RNA–Protein interactions for RNA: ENST00000330374.6

VMA21-201, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMA21, Length 4,717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-201ENST00000330374 C6orf10Q5SRN2 563 aa7.94□□□□□ -1.14
VMA21-201ENST00000330374 C1QTNF12Q5T7M4 302 aa7.94□□□□□ -1.14
VMA21-201ENST00000330374 TSTD2Q5T7W7 516 aa7.94□□□□□ -1.14
VMA21-201ENST00000330374 ALG1LQ6GMV1 187 aa7.94□□□□□ -1.14
VMA21-201ENST00000330374 FBXO16Q8IX29 292 aaPredicted RBP7.94□□□□□ -1.14
VMA21-201ENST00000330374 TMEM151AQ8N4L1 468 aa7.94□□□□□ -1.14
VMA21-201ENST00000330374 SPPL2BQ8TCT7 592 aa7.94□□□□□ -1.14
VMA21-201ENST00000330374 TFAP2CQ92754 450 aa7.94□□□□□ -1.14
VMA21-201ENST00000330374 TEPSINQ96N21 525 aa7.94□□□□□ -1.14
VMA21-201ENST00000330374 HIPK3Q9H422 1215 aa7.94□□□□□ -1.14
VMA21-201ENST00000330374 PDZD7Q9H5P4 517 aa7.94□□□□□ -1.14
VMA21-201ENST00000330374 ZNF385DQ9H6B1 395 aa7.94□□□□□ -1.14
VMA21-201ENST00000330374 KLK14Q9P0G3 267 aa7.94□□□□□ -1.14
VMA21-201ENST00000330374 SUCOQ9UBS9 1254 aaKnown RBP7.94□□□□□ -1.14
VMA21-201ENST00000330374 WARS2Q9UGM6 360 aaKnown RBP7.94□□□□□ -1.14
VMA21-201ENST00000330374 PGAP2Q9UHJ9 254 aa7.94□□□□□ -1.14
VMA21-201ENST00000330374 VPS28Q9UK41 221 aa7.94□□□□□ -1.14
VMA21-201ENST00000330374 FZD10Q9ULW2 581 aa7.94□□□□□ -1.14
VMA21-201ENST00000330374 CORINQ9Y5Q5 1042 aa7.94□□□□□ -1.14
VMA21-201ENST00000330374 TRPC5OSA6NMA1 111 aa7.93□□□□□ -1.14
VMA21-201ENST00000330374 HACD1B0YJ81 288 aa7.93□□□□□ -1.14
VMA21-201ENST00000330374 CCL22O00626 93 aa7.93□□□□□ -1.14
VMA21-201ENST00000330374 NRP2O60462 931 aa7.93□□□□□ -1.14
VMA21-201ENST00000330374 CBFA2T3O75081 653 aa7.93□□□□□ -1.14
VMA21-201ENST00000330374 HSPA8P11142 646 aaKnown RBP7.93□□□□□ -1.14
VMA21-201ENST00000330374 ATICP31939 592 aa7.93□□□□□ -1.14
VMA21-201ENST00000330374 HALP42357 657 aa7.93□□□□□ -1.14
VMA21-201ENST00000330374 TMED10P49755 219 aaKnown RBP7.93□□□□□ -1.14
VMA21-201ENST00000330374 MERTKQ12866 999 aa7.93□□□□□ -1.14
VMA21-201ENST00000330374 BFSP2Q13515 415 aa7.93□□□□□ -1.14
VMA21-201ENST00000330374 LRP8Q14114 963 aa7.93□□□□□ -1.14
VMA21-201ENST00000330374 HABP4Q5JVS0 413 aaKnown RBP7.93□□□□□ -1.14
VMA21-201ENST00000330374 SNAP47Q5SQN1 464 aa7.93□□□□□ -1.14
VMA21-201ENST00000330374 ARHGAP17Q68EM7 881 aa7.93□□□□□ -1.14
VMA21-201ENST00000330374 ESRP1Q6NXG1 681 aaKnown RBP7.93□□□□□ -1.14
VMA21-201ENST00000330374 DCDC5Q6ZRR9 648 aa7.93□□□□□ -1.14
VMA21-201ENST00000330374 HFE2Q6ZVN8 426 aa7.93□□□□□ -1.14
VMA21-201ENST00000330374 TMEM135Q86UB9 458 aa7.93□□□□□ -1.14
VMA21-201ENST00000330374 PARP8Q8N3A8 854 aa7.93□□□□□ -1.14
VMA21-201ENST00000330374 SLC15A4Q8N697 577 aa7.93□□□□□ -1.14
VMA21-201ENST00000330374 GPR152Q8TDT2 470 aa7.93□□□□□ -1.14
VMA21-201ENST00000330374 STYXQ8WUJ0 223 aa7.93□□□□□ -1.14
VMA21-201ENST00000330374 VPS50Q96JG6 964 aa7.93□□□□□ -1.14
VMA21-201ENST00000330374 NPLQ9BXD5 320 aaPredicted RBP7.93□□□□□ -1.14
VMA21-201ENST00000330374 C1QTNF1Q9BXJ1 281 aa7.93□□□□□ -1.14
VMA21-201ENST00000330374 ANKRD60Q9BZ19 345 aa7.93□□□□□ -1.14
VMA21-201ENST00000330374 ZFYVE28Q9HCC9 887 aa7.93□□□□□ -1.14
VMA21-201ENST00000330374 SETD4Q9NVD3 440 aa7.93□□□□□ -1.14
VMA21-201ENST00000330374 TRIM17Q9Y577 477 aa7.93□□□□□ -1.14
VMA21-201ENST00000330374 LY75O60449 1722 aa7.93□□□□□ -1.14
VMA21-201ENST00000330374 CFAP99D6REC4 459 aa7.93□□□□□ -1.14
VMA21-201ENST00000330374 SUPT7LO94864 414 aa7.93□□□□□ -1.14
VMA21-201ENST00000330374 C8BP07358 591 aa7.93□□□□□ -1.14
VMA21-201ENST00000330374 MYCLP1P12525 358 aaPredicted RBP7.93□□□□□ -1.14
VMA21-201ENST00000330374 MAGEA12P43365 314 aa7.93□□□□□ -1.14
VMA21-201ENST00000330374 BMXP51813 675 aa7.93□□□□□ -1.14
VMA21-201ENST00000330374 TPI1P60174 286 aa7.93□□□□□ -1.14
VMA21-201ENST00000330374 LINC01559Q495D7 138 aa7.93□□□□□ -1.14
VMA21-201ENST00000330374 ZNF470Q6ECI4 717 aa7.93□□□□□ -1.14
VMA21-201ENST00000330374 MAMDC4Q6UXC1 1216 aa7.93□□□□□ -1.14
VMA21-201ENST00000330374 LDB1Q86U70 411 aaPredicted RBP7.93□□□□□ -1.14
VMA21-201ENST00000330374 MFSD6LQ8IWD5 586 aa7.93□□□□□ -1.14
VMA21-201ENST00000330374 OR2T34Q8NGX1 318 aa7.93□□□□□ -1.14
VMA21-201ENST00000330374 OR2T3Q8NH03 318 aa7.93□□□□□ -1.14
VMA21-201ENST00000330374 TBC1D15Q8TC07 691 aa7.93□□□□□ -1.14
VMA21-201ENST00000330374 BORCS5Q969J3 196 aa7.93□□□□□ -1.14
VMA21-201ENST00000330374 IL22Q9GZX6 179 aa7.93□□□□□ -1.14
VMA21-201ENST00000330374 ADNPQ9H2P0 1102 aa7.93□□□□□ -1.14
VMA21-201ENST00000330374 VPS45Q9NRW7 570 aa7.93□□□□□ -1.14
VMA21-201ENST00000330374 SNTG2Q9NY99 539 aa7.93□□□□□ -1.14
VMA21-201ENST00000330374 MTF2Q9Y483 593 aaPredicted RBP7.93□□□□□ -1.14
VMA21-201ENST00000330374 FADS3Q9Y5Q0 445 aa7.93□□□□□ -1.14
VMA21-201ENST00000330374 COL2A1P02458 1487 aaPredicted RBP7.93□□□□□ -1.14
VMA21-201ENST00000330374 IGKV6D-21A0A0A0MT36 114 aa7.93□□□□□ -1.14
VMA21-201ENST00000330374 DHRS12A0PJE2 317 aa7.93□□□□□ -1.14
VMA21-201ENST00000330374 TMEM221A6NGB7 291 aa7.93□□□□□ -1.14
VMA21-201ENST00000330374 ADAM23O75077 832 aa7.93□□□□□ -1.14
VMA21-201ENST00000330374 PMPCBO75439 489 aa7.93□□□□□ -1.14
VMA21-201ENST00000330374 BMP10O95393 424 aa7.93□□□□□ -1.14
VMA21-201ENST00000330374 APOA4P06727 396 aa7.93□□□□□ -1.14
VMA21-201ENST00000330374 HSD3B2P26439 372 aa7.93□□□□□ -1.14
VMA21-201ENST00000330374 CD68P34810 354 aaPredicted RBP7.93□□□□□ -1.14
VMA21-201ENST00000330374 GRM5P41594 1212 aa7.93□□□□□ -1.14
VMA21-201ENST00000330374 PTPN9P43378 593 aa7.93□□□□□ -1.14
VMA21-201ENST00000330374 STX1BP61266 288 aa7.93□□□□□ -1.14
VMA21-201ENST00000330374 PLIN5Q00G26 463 aa7.93□□□□□ -1.14
VMA21-201ENST00000330374 INCA1Q0VD86 236 aa7.93□□□□□ -1.14
VMA21-201ENST00000330374 SAMD4BQ5PRF9 694 aaKnown RBP7.93□□□□□ -1.14
VMA21-201ENST00000330374 METTL7BQ6UX53 244 aa7.93□□□□□ -1.14
VMA21-201ENST00000330374 CUZD1Q86UP6 607 aa7.93□□□□□ -1.14
VMA21-201ENST00000330374 EPHX4Q8IUS5 362 aa7.93□□□□□ -1.14
VMA21-201ENST00000330374 NPWQ8N729 165 aa7.93□□□□□ -1.14
VMA21-201ENST00000330374 HM13Q8TCT9 377 aa7.93□□□□□ -1.14
VMA21-201ENST00000330374 PIGVQ9NUD9 493 aa7.93□□□□□ -1.14
VMA21-201ENST00000330374 USP3Q9Y6I4 520 aa7.93□□□□□ -1.14
VMA21-201ENST00000330374 SOWAHBA6NEL2 793 aa7.93□□□□□ -1.14
VMA21-201ENST00000330374 SLCO1B7G3V0H7 640 aa7.93□□□□□ -1.14
VMA21-201ENST00000330374 DFFAO00273 331 aa7.93□□□□□ -1.14
VMA21-201ENST00000330374 TOR1BO14657 336 aa7.93□□□□□ -1.14
VMA21-201ENST00000330374 SLC4A1P02730 911 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms