RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 NTN4Q9HB63 628 aa10.72□□□□□ -0.69
CAPN3-203ENST00000349748 MCCC2Q9HCC0 563 aa10.72□□□□□ -0.69
CAPN3-203ENST00000349748 PCDHB4Q9Y5E5 795 aa10.72□□□□□ -0.69
CAPN3-203ENST00000349748 NOS1APO75052 506 aaPredicted RBP10.71□□□□□ -0.69
CAPN3-203ENST00000349748 HTR1AP08908 422 aa10.71□□□□□ -0.69
CAPN3-203ENST00000349748 TSHRP16473 764 aa10.71□□□□□ -0.69
CAPN3-203ENST00000349748 ATP6V1B2P21281 511 aa10.71□□□□□ -0.69
CAPN3-203ENST00000349748 MPSTP25325 297 aa10.71□□□□□ -0.69
CAPN3-203ENST00000349748 IL12AP29459 219 aa10.71□□□□□ -0.69
CAPN3-203ENST00000349748 DSG3P32926 999 aa10.71□□□□□ -0.69
CAPN3-203ENST00000349748 NSFP46459 744 aaKnown RBP10.71□□□□□ -0.69
CAPN3-203ENST00000349748 DBPQ10586 325 aaPredicted RBP10.71□□□□□ -0.69
CAPN3-203ENST00000349748 MAMLD1Q13495 774 aa10.71□□□□□ -0.69
CAPN3-203ENST00000349748 DGUOKQ16854 277 aa10.71□□□□□ -0.69
CAPN3-203ENST00000349748 ESCO2Q56NI9 601 aa10.71□□□□□ -0.69
CAPN3-203ENST00000349748 INTS11Q5TA45 600 aaKnown RBP10.71□□□□□ -0.69
CAPN3-203ENST00000349748 NDUFAF5Q5TEU4 345 aa10.71□□□□□ -0.69
CAPN3-203ENST00000349748 ZNF544Q6NX49 715 aa10.71□□□□□ -0.69
CAPN3-203ENST00000349748 ANKRD13AQ8IZ07 590 aa10.71□□□□□ -0.69
CAPN3-203ENST00000349748 PNPT1Q8TCS8 783 aaKnown RBP10.71□□□□□ -0.69
CAPN3-203ENST00000349748 POMGNT1Q8WZA1 660 aa10.71□□□□□ -0.69
CAPN3-203ENST00000349748 TBATAQ96M53 351 aa10.71□□□□□ -0.69
CAPN3-203ENST00000349748 ING2Q9H160 280 aa10.71□□□□□ -0.69
CAPN3-203ENST00000349748 ACOXLQ9NUZ1 547 aa10.71□□□□□ -0.69
CAPN3-203ENST00000349748 TEKT2Q9UIF3 430 aa10.71□□□□□ -0.69
CAPN3-203ENST00000349748 NUP50Q9UKX7 468 aa10.71□□□□□ -0.69
CAPN3-203ENST00000349748 CDY2AQ9Y6F7 541 aa10.71□□□□□ -0.69
CAPN3-203ENST00000349748 CDY1Q9Y6F8 540 aa10.71□□□□□ -0.69
CAPN3-203ENST00000349748 HEATR9A2RTY3 570 aa10.71□□□□□ -0.69
CAPN3-203ENST00000349748 LEUTXA8MZ59 168 aa10.71□□□□□ -0.69
CAPN3-203ENST00000349748 F8VP50 259 aa10.71□□□□□ -0.69
CAPN3-203ENST00000349748 TPP1O14773 563 aa10.71□□□□□ -0.69
CAPN3-203ENST00000349748 PDPK1O15530 556 aa10.71□□□□□ -0.69
CAPN3-203ENST00000349748 EXTL3O43909 919 aa10.71□□□□□ -0.69
CAPN3-203ENST00000349748 RAD17O75943 681 aa10.71□□□□□ -0.69
CAPN3-203ENST00000349748 JUNP05412 331 aaKnown RBP10.71□□□□□ -0.69
CAPN3-203ENST00000349748 CHRNGP07510 517 aa10.71□□□□□ -0.69
CAPN3-203ENST00000349748 CLEC2LP0C7M8 214 aa10.71□□□□□ -0.69
CAPN3-203ENST00000349748 PSKH1P11801 424 aa10.71□□□□□ -0.69
CAPN3-203ENST00000349748 AXLP30530 894 aa10.71□□□□□ -0.69
CAPN3-203ENST00000349748 MFAP3P55082 362 aa10.71□□□□□ -0.69
CAPN3-203ENST00000349748 NCS1P62166 190 aa10.71□□□□□ -0.69
CAPN3-203ENST00000349748 YWHAZP63104 245 aaKnown RBP10.71□□□□□ -0.69
CAPN3-203ENST00000349748 DPYSL3Q14195 570 aa10.71□□□□□ -0.69
CAPN3-203ENST00000349748 ZMYND11Q15326 602 aa10.71□□□□□ -0.69
CAPN3-203ENST00000349748 TBRG1Q3YBR2 411 aa10.71□□□□□ -0.69
CAPN3-203ENST00000349748 SYTL1Q8IYJ3 562 aa10.71□□□□□ -0.69
CAPN3-203ENST00000349748 CCDC185Q8N715 623 aa10.71□□□□□ -0.69
CAPN3-203ENST00000349748 PROX1Q92786 737 aa10.71□□□□□ -0.69
CAPN3-203ENST00000349748 BTN2A3PQ96KV6 586 aa10.71□□□□□ -0.69
CAPN3-203ENST00000349748 RPL10LQ96L21 214 aaKnown RBP10.71□□□□□ -0.69
CAPN3-203ENST00000349748 FYTTD1Q96QD9 318 aaKnown RBP10.71□□□□□ -0.69
CAPN3-203ENST00000349748 GDF15Q99988 308 aa10.71□□□□□ -0.69
CAPN3-203ENST00000349748 REXO4Q9GZR2 422 aaKnown RBP10.71□□□□□ -0.69
CAPN3-203ENST00000349748 CD320Q9NPF0 282 aa10.71□□□□□ -0.69
CAPN3-203ENST00000349748 CHRAC1Q9NRG0 131 aa10.71□□□□□ -0.69
CAPN3-203ENST00000349748 SMPD3Q9NY59 655 aaPredicted RBP10.71□□□□□ -0.69
CAPN3-203ENST00000349748 ANKRD31Q8N7Z5 1873 aa10.71□□□□□ -0.7
CAPN3-203ENST00000349748 ISPDA4D126 451 aa10.71□□□□□ -0.7
CAPN3-203ENST00000349748 OR5K4A6NMS3 321 aa10.71□□□□□ -0.7
CAPN3-203ENST00000349748 MT-ND1P03886 318 aa10.71□□□□□ -0.7
CAPN3-203ENST00000349748 ALDOAP04075 364 aaKnown RBP10.71□□□□□ -0.7
CAPN3-203ENST00000349748 PGRP06401 933 aa10.71□□□□□ -0.7
CAPN3-203ENST00000349748 PCNAP12004 261 aa10.71□□□□□ -0.7
CAPN3-203ENST00000349748 YBX3P16989 372 aaKnown RBP eCLIP10.71□□□□□ -0.7
CAPN3-203ENST00000349748 ALOX12P18054 663 aa10.71□□□□□ -0.7
CAPN3-203ENST00000349748 CD68P34810 354 aaPredicted RBP10.71□□□□□ -0.7
CAPN3-203ENST00000349748 ABCG1P45844 678 aa10.71□□□□□ -0.7
CAPN3-203ENST00000349748 ARHGDIAP52565 204 aa10.71□□□□□ -0.7
CAPN3-203ENST00000349748 GP2P55259 537 aaKnown RBP10.71□□□□□ -0.7
CAPN3-203ENST00000349748 EIF6P56537 245 aaKnown RBP10.71□□□□□ -0.7
CAPN3-203ENST00000349748 SMTNL2Q2TAL5 461 aa10.71□□□□□ -0.7
CAPN3-203ENST00000349748 PTPN20Q4JDL3 420 aa10.71□□□□□ -0.7
CAPN3-203ENST00000349748 PM20D1Q6GTS8 502 aa10.71□□□□□ -0.7
CAPN3-203ENST00000349748 SLC9A9Q8IVB4 645 aa10.71□□□□□ -0.7
CAPN3-203ENST00000349748 DDIASQ8IXT1 998 aa10.71□□□□□ -0.7
CAPN3-203ENST00000349748 CMTR2Q8IYT2 770 aaKnown RBP10.71□□□□□ -0.7
CAPN3-203ENST00000349748 CLYBLQ8N0X4 340 aa10.71□□□□□ -0.7
CAPN3-203ENST00000349748 PACRGLQ8N7B6 248 aa10.71□□□□□ -0.7
CAPN3-203ENST00000349748 BCL7CQ8WUZ0 217 aaPredicted RBP10.71□□□□□ -0.7
CAPN3-203ENST00000349748 NXNL1Q96CM4 212 aa10.71□□□□□ -0.7
CAPN3-203ENST00000349748 RNF170Q96K19 258 aa10.71□□□□□ -0.7
CAPN3-203ENST00000349748 LTB4R2Q9NPC1 389 aa10.71□□□□□ -0.7
CAPN3-203ENST00000349748 DPP3Q9NY33 737 aa10.71□□□□□ -0.7
CAPN3-203ENST00000349748 ATP6V1HQ9UI12 483 aa10.71□□□□□ -0.7
CAPN3-203ENST00000349748 VWA7Q9Y334 891 aa10.71□□□□□ -0.7
CAPN3-203ENST00000349748 AGRPO00253 132 aa10.7□□□□□ -0.7
CAPN3-203ENST00000349748 PPP1R11O60927 126 aaPredicted RBP10.7□□□□□ -0.7
CAPN3-203ENST00000349748 PRKD3O94806 890 aa10.7□□□□□ -0.7
CAPN3-203ENST00000349748 PTTG1O95997 202 aa10.7□□□□□ -0.7
CAPN3-203ENST00000349748 GSTM2P28161 218 aa10.7□□□□□ -0.7
CAPN3-203ENST00000349748 KRT20P35900 424 aa10.7□□□□□ -0.7
CAPN3-203ENST00000349748 CDKN2BP42772 138 aa10.7□□□□□ -0.7
CAPN3-203ENST00000349748 TGFB2P61812 414 aa10.7□□□□□ -0.7
CAPN3-203ENST00000349748 TFDP3Q5H9I0 405 aa10.7□□□□□ -0.7
CAPN3-203ENST00000349748 C16orf86Q6ZW13 317 aa10.7□□□□□ -0.7
CAPN3-203ENST00000349748 DHFR2Q86XF0 187 aa10.7□□□□□ -0.7
CAPN3-203ENST00000349748 OR13J1Q8NGT2 312 aa10.7□□□□□ -0.7
CAPN3-203ENST00000349748 OR10Z1Q8NGY1 313 aa10.7□□□□□ -0.7
CAPN3-203ENST00000349748 LHFPL5Q8TAF8 219 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms