RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 A0A1W2PQ67 120 aa8.18□□□□□ -1.1
ATG4A-201ENST00000343524 A8MU76 341 aa8.18□□□□□ -1.1
ATG4A-201ENST00000343524 PDZK1P1A8MUH7 402 aa8.18□□□□□ -1.1
ATG4A-201ENST00000343524 USP17L10C9JJH3 530 aa8.18□□□□□ -1.1
ATG4A-201ENST00000343524 F8VP50 259 aa8.18□□□□□ -1.1
ATG4A-201ENST00000343524 TNPO2O14787 897 aaKnown RBP8.18□□□□□ -1.1
ATG4A-201ENST00000343524 PSMD10O75832 226 aa8.18□□□□□ -1.1
ATG4A-201ENST00000343524 KCNH1O95259 989 aa8.18□□□□□ -1.1
ATG4A-201ENST00000343524 SEC24AO95486 1093 aa8.18□□□□□ -1.1
ATG4A-201ENST00000343524 TOP3BO95985 862 aaKnown RBP8.18□□□□□ -1.1
ATG4A-201ENST00000343524 KRT19P08727 400 aa8.18□□□□□ -1.1
ATG4A-201ENST00000343524 SLC10A3P09131 477 aa8.18□□□□□ -1.1
ATG4A-201ENST00000343524 BMP4P12644 408 aa8.18□□□□□ -1.1
ATG4A-201ENST00000343524 STMN1P16949 149 aa8.18□□□□□ -1.1
ATG4A-201ENST00000343524 TGM2P21980 687 aa8.18□□□□□ -1.1
ATG4A-201ENST00000343524 DNAJB1P25685 340 aa8.18□□□□□ -1.1
ATG4A-201ENST00000343524 PSMA2P25787 234 aa8.18□□□□□ -1.1
ATG4A-201ENST00000343524 RBL1P28749 1068 aa8.18□□□□□ -1.1
ATG4A-201ENST00000343524 SLC16A2P36021 539 aa8.18□□□□□ -1.1
ATG4A-201ENST00000343524 ARL1P40616 181 aaPredicted RBP8.18□□□□□ -1.1
ATG4A-201ENST00000343524 MLLT3P42568 568 aaPredicted RBP8.18□□□□□ -1.1
ATG4A-201ENST00000343524 RAP1GAPP47736 663 aa8.18□□□□□ -1.1
ATG4A-201ENST00000343524 RPL7AP62424 266 aaKnown RBP8.18□□□□□ -1.1
ATG4A-201ENST00000343524 IGBP1P78318 339 aa8.18□□□□□ -1.1
ATG4A-201ENST00000343524 ADARB1P78563 741 aaKnown RBP8.18□□□□□ -1.1
ATG4A-201ENST00000343524 CYP24A1Q07973 514 aa8.18□□□□□ -1.1
ATG4A-201ENST00000343524 SLC10A2Q12908 348 aaPredicted RBP8.18□□□□□ -1.1
ATG4A-201ENST00000343524 SMU1Q2TAY7 513 aa8.18□□□□□ -1.1
ATG4A-201ENST00000343524 CYBRD1Q53TN4 286 aa8.18□□□□□ -1.1
ATG4A-201ENST00000343524 GLRA4Q5JXX5 417 aa8.18□□□□□ -1.1
ATG4A-201ENST00000343524 GRTP1Q5TC63 336 aa8.18□□□□□ -1.1
ATG4A-201ENST00000343524 REP15Q6BDI9 236 aa8.18□□□□□ -1.1
ATG4A-201ENST00000343524 XAF1Q6GPH4 301 aa8.18□□□□□ -1.1
ATG4A-201ENST00000343524 LCN8Q6JVE9 175 aa8.18□□□□□ -1.1
ATG4A-201ENST00000343524 LLGL2Q6P1M3 1020 aa8.18□□□□□ -1.1
ATG4A-201ENST00000343524 TAF2Q6P1X5 1199 aa8.18□□□□□ -1.1
ATG4A-201ENST00000343524 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.18□□□□□ -1.1
ATG4A-201ENST00000343524 SV2AQ7L0J3 742 aa8.18□□□□□ -1.1
ATG4A-201ENST00000343524 BTLAQ7Z6A9 289 aa8.18□□□□□ -1.1
ATG4A-201ENST00000343524 CAND1Q86VP6 1230 aaKnown RBP8.18□□□□□ -1.1
ATG4A-201ENST00000343524 RALGPS2Q86X27 583 aaPredicted RBP8.18□□□□□ -1.1
ATG4A-201ENST00000343524 CBWD2Q8IUF1 395 aa8.18□□□□□ -1.1
ATG4A-201ENST00000343524 EPHX4Q8IUS5 362 aa8.18□□□□□ -1.1
ATG4A-201ENST00000343524 LYSMD2Q8IV50 215 aa8.18□□□□□ -1.1
ATG4A-201ENST00000343524 CDKL3Q8IVW4 592 aaPredicted RBP8.18□□□□□ -1.1
ATG4A-201ENST00000343524 CCDC103Q8IW40 242 aa8.18□□□□□ -1.1
ATG4A-201ENST00000343524 GALNT12Q8IXK2 581 aa8.18□□□□□ -1.1
ATG4A-201ENST00000343524 DDIASQ8IXT1 998 aa8.18□□□□□ -1.1
ATG4A-201ENST00000343524 SLC38A6Q8IZM9 456 aa8.18□□□□□ -1.1
ATG4A-201ENST00000343524 LGI2Q8N0V4 545 aa8.18□□□□□ -1.1
ATG4A-201ENST00000343524 Q8N9G6 341 aaPredicted RBP8.18□□□□□ -1.1
ATG4A-201ENST00000343524 KCTD6Q8NC69 237 aa8.18□□□□□ -1.1
ATG4A-201ENST00000343524 RHOXF1Q8NHV9 184 aa8.18□□□□□ -1.1
ATG4A-201ENST00000343524 ZFP90Q8TF47 636 aa8.18□□□□□ -1.1
ATG4A-201ENST00000343524 PROX1Q92786 737 aa8.18□□□□□ -1.1
ATG4A-201ENST00000343524 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.18□□□□□ -1.1
ATG4A-201ENST00000343524 SDCCAG3Q96C92 435 aa8.18□□□□□ -1.1
ATG4A-201ENST00000343524 FBXL20Q96IG2 436 aa8.18□□□□□ -1.1
ATG4A-201ENST00000343524 NPAS2Q99743 824 aa8.18□□□□□ -1.1
ATG4A-201ENST00000343524 GON7Q9BXV9 100 aa8.18□□□□□ -1.1
ATG4A-201ENST00000343524 RHOBTB2Q9BYZ6 727 aa8.18□□□□□ -1.1
ATG4A-201ENST00000343524 PRO3102Q9H379 93 aa8.18□□□□□ -1.1
ATG4A-201ENST00000343524 BCAS3Q9H6U6 928 aa8.18□□□□□ -1.1
ATG4A-201ENST00000343524 CACNA2D2Q9NY47 1150 aa8.18□□□□□ -1.1
ATG4A-201ENST00000343524 TMEM181Q9P2C4 612 aa8.18□□□□□ -1.1
ATG4A-201ENST00000343524 PI4KBQ9UBF8 816 aa8.18□□□□□ -1.1
ATG4A-201ENST00000343524 ZMAT5Q9UDW3 170 aaKnown RBP8.18□□□□□ -1.1
ATG4A-201ENST00000343524 KLQ9UEF7 1012 aa8.18□□□□□ -1.1
ATG4A-201ENST00000343524 MOSPD1Q9UJG1 213 aa8.18□□□□□ -1.1
ATG4A-201ENST00000343524 GGA1Q9UJY5 639 aa8.18□□□□□ -1.1
ATG4A-201ENST00000343524 CNTN6Q9UQ52 1028 aa8.18□□□□□ -1.1
ATG4A-201ENST00000343524 GRIP1Q9Y3R0 1128 aa8.18□□□□□ -1.1
ATG4A-201ENST00000343524 PCDHB4Q9Y5E5 795 aa8.18□□□□□ -1.1
ATG4A-201ENST00000343524 COPG1Q9Y678 874 aaKnown RBP8.18□□□□□ -1.1
ATG4A-201ENST00000343524 TCRBV5S1A1TA0A578 114 aa8.17□□□□□ -1.1
ATG4A-201ENST00000343524 BCLAF3A2AJT9 711 aaKnown RBP8.17□□□□□ -1.1
ATG4A-201ENST00000343524 E7ENX8 843 aa8.17□□□□□ -1.1
ATG4A-201ENST00000343524 STX16-NPEPL1H3BU86 382 aa8.17□□□□□ -1.1
ATG4A-201ENST00000343524 H7C0C1 242 aa8.17□□□□□ -1.1
ATG4A-201ENST00000343524 NEMP1O14524 444 aa8.17□□□□□ -1.1
ATG4A-201ENST00000343524 SHOXO15266 292 aa8.17□□□□□ -1.1
ATG4A-201ENST00000343524 SYNCRIPO60506 623 aaKnown RBP8.17□□□□□ -1.1
ATG4A-201ENST00000343524 MFN2O95140 757 aa8.17□□□□□ -1.1
ATG4A-201ENST00000343524 UMPSP11172 480 aa8.17□□□□□ -1.1
ATG4A-201ENST00000343524 PTGS2P35354 604 aa8.17□□□□□ -1.1
ATG4A-201ENST00000343524 DDOSTP39656 456 aa8.17□□□□□ -1.1
ATG4A-201ENST00000343524 GP5P40197 560 aa8.17□□□□□ -1.1
ATG4A-201ENST00000343524 HADHAP40939 763 aa8.17□□□□□ -1.1
ATG4A-201ENST00000343524 MAGEA12P43365 314 aa8.17□□□□□ -1.1
ATG4A-201ENST00000343524 ATP5OP48047 213 aa8.17□□□□□ -1.1
ATG4A-201ENST00000343524 ARCN1P48444 511 aaKnown RBP8.17□□□□□ -1.1
ATG4A-201ENST00000343524 ZNF157P51786 506 aaPredicted RBP8.17□□□□□ -1.1
ATG4A-201ENST00000343524 IFITM3Q01628 133 aa8.17□□□□□ -1.1
ATG4A-201ENST00000343524 RIPPLY1Q0D2K3 151 aa8.17□□□□□ -1.1
ATG4A-201ENST00000343524 MTM1Q13496 603 aa8.17□□□□□ -1.1
ATG4A-201ENST00000343524 CUL2Q13617 745 aa8.17□□□□□ -1.1
ATG4A-201ENST00000343524 ACOX1Q15067 660 aa8.17□□□□□ -1.1
ATG4A-201ENST00000343524 MAPK11Q15759 364 aa8.17□□□□□ -1.1
ATG4A-201ENST00000343524 FXNQ16595 210 aa8.17□□□□□ -1.1
ATG4A-201ENST00000343524 ARHGEF16Q5VV41 709 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms