RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 DCLRE1BQ9H816 532 aa1.58□□□□□ -2.16
LINC00643-201ENST00000334389 KAT14Q9H8E8 782 aa1.58□□□□□ -2.16
LINC00643-201ENST00000334389 GPAMQ9HCL2 828 aa1.58□□□□□ -2.16
LINC00643-201ENST00000334389 PRSS16Q9NQE7 514 aa1.58□□□□□ -2.16
LINC00643-201ENST00000334389 XPNPEP1Q9NQW7 623 aa1.58□□□□□ -2.16
LINC00643-201ENST00000334389 GKN1Q9NS71 199 aa1.58□□□□□ -2.16
LINC00643-201ENST00000334389 SAMSN1Q9NSI8 373 aaKnown RBP1.58□□□□□ -2.16
LINC00643-201ENST00000334389 POT1Q9NUX5 634 aa1.58□□□□□ -2.16
LINC00643-201ENST00000334389 IL20RAQ9UHF4 553 aa1.58□□□□□ -2.16
LINC00643-201ENST00000334389 EIF3LQ9Y262 564 aaKnown RBP1.58□□□□□ -2.16
LINC00643-201ENST00000334389 FLNCQ14315 2725 aa1.58□□□□□ -2.16
LINC00643-201ENST00000334389 DSPPQ9NZW4 1301 aa1.58□□□□□ -2.16
LINC00643-201ENST00000334389 CCDC189A1A4V9 331 aa1.58□□□□□ -2.16
LINC00643-201ENST00000334389 OTOL1A6NHN0 477 aaPredicted RBP1.58□□□□□ -2.16
LINC00643-201ENST00000334389 ADAM10O14672 748 aa1.58□□□□□ -2.16
LINC00643-201ENST00000334389 MCF2LO15068 1137 aa1.58□□□□□ -2.16
LINC00643-201ENST00000334389 MTSS1O43312 755 aa1.58□□□□□ -2.16
LINC00643-201ENST00000334389 AQP9O43315 295 aa1.58□□□□□ -2.16
LINC00643-201ENST00000334389 THAP12O43422 761 aa1.58□□□□□ -2.16
LINC00643-201ENST00000334389 DLX3O60479 287 aa1.58□□□□□ -2.16
LINC00643-201ENST00000334389 LARGE1O95461 756 aa1.58□□□□□ -2.16
LINC00643-201ENST00000334389 ATP5BP06576 529 aaKnown RBP1.58□□□□□ -2.16
LINC00643-201ENST00000334389 DLDP09622 509 aaKnown RBP1.58□□□□□ -2.16
LINC00643-201ENST00000334389 WEE2P0C1S8 567 aa1.58□□□□□ -2.16
LINC00643-201ENST00000334389 GABRA1P14867 456 aa1.58□□□□□ -2.16
LINC00643-201ENST00000334389 ARF4P18085 180 aaPredicted RBP1.58□□□□□ -2.16
LINC00643-201ENST00000334389 CRYGSP22914 178 aa1.58□□□□□ -2.16
LINC00643-201ENST00000334389 RPA1P27694 616 aa1.58□□□□□ -2.16
LINC00643-201ENST00000334389 PBX1P40424 430 aa1.58□□□□□ -2.16
LINC00643-201ENST00000334389 GATA4P43694 442 aa1.58□□□□□ -2.16
LINC00643-201ENST00000334389 EIF3BP55884 814 aaKnown RBP1.58□□□□□ -2.16
LINC00643-201ENST00000334389 IRX6P78412 446 aaPredicted RBP1.58□□□□□ -2.16
LINC00643-201ENST00000334389 IL13RA1P78552 427 aa1.58□□□□□ -2.16
LINC00643-201ENST00000334389 HGFACQ04756 655 aa1.58□□□□□ -2.16
LINC00643-201ENST00000334389 YWHAHQ04917 246 aaPredicted RBP1.58□□□□□ -2.16
LINC00643-201ENST00000334389 ELOAQ14241 798 aaKnown RBP1.58□□□□□ -2.16
LINC00643-201ENST00000334389 KRT32Q14532 448 aa1.58□□□□□ -2.16
LINC00643-201ENST00000334389 ANO4Q32M45 955 aa1.58□□□□□ -2.16
LINC00643-201ENST00000334389 ZNF658BQ4V348 819 aaPredicted RBP1.58□□□□□ -2.16
LINC00643-201ENST00000334389 INO80DQ53TQ3 878 aaPredicted RBP1.58□□□□□ -2.16
LINC00643-201ENST00000334389 ZNF667Q5HYK9 610 aa1.58□□□□□ -2.16
LINC00643-201ENST00000334389 ATXN7L2Q5T6C5 722 aaPredicted RBP1.58□□□□□ -2.16
LINC00643-201ENST00000334389 PHF19Q5T6S3 580 aa1.58□□□□□ -2.16
LINC00643-201ENST00000334389 NT5DC1Q5TFE4 455 aa1.58□□□□□ -2.16
LINC00643-201ENST00000334389 C9orf57Q5W0N0 161 aa1.58□□□□□ -2.16
LINC00643-201ENST00000334389 BTBD8Q5XKL5 378 aa1.58□□□□□ -2.16
LINC00643-201ENST00000334389 LLGL2Q6P1M3 1020 aa1.58□□□□□ -2.16
LINC00643-201ENST00000334389 RINLQ6ZS11 566 aa1.58□□□□□ -2.16
LINC00643-201ENST00000334389 CYFIP1Q7L576 1253 aa1.58□□□□□ -2.16
LINC00643-201ENST00000334389 OSTM1Q86WC4 334 aa1.58□□□□□ -2.16
LINC00643-201ENST00000334389 C12orf40Q86WS4 652 aa1.58□□□□□ -2.16
LINC00643-201ENST00000334389 CATSPER3Q86XQ3 398 aa1.58□□□□□ -2.16
LINC00643-201ENST00000334389 NXPE1Q8N323 547 aa1.58□□□□□ -2.16
LINC00643-201ENST00000334389 SLC25A41Q8N5S1 370 aa1.58□□□□□ -2.16
LINC00643-201ENST00000334389 OR2M7Q8NG81 312 aa1.58□□□□□ -2.16
LINC00643-201ENST00000334389 SLC7A3Q8WY07 619 aa1.58□□□□□ -2.16
LINC00643-201ENST00000334389 NR4A3Q92570 626 aa1.58□□□□□ -2.16
LINC00643-201ENST00000334389 PIGKQ92643 395 aa1.58□□□□□ -2.16
LINC00643-201ENST00000334389 TOE1Q96GM8 510 aaKnown RBP1.58□□□□□ -2.16
LINC00643-201ENST00000334389 SENP5Q96HI0 755 aaPredicted RBP1.58□□□□□ -2.16
LINC00643-201ENST00000334389 PCMTD1Q96MG8 357 aaPredicted RBP1.58□□□□□ -2.16
LINC00643-201ENST00000334389 ZNF317Q96PQ6 595 aaPredicted RBP1.58□□□□□ -2.16
LINC00643-201ENST00000334389 CDK15Q96Q40 435 aa1.58□□□□□ -2.16
LINC00643-201ENST00000334389 FAM129BQ96TA1 746 aa1.58□□□□□ -2.16
LINC00643-201ENST00000334389 KLF6Q99612 283 aaPredicted RBP1.58□□□□□ -2.16
LINC00643-201ENST00000334389 ZMYND15Q9H091 742 aa1.58□□□□□ -2.16
LINC00643-201ENST00000334389 SIK2Q9H0K1 926 aa1.58□□□□□ -2.16
LINC00643-201ENST00000334389 MMP27Q9H306 513 aa1.58□□□□□ -2.16
LINC00643-201ENST00000334389 TP63Q9H3D4 680 aaPredicted RBP1.58□□□□□ -2.16
LINC00643-201ENST00000334389 CUEDC2Q9H467 287 aa1.58□□□□□ -2.16
LINC00643-201ENST00000334389 RANBP3Q9H6Z4 567 aaPredicted RBP1.58□□□□□ -2.16
LINC00643-201ENST00000334389 IL1RAPL2Q9NP60 686 aa1.58□□□□□ -2.16
LINC00643-201ENST00000334389 OLFML3Q9NRN5 406 aa1.58□□□□□ -2.16
LINC00643-201ENST00000334389 MED29Q9NX70 200 aa1.58□□□□□ -2.16
LINC00643-201ENST00000334389 APEX2Q9UBZ4 518 aa1.58□□□□□ -2.16
LINC00643-201ENST00000334389 RALYQ9UKM9 306 aaKnown RBP1.58□□□□□ -2.16
LINC00643-201ENST00000334389 RAD54BQ9Y620 910 aa1.58□□□□□ -2.16
LINC00643-201ENST00000334389 MTORP42345 2549 aa1.58□□□□□ -2.16
LINC00643-201ENST00000334389 ITPR1Q14643 2758 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 A0A0U1RQJ8 604 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 A0A1B0GVM2 712 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 ANKUB1A6NFN9 424 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 KLRF2D3W0D1 207 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 CLDN4O14493 209 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 TRIM24O15164 1050 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 MGRN1O60291 552 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 TLR5O60602 858 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 UGT1A9O60656 530 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 WISP2O76076 250 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 AGFG2O95081 481 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 SLC2A3P11169 496 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 GAP43P17677 238 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 FECHP22830 423 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 GLRA2P23416 452 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 ERCC5P28715 1186 aaPredicted RBP1.57□□□□□ -2.16
LINC00643-201ENST00000334389 EEF1DP29692 281 aaKnown RBP1.57□□□□□ -2.16
LINC00643-201ENST00000334389 MAPK9P45984 424 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 GABRA4P48169 554 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 EVX1P49640 407 aa1.57□□□□□ -2.16
LINC00643-201ENST00000334389 MEOX1P50221 254 aa1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms