RNA–Protein interactions for RNA: ENST00000340648.5

RRP1B-201, Transcript of ribosomal RNA processing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP1B, Length 5,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-201ENST00000340648 ZFP14Q9HCL3 533 aa14.91□□□□□ -0.02
RRP1B-201ENST00000340648 LSM7Q9UK45 103 aaKnown RBP14.91□□□□□ -0.02
RRP1B-201ENST00000340648 PARP4Q9UKK3 1724 aaKnown RBP14.91□□□□□ -0.02
RRP1B-201ENST00000340648 FFAR3O14843 346 aa14.9□□□□□ -0.02
RRP1B-201ENST00000340648 GPR182O15218 404 aa14.9□□□□□ -0.02
RRP1B-201ENST00000340648 GPR42O15529 346 aa14.9□□□□□ -0.02
RRP1B-201ENST00000340648 NADKO95544 446 aaPredicted RBP14.9□□□□□ -0.02
RRP1B-201ENST00000340648 COL6A2P12110 1019 aa14.9□□□□□ -0.02
RRP1B-201ENST00000340648 ZNF37AP17032 561 aaPredicted RBP14.9□□□□□ -0.02
RRP1B-201ENST00000340648 PAOXQ6QHF9 649 aa14.9□□□□□ -0.02
RRP1B-201ENST00000340648 TBC1D21Q8IYX1 336 aa14.9□□□□□ -0.02
RRP1B-201ENST00000340648 CARNMT1Q8N4J0 409 aa14.9□□□□□ -0.02
RRP1B-201ENST00000340648 ZNF540Q8NDQ6 660 aa14.9□□□□□ -0.02
RRP1B-201ENST00000340648 MCRS1Q96EZ8 462 aa14.9□□□□□ -0.02
RRP1B-201ENST00000340648 HERPUD2Q9BSE4 406 aa14.9□□□□□ -0.02
RRP1B-201ENST00000340648 DUSP16Q9BY84 665 aa14.9□□□□□ -0.02
RRP1B-201ENST00000340648 MAFBQ9Y5Q3 323 aaPredicted RBP14.9□□□□□ -0.02
RRP1B-201ENST00000340648 TTLL13PA6NNM8 815 aa14.9□□□□□ -0.02
RRP1B-201ENST00000340648 BBIP1A8MTZ0 92 aa14.9□□□□□ -0.02
RRP1B-201ENST00000340648 H3BSA7 217 aa14.9□□□□□ -0.02
RRP1B-201ENST00000340648 TSC22D2O75157 780 aa14.9□□□□□ -0.02
RRP1B-201ENST00000340648 PPIL2Q13356 520 aa14.9□□□□□ -0.02
RRP1B-201ENST00000340648 ZNF846Q147U1 533 aa14.9□□□□□ -0.02
RRP1B-201ENST00000340648 MAPKAPK3Q16644 382 aa14.9□□□□□ -0.02
RRP1B-201ENST00000340648 CTXN3Q4LDR2 81 aa14.9□□□□□ -0.02
RRP1B-201ENST00000340648 SLC9A4Q6AI14 798 aa14.9□□□□□ -0.02
RRP1B-201ENST00000340648 ZNF513Q8N8E2 541 aaPredicted RBP14.9□□□□□ -0.02
RRP1B-201ENST00000340648 HPS1Q92902 700 aa14.9□□□□□ -0.02
RRP1B-201ENST00000340648 NIFKQ9BYG3 293 aaKnown RBP14.9□□□□□ -0.02
RRP1B-201ENST00000340648 RCOR3Q9P2K3 495 aaPredicted RBP14.9□□□□□ -0.02
RRP1B-201ENST00000340648 VPS28Q9UK41 221 aa14.9□□□□□ -0.02
RRP1B-201ENST00000340648 TMCC3Q9ULS5 477 aa14.9□□□□□ -0.02
RRP1B-201ENST00000340648 FAM159BA6NKW6 160 aa14.9□□□□□ -0.02
RRP1B-201ENST00000340648 RECQL5O94762 991 aaPredicted RBP14.9□□□□□ -0.02
RRP1B-201ENST00000340648 DBTP11182 482 aaKnown RBP14.9□□□□□ -0.02
RRP1B-201ENST00000340648 IVDP26440 423 aa14.9□□□□□ -0.02
RRP1B-201ENST00000340648 RRM2P31350 389 aa14.9□□□□□ -0.02
RRP1B-201ENST00000340648 SPATA22Q8NHS9 363 aa14.9□□□□□ -0.02
RRP1B-201ENST00000340648 SMAD5Q99717 465 aaKnown RBP14.9□□□□□ -0.02
RRP1B-201ENST00000340648 C1orf21Q9H246 121 aa14.9□□□□□ -0.02
RRP1B-201ENST00000340648 ARMC7Q9H6L4 198 aa14.9□□□□□ -0.02
RRP1B-201ENST00000340648 GOLGA2P5Q9HBQ8 144 aa14.9□□□□□ -0.02
RRP1B-201ENST00000340648 GMPPBQ9Y5P6 360 aa14.9□□□□□ -0.02
RRP1B-201ENST00000340648 CYBBP04839 570 aa14.9□□□□□ -0.02
RRP1B-201ENST00000340648 CKMT2P17540 419 aa14.9□□□□□ -0.02
RRP1B-201ENST00000340648 GRM5P41594 1212 aa14.9□□□□□ -0.02
RRP1B-201ENST00000340648 TAF1CQ15572 869 aaPredicted RBP14.9□□□□□ -0.02
RRP1B-201ENST00000340648 IL23RQ5VWK5 629 aa14.9□□□□□ -0.02
RRP1B-201ENST00000340648 ZNF621Q6ZSS3 439 aa14.9□□□□□ -0.02
RRP1B-201ENST00000340648 AHI1Q8N157 1196 aa14.9□□□□□ -0.02
RRP1B-201ENST00000340648 TTC30BQ8N4P2 665 aa14.9□□□□□ -0.02
RRP1B-201ENST00000340648 LRRC52Q8N7C0 313 aa14.9□□□□□ -0.02
RRP1B-201ENST00000340648 DENND1AQ8TEH3 1009 aa14.9□□□□□ -0.02
RRP1B-201ENST00000340648 DPEP3Q9H4B8 488 aa14.9□□□□□ -0.02
RRP1B-201ENST00000340648 SMPD3Q9NY59 655 aaPredicted RBP14.9□□□□□ -0.02
RRP1B-201ENST00000340648 SLC22A3O75751 556 aa14.89□□□□□ -0.03
RRP1B-201ENST00000340648 GPD2P43304 727 aa14.89□□□□□ -0.03
RRP1B-201ENST00000340648 IDH2P48735 452 aaKnown RBP14.89□□□□□ -0.03
RRP1B-201ENST00000340648 RPL38P63173 70 aaKnown RBP14.89□□□□□ -0.03
RRP1B-201ENST00000340648 PSMD5Q16401 504 aa14.89□□□□□ -0.03
RRP1B-201ENST00000340648 LDB1Q86U70 411 aaPredicted RBP14.89□□□□□ -0.03
RRP1B-201ENST00000340648 SLCO6A1Q86UG4 719 aa14.89□□□□□ -0.03
RRP1B-201ENST00000340648 TRMOQ9BU70 441 aa14.89□□□□□ -0.03
RRP1B-201ENST00000340648 ADI1Q9BV57 179 aa14.89□□□□□ -0.03
RRP1B-201ENST00000340648 NXF3Q9H4D5 531 aaKnown RBP14.89□□□□□ -0.03
RRP1B-201ENST00000340648 GLOD4Q9HC38 313 aa14.89□□□□□ -0.03
RRP1B-201ENST00000340648 ATP13A1Q9HD20 1204 aa14.89□□□□□ -0.03
RRP1B-201ENST00000340648 CNGB3Q9NQW8 809 aa14.89□□□□□ -0.03
RRP1B-201ENST00000340648 U3KQV3 271 aa14.89□□□□□ -0.03
RRP1B-201ENST00000340648 CYP4B1P13584 511 aa14.89□□□□□ -0.03
RRP1B-201ENST00000340648 PTPN9P43378 593 aa14.89□□□□□ -0.03
RRP1B-201ENST00000340648 RALGPS2Q86X27 583 aaPredicted RBP14.89□□□□□ -0.03
RRP1B-201ENST00000340648 DENND6AQ8IWF6 608 aa14.89□□□□□ -0.03
RRP1B-201ENST00000340648 CLEC4CQ8WTT0 213 aa14.89□□□□□ -0.03
RRP1B-201ENST00000340648 ZHX1-C8orf76Q96EF9 292 aa14.89□□□□□ -0.03
RRP1B-201ENST00000340648 RHOBTB2Q9BYZ6 727 aa14.89□□□□□ -0.03
RRP1B-201ENST00000340648 GBA3Q9H227 469 aa14.89□□□□□ -0.03
RRP1B-201ENST00000340648 REEP1Q9H902 201 aa14.89□□□□□ -0.03
RRP1B-201ENST00000340648 ABCC13Q9NSE7 274 aa14.89□□□□□ -0.03
RRP1B-201ENST00000340648 EURLQ9NYK6 297 aa14.89□□□□□ -0.03
RRP1B-201ENST00000340648 MPP6Q9NZW5 540 aa14.89□□□□□ -0.03
RRP1B-201ENST00000340648 H2AFY2Q9P0M6 372 aaPredicted RBP14.89□□□□□ -0.03
RRP1B-201ENST00000340648 SH3BP4Q9P0V3 963 aa14.89□□□□□ -0.03
RRP1B-201ENST00000340648 OPTCQ9UBM4 332 aa14.89□□□□□ -0.03
RRP1B-201ENST00000340648 KLHL3Q9UH77 587 aa14.89□□□□□ -0.03
RRP1B-201ENST00000340648 CD3EAPO15446 510 aaKnown RBP14.89□□□□□ -0.03
RRP1B-201ENST00000340648 SH3BGRLO75368 114 aa14.89□□□□□ -0.03
RRP1B-201ENST00000340648 ANXA6P08133 673 aa14.89□□□□□ -0.03
RRP1B-201ENST00000340648 ADORA2AP29274 412 aa14.89□□□□□ -0.03
RRP1B-201ENST00000340648 GPR158Q5T848 1215 aa14.89□□□□□ -0.03
RRP1B-201ENST00000340648 HECTD2Q5U5R9 776 aa14.89□□□□□ -0.03
RRP1B-201ENST00000340648 GPRIN3Q6ZVF9 776 aa14.89□□□□□ -0.03
RRP1B-201ENST00000340648 TRIM74Q86UV6 250 aa14.89□□□□□ -0.03
RRP1B-201ENST00000340648 TRIM73Q86UV7 250 aa14.89□□□□□ -0.03
RRP1B-201ENST00000340648 FANCEQ9HB96 536 aa14.89□□□□□ -0.03
RRP1B-201ENST00000340648 C5P01031 1676 aa14.89□□□□□ -0.03
RRP1B-201ENST00000340648 STAU1O95793 577 aaKnown RBP14.89□□□□□ -0.03
RRP1B-201ENST00000340648 MLYCDO95822 493 aa14.89□□□□□ -0.03
RRP1B-201ENST00000340648 AXLP30530 894 aa14.89□□□□□ -0.03
RRP1B-201ENST00000340648 KRT20P35900 424 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms