RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 SH2D4BQ5SQS7 431 aa14.95□□□□□ -0.02
CLCNKA-201ENST00000331433 HECTD2Q5U5R9 776 aa14.95□□□□□ -0.02
CLCNKA-201ENST00000331433 PGM2L1Q6PCE3 622 aa14.95□□□□□ -0.02
CLCNKA-201ENST00000331433 ACAD11Q709F0 780 aa14.95□□□□□ -0.02
CLCNKA-201ENST00000331433 HPS6Q86YV9 775 aa14.95□□□□□ -0.02
CLCNKA-201ENST00000331433 KBTBD2Q8IY47 623 aa14.95□□□□□ -0.02
CLCNKA-201ENST00000331433 KDM1BQ8NB78 822 aa14.95□□□□□ -0.02
CLCNKA-201ENST00000331433 TBATAQ96M53 351 aa14.95□□□□□ -0.02
CLCNKA-201ENST00000331433 CATSPER2Q96P56 530 aa14.95□□□□□ -0.02
CLCNKA-201ENST00000331433 POLR1EQ9GZS1 481 aaKnown RBP14.95□□□□□ -0.02
CLCNKA-201ENST00000331433 NCKIPSDQ9NZQ3 722 aa14.95□□□□□ -0.02
CLCNKA-201ENST00000331433 ARHGAP26Q9UNA1 814 aa14.95□□□□□ -0.02
CLCNKA-201ENST00000331433 CDYLQ9Y232 598 aa14.95□□□□□ -0.02
CLCNKA-201ENST00000331433 FIS1Q9Y3D6 152 aa14.95□□□□□ -0.02
CLCNKA-201ENST00000331433 AIM2O14862 343 aa14.94□□□□□ -0.02
CLCNKA-201ENST00000331433 TBC1D4O60343 1298 aa14.94□□□□□ -0.02
CLCNKA-201ENST00000331433 PRAMEF11O60813 436 aa14.94□□□□□ -0.02
CLCNKA-201ENST00000331433 GALTP07902 379 aa14.94□□□□□ -0.02
CLCNKA-201ENST00000331433 PDHA1P08559 390 aa14.94□□□□□ -0.02
CLCNKA-201ENST00000331433 ZDHHC11BP0C7U3 371 aa14.94□□□□□ -0.02
CLCNKA-201ENST00000331433 RPL17P18621 184 aaKnown RBP14.94□□□□□ -0.02
CLCNKA-201ENST00000331433 ATP5F1P24539 256 aaPredicted RBP14.94□□□□□ -0.02
CLCNKA-201ENST00000331433 PRDX6P30041 224 aa14.94□□□□□ -0.02
CLCNKA-201ENST00000331433 SLC6A4P31645 630 aa14.94□□□□□ -0.02
CLCNKA-201ENST00000331433 CDKN2DP55273 166 aa14.94□□□□□ -0.02
CLCNKA-201ENST00000331433 RING1Q06587 406 aa14.94□□□□□ -0.02
CLCNKA-201ENST00000331433 TBL3Q12788 808 aaKnown RBP14.94□□□□□ -0.02
CLCNKA-201ENST00000331433 ZNF235Q14590 738 aa14.94□□□□□ -0.02
CLCNKA-201ENST00000331433 EML3Q32P44 896 aa14.94□□□□□ -0.02
CLCNKA-201ENST00000331433 TMCO4Q5TGY1 634 aa14.94□□□□□ -0.02
CLCNKA-201ENST00000331433 PIM3Q86V86 326 aa14.94□□□□□ -0.02
CLCNKA-201ENST00000331433 SNX32Q86XE0 403 aa14.94□□□□□ -0.02
CLCNKA-201ENST00000331433 PYDC1Q8WXC3 89 aa14.94□□□□□ -0.02
CLCNKA-201ENST00000331433 HHIPL1Q96JK4 782 aa14.94□□□□□ -0.02
CLCNKA-201ENST00000331433 MFSD1Q9H3U5 465 aa14.94□□□□□ -0.02
CLCNKA-201ENST00000331433 ELAC1Q9H777 363 aaKnown RBP14.94□□□□□ -0.02
CLCNKA-201ENST00000331433 GTSE1Q9NYZ3 720 aa14.94□□□□□ -0.02
CLCNKA-201ENST00000331433 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.94□□□□□ -0.02
CLCNKA-201ENST00000331433 PACSIN3Q9UKS6 424 aa14.94□□□□□ -0.02
CLCNKA-201ENST00000331433 ANGPTL2Q9UKU9 493 aa14.94□□□□□ -0.02
CLCNKA-201ENST00000331433 CRYL1Q9Y2S2 319 aa14.94□□□□□ -0.02
CLCNKA-201ENST00000331433 VWA7Q9Y334 891 aa14.94□□□□□ -0.02
CLCNKA-201ENST00000331433 SLC38A8A6NNN8 435 aa14.94□□□□□ -0.02
CLCNKA-201ENST00000331433 SLC7A4O43246 635 aa14.94□□□□□ -0.02
CLCNKA-201ENST00000331433 LUC7L3O95232 432 aaKnown RBP14.94□□□□□ -0.02
CLCNKA-201ENST00000331433 S1PR4O95977 384 aa14.94□□□□□ -0.02
CLCNKA-201ENST00000331433 HOXD10P28358 340 aa14.94□□□□□ -0.02
CLCNKA-201ENST00000331433 AP2B1P63010 937 aa14.94□□□□□ -0.02
CLCNKA-201ENST00000331433 BTKQ06187 659 aa14.94□□□□□ -0.02
CLCNKA-201ENST00000331433 TNK2Q07912 1038 aa14.94□□□□□ -0.02
CLCNKA-201ENST00000331433 FAM219BQ5XKK7 198 aa14.94□□□□□ -0.02
CLCNKA-201ENST00000331433 ANO7Q6IWH7 933 aa14.94□□□□□ -0.02
CLCNKA-201ENST00000331433 TMEM207Q6UWW9 146 aa14.94□□□□□ -0.02
CLCNKA-201ENST00000331433 PIWIL4Q7Z3Z4 852 aaKnown RBP14.94□□□□□ -0.02
CLCNKA-201ENST00000331433 HIPK4Q8NE63 616 aa14.94□□□□□ -0.02
CLCNKA-201ENST00000331433 OR52K2Q8NGK3 314 aa14.94□□□□□ -0.02
CLCNKA-201ENST00000331433 IFT43Q96FT9 208 aa14.94□□□□□ -0.02
CLCNKA-201ENST00000331433 DNAJC1Q96KC8 554 aaKnown RBP14.94□□□□□ -0.02
CLCNKA-201ENST00000331433 RTKNQ9BST9 563 aa14.94□□□□□ -0.02
CLCNKA-201ENST00000331433 TTPALQ9BTX7 342 aa14.94□□□□□ -0.02
CLCNKA-201ENST00000331433 VTI1BQ9UEU0 232 aa14.94□□□□□ -0.02
CLCNKA-201ENST00000331433 LAMA2P24043 3122 aaKnown RBP14.94□□□□□ -0.02
CLCNKA-201ENST00000331433 TBKBP1A7MCY6 615 aa14.93□□□□□ -0.02
CLCNKA-201ENST00000331433 A8MT66 165 aa14.93□□□□□ -0.02
CLCNKA-201ENST00000331433 F5H5T6 163 aa14.93□□□□□ -0.02
CLCNKA-201ENST00000331433 NPHS1O60500 1241 aa14.93□□□□□ -0.02
CLCNKA-201ENST00000331433 LTA4HP09960 611 aaKnown RBP14.93□□□□□ -0.02
CLCNKA-201ENST00000331433 MAPKAPK2P49137 400 aa14.93□□□□□ -0.02
CLCNKA-201ENST00000331433 NUDT2P50583 147 aa14.93□□□□□ -0.02
CLCNKA-201ENST00000331433 KPNA2P52292 529 aaKnown RBP14.93□□□□□ -0.02
CLCNKA-201ENST00000331433 HK2P52789 917 aa14.93□□□□□ -0.02
CLCNKA-201ENST00000331433 ASPHQ12797 758 aa14.93□□□□□ -0.02
CLCNKA-201ENST00000331433 AGAP9Q5VTM2 703 aa14.93□□□□□ -0.02
CLCNKA-201ENST00000331433 PPFIBP2Q8ND30 876 aa14.93□□□□□ -0.02
CLCNKA-201ENST00000331433 OR7D4Q8NG98 312 aa14.93□□□□□ -0.02
CLCNKA-201ENST00000331433 PDCD6IPQ8WUM4 868 aaKnown RBP14.93□□□□□ -0.02
CLCNKA-201ENST00000331433 PHF21BQ96EK2 531 aa14.93□□□□□ -0.02
CLCNKA-201ENST00000331433 CNDP1Q96KN2 507 aa14.93□□□□□ -0.02
CLCNKA-201ENST00000331433 TNFRSF12AQ9NP84 129 aa14.93□□□□□ -0.02
CLCNKA-201ENST00000331433 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.93□□□□□ -0.02
CLCNKA-201ENST00000331433 SLC4A1P02730 911 aa14.93□□□□□ -0.02
CLCNKA-201ENST00000331433 ARSAP15289 507 aa14.93□□□□□ -0.02
CLCNKA-201ENST00000331433 PPARGP37231 505 aaPredicted RBP14.93□□□□□ -0.02
CLCNKA-201ENST00000331433 YBEYP58557 167 aaPredicted RBP14.93□□□□□ -0.02
CLCNKA-201ENST00000331433 PFKPQ01813 784 aa14.93□□□□□ -0.02
CLCNKA-201ENST00000331433 CCNIQ14094 377 aa14.93□□□□□ -0.02
CLCNKA-201ENST00000331433 CMPK2Q5EBM0 449 aa14.93□□□□□ -0.02
CLCNKA-201ENST00000331433 GPR158Q5T848 1215 aa14.93□□□□□ -0.02
CLCNKA-201ENST00000331433 OR13C4Q8NGS5 318 aa14.93□□□□□ -0.02
CLCNKA-201ENST00000331433 GABPB2Q8TAK5 448 aaPredicted RBP14.93□□□□□ -0.02
CLCNKA-201ENST00000331433 TSPAN17Q96FV3 270 aa14.93□□□□□ -0.02
CLCNKA-201ENST00000331433 UBXN10Q96LJ8 280 aa14.93□□□□□ -0.02
CLCNKA-201ENST00000331433 PDFQ9HBH1 243 aa14.93□□□□□ -0.02
CLCNKA-201ENST00000331433 GPBP1L1Q9HC44 474 aaPredicted RBP14.93□□□□□ -0.02
CLCNKA-201ENST00000331433 HMX1Q9NP08 348 aaPredicted RBP14.93□□□□□ -0.02
CLCNKA-201ENST00000331433 NDE1Q9NXR1 346 aa14.93□□□□□ -0.02
CLCNKA-201ENST00000331433 POMPQ9Y244 141 aa14.93□□□□□ -0.02
CLCNKA-201ENST00000331433 MKI67P46013 3256 aaKnown RBP14.93□□□□□ -0.02
CLCNKA-201ENST00000331433 SLCO1B7G3V0H7 640 aa14.92□□□□□ -0.02
CLCNKA-201ENST00000331433 MAP3K7O43318 606 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms