.74□□□□□ -0.69
CAPN3-204ENST00000356316 SCINQ9Y6U3 715 aa10.74□□□□□ -0.69
CAPN3-204ENST00000356316 U3KQA8 63 aa10.74□□□□□ -0.69
CAPN3-204ENST00000356316 TEX51A0A1B0GUA7 166 aa10.73□□□□□ -0.69
CAPN3-204ENST00000356316 TSPAN11A1L157 253 aa10.73□□□□□ -0.69
CAPN3-204ENST00000356316 CFAP69A5D8W1 941 aa10.73□□□□□ -0.69
CAPN3-204ENST00000356316 TMX2-CTNND1H3BSU7 103 aa10.73□□□□□ -0.69
CAPN3-204ENST00000356316 CACNB4O00305 520 aaPredicted RBP10.73□□□□□ -0.69
CAPN3-204ENST00000356316 KLK10O43240 276 aa10.73□□□□□ -0.69
CAPN3-204ENST00000356316 BUB1BO60566 1050 aaPredicted RBP10.73□□□□□ -0.69
CAPN3-204ENST00000356316 DXOO77932 396 aaKnown RBP10.73□□□□□ -0.69
CAPN3-204ENST00000356316 SERPINC1P01008 464 aa10.73□□□□□ -0.69
CAPN3-204ENST00000356316 PCCBP05166 539 aa10.73□□□□□ -0.69
CAPN3-204ENST00000356316 ERCC2P18074 760 aa10.73□□□□□ -0.69
CAPN3-204ENST00000356316 KELP23276 732 aa10.73□□□□□ -0.69
CAPN3-204ENST00000356316 NFKBIAP25963 317 aa10.73□□□□□ -0.69
CAPN3-204ENST00000356316 MIPP30301 263 aa10.73□□□□□ -0.69
CAPN3-204ENST00000356316 HCAR3P49019 387 aa10.73□□□□□ -0.69
CAPN3-204ENST00000356316 SCNN1BP51168 640 aa10.73□□□□□ -0.69
CAPN3-204ENST00000356316 TMPRSS3P57727 454 aa10.73□□□□□ -0.69
CAPN3-204ENST00000356316 SRP54P61011 504 aaKnown RBP10.73□□□□□ -0.69
CAPN3-204ENST00000356316 TLE3Q04726 772 aa10.73□□□□□ -0.69
CAPN3-204ENST00000356316 IL10RBQ08334 325 aa10.73□□□□□ -0.69
CAPN3-204ENST00000356316 KLHL30Q0D2K2 578 aa10.73□□□□□ -0.69
CAPN3-204ENST00000356316 SPIDRQ14159 915 aa10.73□□□□□ -0.69
CAPN3-204ENST00000356316 WSCD2Q2TBF2 565 aa10.73□□□□□ -0.69
CAPN3-204ENST00000356316 ANO6Q4KMQ2 910 aa10.73□□□□□ -0.69
CAPN3-204ENST00000356316 SLC35F3Q8IY50 421 aa10.73□□□□□ -0.69
CAPN3-204ENST00000356316 LZTR1Q8N653 840 aa10.73□□□□□ -0.69
CAPN3-204ENST00000356316 ARL10Q8N8L6 244 aa10.73□□□□□ -0.69
CAPN3-204ENST00000356316 LSM14AQ8ND56 463 aaKnown RBP10.73□□□□□ -0.69
CAPN3-204ENST00000356316 OR6C4Q8NGE1 309 aa10.73□□□□□ -0.69
CAPN3-204ENST00000356316 KCNE4Q8WWG9 221 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms