RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 PPP2R1BP30154 601 aa16.48■□□□□ 0.23
SMARCA4-201ENST00000344626 TLX1P31314 330 aaPredicted RBP16.48■□□□□ 0.23
SMARCA4-201ENST00000344626 NOVP48745 357 aa16.48■□□□□ 0.23
SMARCA4-201ENST00000344626 IRF8Q02556 426 aa16.48■□□□□ 0.23
SMARCA4-201ENST00000344626 OVGP1Q12889 678 aa16.48■□□□□ 0.23
SMARCA4-201ENST00000344626 MMAAQ8IVH4 418 aaKnown RBP16.48■□□□□ 0.23
SMARCA4-201ENST00000344626 PRELID2Q8N945 189 aa16.48■□□□□ 0.23
SMARCA4-201ENST00000344626 CLIC5Q9NZA1 410 aa16.48■□□□□ 0.23
SMARCA4-201ENST00000344626 RPS6KB2Q9UBS0 482 aa16.48■□□□□ 0.23
SMARCA4-201ENST00000344626 SNX10Q9Y5X0 201 aa16.48■□□□□ 0.23
SMARCA4-201ENST00000344626 SH3BGRLO75368 114 aa16.48■□□□□ 0.23
SMARCA4-201ENST00000344626 PTP4A2Q12974 167 aa16.48■□□□□ 0.23
SMARCA4-201ENST00000344626 CYP4X1Q8N118 509 aa16.48■□□□□ 0.23
SMARCA4-201ENST00000344626 DEFB119Q8N690 84 aa16.48■□□□□ 0.23
SMARCA4-201ENST00000344626 TRPV1Q8NER1 839 aa16.48■□□□□ 0.23
SMARCA4-201ENST00000344626 PTCD2Q8WV60 388 aaKnown RBP16.48■□□□□ 0.23
SMARCA4-201ENST00000344626 RHBGQ9H310 441 aa16.48■□□□□ 0.23
SMARCA4-201ENST00000344626 MAPRE3Q9UPY8 281 aa16.48■□□□□ 0.23
SMARCA4-201ENST00000344626 ADAMTS4O75173 837 aa16.48■□□□□ 0.23
SMARCA4-201ENST00000344626 CNPP09543 421 aaKnown RBP16.48■□□□□ 0.23
SMARCA4-201ENST00000344626 BGNP21810 368 aa16.48■□□□□ 0.23
SMARCA4-201ENST00000344626 CCR3P51677 355 aa16.48■□□□□ 0.23
SMARCA4-201ENST00000344626 TMEM259Q4ZIN3 620 aa16.48■□□□□ 0.23
SMARCA4-201ENST00000344626 ADGRF1Q5T601 910 aa16.48■□□□□ 0.23
SMARCA4-201ENST00000344626 ADAMTSL2Q86TH1 951 aa16.48■□□□□ 0.23
SMARCA4-201ENST00000344626 ADAM7Q9H2U9 754 aa16.48■□□□□ 0.23
SMARCA4-201ENST00000344626 SLC1A6P48664 564 aa16.48■□□□□ 0.23
SMARCA4-201ENST00000344626 USP39Q53GS9 565 aaKnown RBP16.48■□□□□ 0.23
SMARCA4-201ENST00000344626 MBLAC2Q68D91 279 aa16.48■□□□□ 0.23
SMARCA4-201ENST00000344626 FAM151BQ6UXP7 276 aa16.48■□□□□ 0.23
SMARCA4-201ENST00000344626 NRSN1Q8IZ57 195 aa16.48■□□□□ 0.23
SMARCA4-201ENST00000344626 PHOSPHO2Q8TCD6 241 aa16.48■□□□□ 0.23
SMARCA4-201ENST00000344626 FERD3LQ96RJ6 166 aa16.48■□□□□ 0.23
SMARCA4-201ENST00000344626 PAAF1Q9BRP4 392 aa16.48■□□□□ 0.23
SMARCA4-201ENST00000344626 SIKE1Q9BRV8 207 aa16.48■□□□□ 0.23
SMARCA4-201ENST00000344626 H2AFY2Q9P0M6 372 aaPredicted RBP16.48■□□□□ 0.23
SMARCA4-201ENST00000344626 GGT7Q9UJ14 662 aa16.48■□□□□ 0.23
SMARCA4-201ENST00000344626 BAZ2AQ9UIF9 1905 aaKnown RBP16.47■□□□□ 0.23
SMARCA4-201ENST00000344626 MYH14Q7Z406 1995 aaKnown RBP16.47■□□□□ 0.23
SMARCA4-201ENST00000344626 MATN3O15232 486 aa16.47■□□□□ 0.23
SMARCA4-201ENST00000344626 SGTAO43765 313 aa16.47■□□□□ 0.23
SMARCA4-201ENST00000344626 GPR32O75388 356 aa16.47■□□□□ 0.23
SMARCA4-201ENST00000344626 CCNDBP1O95273 360 aa16.47■□□□□ 0.23
SMARCA4-201ENST00000344626 KCNQ1P51787 676 aa16.47■□□□□ 0.23
SMARCA4-201ENST00000344626 DRG2P55039 364 aaKnown RBP16.47■□□□□ 0.23
SMARCA4-201ENST00000344626 ATP6V0D1P61421 351 aa16.47■□□□□ 0.23
SMARCA4-201ENST00000344626 RFTN1Q14699 578 aaPredicted RBP16.47■□□□□ 0.23
SMARCA4-201ENST00000344626 ST13P4Q8IZP2 240 aaPredicted RBP16.47■□□□□ 0.23
SMARCA4-201ENST00000344626 ZNF398Q8TD17 642 aa16.47■□□□□ 0.23
SMARCA4-201ENST00000344626 ZNF516Q92618 1163 aa16.47■□□□□ 0.23
SMARCA4-201ENST00000344626 DACT3Q96B18 629 aaPredicted RBP16.47■□□□□ 0.23
SMARCA4-201ENST00000344626 FZD10Q9ULW2 581 aa16.47■□□□□ 0.23
SMARCA4-201ENST00000344626 ASF1AQ9Y294 204 aa16.47■□□□□ 0.23
SMARCA4-201ENST00000344626 GLYATL1P3A0A0U1RQE8 302 aa16.47■□□□□ 0.23
SMARCA4-201ENST00000344626 MFSD11O43934 449 aa16.47■□□□□ 0.23
SMARCA4-201ENST00000344626 SEC22BO75396 215 aa16.47■□□□□ 0.23
SMARCA4-201ENST00000344626 HAPLN1P10915 354 aaPredicted RBP16.47■□□□□ 0.23
SMARCA4-201ENST00000344626 CST5P28325 142 aaPredicted RBP16.47■□□□□ 0.23
SMARCA4-201ENST00000344626 NFYCQ13952 458 aa16.47■□□□□ 0.23
SMARCA4-201ENST00000344626 FAM126BQ8IXS8 530 aa16.47■□□□□ 0.23
SMARCA4-201ENST00000344626 RAVER1Q8IY67 606 aaKnown RBP16.47■□□□□ 0.23
SMARCA4-201ENST00000344626 ANKRD7Q92527 254 aa16.47■□□□□ 0.23
SMARCA4-201ENST00000344626 HLA-CQ95604 372 aa16.47■□□□□ 0.23
SMARCA4-201ENST00000344626 THTPAQ9BU02 230 aa16.47■□□□□ 0.23
SMARCA4-201ENST00000344626 POMKQ9H5K3 350 aa16.47■□□□□ 0.23
SMARCA4-201ENST00000344626 SH3BP4Q9P0V3 963 aa16.47■□□□□ 0.23
SMARCA4-201ENST00000344626 PSME2Q9UL46 239 aa16.47■□□□□ 0.23
SMARCA4-201ENST00000344626 SNX6Q9UNH7 406 aa16.47■□□□□ 0.23
SMARCA4-201ENST00000344626 PCDHGC4Q9Y5F7 938 aa16.47■□□□□ 0.23
SMARCA4-201ENST00000344626 BCLAF3A2AJT9 711 aaKnown RBP16.47■□□□□ 0.23
SMARCA4-201ENST00000344626 PCCBP05166 539 aa16.47■□□□□ 0.23
SMARCA4-201ENST00000344626 MAGEA11P43364 429 aa16.47■□□□□ 0.23
SMARCA4-201ENST00000344626 EOGTQ5NDL2 527 aa16.47■□□□□ 0.23
SMARCA4-201ENST00000344626 ATAD3BQ5T9A4 648 aa16.47■□□□□ 0.23
SMARCA4-201ENST00000344626 CYB5D2Q8WUJ1 264 aa16.47■□□□□ 0.23
SMARCA4-201ENST00000344626 AP2M1Q96CW1 435 aa16.47■□□□□ 0.23
SMARCA4-201ENST00000344626 BBS4Q96RK4 519 aa16.47■□□□□ 0.23
SMARCA4-201ENST00000344626 FANCEQ9HB96 536 aa16.47■□□□□ 0.23
SMARCA4-201ENST00000344626 THAP1Q9NVV9 213 aa16.47■□□□□ 0.23
SMARCA4-201ENST00000344626 NOCTQ9UK39 431 aaKnown RBP16.47■□□□□ 0.23
SMARCA4-201ENST00000344626 EIF4E1BA6NMX2 242 aaKnown RBP16.47■□□□□ 0.23
SMARCA4-201ENST00000344626 HNRNPA1P09651 372 aaKnown RBP eCLIP16.47■□□□□ 0.23
SMARCA4-201ENST00000344626 SPAM1P38567 509 aa16.47■□□□□ 0.23
SMARCA4-201ENST00000344626 AQP5P55064 265 aa16.47■□□□□ 0.23
SMARCA4-201ENST00000344626 RTP2Q5QGT7 225 aa16.47■□□□□ 0.23
SMARCA4-201ENST00000344626 COLGALT2Q8IYK4 626 aa16.47■□□□□ 0.23
SMARCA4-201ENST00000344626 SETD7Q8WTS6 366 aaKnown RBP16.47■□□□□ 0.23
SMARCA4-201ENST00000344626 HDAC10Q969S8 669 aa16.47■□□□□ 0.23
SMARCA4-201ENST00000344626 RERGQ96A58 199 aaPredicted RBP16.47■□□□□ 0.23
SMARCA4-201ENST00000344626 QKIQ96PU8 341 aaKnown RBP eCLIP16.47■□□□□ 0.23
SMARCA4-201ENST00000344626 SLC25A51Q9H1U9 297 aa16.47■□□□□ 0.23
SMARCA4-201ENST00000344626 KAT6AQ92794 2004 aa16.47■□□□□ 0.23
SMARCA4-201ENST00000344626 NHSQ6T4R5 1651 aa16.47■□□□□ 0.23
SMARCA4-201ENST00000344626 ALPPL2P10696 532 aa16.46■□□□□ 0.23
SMARCA4-201ENST00000344626 NUDT2P50583 147 aa16.46■□□□□ 0.23
SMARCA4-201ENST00000344626 SRLQ86TD4 932 aa16.46■□□□□ 0.23
SMARCA4-201ENST00000344626 TDHQ8IZJ6 230 aa16.46■□□□□ 0.23
SMARCA4-201ENST00000344626 CCDC185Q8N715 623 aa16.46■□□□□ 0.23
SMARCA4-201ENST00000344626 SMG8Q8ND04 991 aaKnown RBP16.46■□□□□ 0.23
SMARCA4-201ENST00000344626 ZMAT2Q96NC0 199 aaKnown RBP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms