RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 OR13J1Q8NGT2 312 aa20.41■□□□□ 0.86
RIPPLY3-201ENST00000329553 NUDCD1Q96RS6 583 aa20.41■□□□□ 0.86
RIPPLY3-201ENST00000329553 CERS4Q9HA82 394 aa20.41■□□□□ 0.86
RIPPLY3-201ENST00000329553 NSMCE4AQ9NXX6 385 aa20.41■□□□□ 0.86
RIPPLY3-201ENST00000329553 KCTD3Q9Y597 815 aa20.41■□□□□ 0.86
RIPPLY3-201ENST00000329553 HCFC2Q9Y5Z7 792 aa20.41■□□□□ 0.86
RIPPLY3-201ENST00000329553 BPTFQ12830 3046 aa20.41■□□□□ 0.86
RIPPLY3-201ENST00000329553 HELZP42694 1942 aaKnown RBP20.41■□□□□ 0.86
RIPPLY3-201ENST00000329553 LDB2O43679 373 aa20.41■□□□□ 0.86
RIPPLY3-201ENST00000329553 XYLBO75191 536 aa20.41■□□□□ 0.86
RIPPLY3-201ENST00000329553 PAPSS2O95340 614 aaPredicted RBP20.41■□□□□ 0.86
RIPPLY3-201ENST00000329553 NDST3O95803 873 aa20.41■□□□□ 0.86
RIPPLY3-201ENST00000329553 AHSGP02765 367 aa20.41■□□□□ 0.86
RIPPLY3-201ENST00000329553 ERVK-21P61565 698 aa20.41■□□□□ 0.86
RIPPLY3-201ENST00000329553 ARHGAP15Q53QZ3 475 aa20.41■□□□□ 0.86
RIPPLY3-201ENST00000329553 CMC1Q7Z7K0 106 aa20.41■□□□□ 0.86
RIPPLY3-201ENST00000329553 ACVR1CQ8NER5 493 aa20.41■□□□□ 0.86
RIPPLY3-201ENST00000329553 VPS39Q96JC1 886 aa20.41■□□□□ 0.86
RIPPLY3-201ENST00000329553 SNX15Q9NRS6 342 aa20.41■□□□□ 0.86
RIPPLY3-201ENST00000329553 YBX2Q9Y2T7 364 aaKnown RBP20.41■□□□□ 0.86
RIPPLY3-201ENST00000329553 CCDC195A0A1B0GUA6 201 aa20.4■□□□□ 0.86
RIPPLY3-201ENST00000329553 CES1P23141 567 aa20.4■□□□□ 0.86
RIPPLY3-201ENST00000329553 SERPINB4P48594 390 aa20.4■□□□□ 0.86
RIPPLY3-201ENST00000329553 LMAN2Q12907 356 aa20.4■□□□□ 0.86
RIPPLY3-201ENST00000329553 PRSS36Q5K4E3 855 aa20.4■□□□□ 0.86
RIPPLY3-201ENST00000329553 ADGRD2Q7Z7M1 963 aa20.4■□□□□ 0.86
RIPPLY3-201ENST00000329553 ZC3HC1Q86WB0 502 aaKnown RBP20.4■□□□□ 0.86
RIPPLY3-201ENST00000329553 DCAF4L2Q8NA75 395 aa20.4■□□□□ 0.86
RIPPLY3-201ENST00000329553 ARMC2Q8NEN0 867 aa20.4■□□□□ 0.86
RIPPLY3-201ENST00000329553 BLOC1S5Q8TDH9 187 aa20.4■□□□□ 0.86
RIPPLY3-201ENST00000329553 PTPRN2Q92932 1015 aa20.4■□□□□ 0.86
RIPPLY3-201ENST00000329553 ISL2Q96A47 359 aa20.4■□□□□ 0.86
RIPPLY3-201ENST00000329553 MANSC1Q9H8J5 431 aa20.4■□□□□ 0.86
RIPPLY3-201ENST00000329553 CAB39LQ9H9S4 337 aa20.4■□□□□ 0.86
RIPPLY3-201ENST00000329553 NPHS2Q9NP85 383 aa20.4■□□□□ 0.86
RIPPLY3-201ENST00000329553 TDP1Q9NUW8 608 aa20.4■□□□□ 0.86
RIPPLY3-201ENST00000329553 LHX3Q9UBR4 397 aa20.4■□□□□ 0.86
RIPPLY3-201ENST00000329553 FCF1Q9Y324 198 aaKnown RBP20.4■□□□□ 0.86
RIPPLY3-201ENST00000329553 TIMM44O43615 452 aa20.39■□□□□ 0.86
RIPPLY3-201ENST00000329553 SIN3BO75182 1162 aa20.39■□□□□ 0.86
RIPPLY3-201ENST00000329553 PRLP01236 227 aa20.39■□□□□ 0.86
RIPPLY3-201ENST00000329553 PIRTP0C851 137 aa20.39■□□□□ 0.86
RIPPLY3-201ENST00000329553 GMPRP36959 345 aa20.39■□□□□ 0.86
RIPPLY3-201ENST00000329553 MAGEA12P43365 314 aa20.39■□□□□ 0.86
RIPPLY3-201ENST00000329553 MPP1Q00013 466 aa20.39■□□□□ 0.86
RIPPLY3-201ENST00000329553 THOC5Q13769 683 aaKnown RBP20.39■□□□□ 0.86
RIPPLY3-201ENST00000329553 PDE12Q6L8Q7 609 aaKnown RBP20.39■□□□□ 0.86
RIPPLY3-201ENST00000329553 NEPROQ6NW34 567 aa20.39■□□□□ 0.86
RIPPLY3-201ENST00000329553 FIBINQ8TAL6 211 aa20.39■□□□□ 0.86
RIPPLY3-201ENST00000329553 ZNF707Q96C28 371 aaPredicted RBP20.39■□□□□ 0.86
RIPPLY3-201ENST00000329553 ZSWIM3Q96MP5 696 aa20.39■□□□□ 0.86
RIPPLY3-201ENST00000329553 PCDHGC4Q9Y5F7 938 aa20.39■□□□□ 0.86
RIPPLY3-201ENST00000329553 MYOFQ9NZM1 2061 aa20.39■□□□□ 0.86
RIPPLY3-201ENST00000329553 K7ERQ8 282 aa20.39■□□□□ 0.85
RIPPLY3-201ENST00000329553 TROVE2P10155 538 aaKnown RBP eCLIP20.39■□□□□ 0.85
RIPPLY3-201ENST00000329553 PBX2P40425 430 aa20.39■□□□□ 0.85
RIPPLY3-201ENST00000329553 RASSF2P50749 326 aa20.39■□□□□ 0.85
RIPPLY3-201ENST00000329553 GRM3Q14832 879 aa20.39■□□□□ 0.85
RIPPLY3-201ENST00000329553 TAF1BQ53T94 588 aaPredicted RBP20.39■□□□□ 0.85
RIPPLY3-201ENST00000329553 LEMD2Q8NC56 503 aa20.39■□□□□ 0.85
RIPPLY3-201ENST00000329553 SAMD11Q96NU1 681 aa20.39■□□□□ 0.85
RIPPLY3-201ENST00000329553 TDRD1Q9BXT4 1180 aaKnown RBP20.39■□□□□ 0.85
RIPPLY3-201ENST00000329553 RHOJQ9H4E5 214 aa20.39■□□□□ 0.85
RIPPLY3-201ENST00000329553 SAR1AQ9NR31 198 aa20.39■□□□□ 0.85
RIPPLY3-201ENST00000329553 KIAA1522Q9P206 1035 aaPredicted RBP20.39■□□□□ 0.85
RIPPLY3-201ENST00000329553 CCL22O00626 93 aa20.38■□□□□ 0.85
RIPPLY3-201ENST00000329553 PRAMEF12O95522 483 aa20.38■□□□□ 0.85
RIPPLY3-201ENST00000329553 PDHA1P08559 390 aa20.38■□□□□ 0.85
RIPPLY3-201ENST00000329553 RPSAP08865 295 aaKnown RBP20.38■□□□□ 0.85
RIPPLY3-201ENST00000329553 CD70P32970 193 aa20.38■□□□□ 0.85
RIPPLY3-201ENST00000329553 MAGEA10P43363 369 aaPredicted RBP20.38■□□□□ 0.85
RIPPLY3-201ENST00000329553 SERPINB8P50452 374 aa20.38■□□□□ 0.85
RIPPLY3-201ENST00000329553 ARSDP51689 593 aa20.38■□□□□ 0.85
RIPPLY3-201ENST00000329553 CCNG1P51959 295 aa20.38■□□□□ 0.85
RIPPLY3-201ENST00000329553 NSUN2Q08J23 767 aaKnown RBP eCLIP20.38■□□□□ 0.85
RIPPLY3-201ENST00000329553 DLG2Q15700 870 aa20.38■□□□□ 0.85
RIPPLY3-201ENST00000329553 CTC1Q2NKJ3 1217 aa20.38■□□□□ 0.85
RIPPLY3-201ENST00000329553 C16orf46Q6P387 395 aa20.38■□□□□ 0.85
RIPPLY3-201ENST00000329553 BRSK1Q8TDC3 778 aa20.38■□□□□ 0.85
RIPPLY3-201ENST00000329553 RSRC1Q96IZ7 334 aaKnown RBP20.38■□□□□ 0.85
RIPPLY3-201ENST00000329553 C2orf49Q9BVC5 232 aaPredicted RBP20.38■□□□□ 0.85
RIPPLY3-201ENST00000329553 ZDHHC7Q9NXF8 308 aa20.38■□□□□ 0.85
RIPPLY3-201ENST00000329553 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.38■□□□□ 0.85
RIPPLY3-201ENST00000329553 DCDC2Q9UHG0 476 aa20.38■□□□□ 0.85
RIPPLY3-201ENST00000329553 ZFP69BQ9UJL9 534 aa20.38■□□□□ 0.85
RIPPLY3-201ENST00000329553 ARIH1Q9Y4X5 557 aaPredicted RBP20.38■□□□□ 0.85
RIPPLY3-201ENST00000329553 ARL5AQ9Y689 179 aa20.38■□□□□ 0.85
RIPPLY3-201ENST00000329553 BUD23O43709 281 aaKnown RBP20.38■□□□□ 0.85
RIPPLY3-201ENST00000329553 CBX6O95503 412 aa20.38■□□□□ 0.85
RIPPLY3-201ENST00000329553 CYBBP04839 570 aa20.38■□□□□ 0.85
RIPPLY3-201ENST00000329553 SLC1A2P43004 574 aa20.38■□□□□ 0.85
RIPPLY3-201ENST00000329553 ZNF470Q6ECI4 717 aa20.38■□□□□ 0.85
RIPPLY3-201ENST00000329553 NCEH1Q6PIU2 408 aa20.38■□□□□ 0.85
RIPPLY3-201ENST00000329553 TMEM25Q86YD3 366 aa20.38■□□□□ 0.85
RIPPLY3-201ENST00000329553 C2CD4AQ8NCU7 369 aaPredicted RBP20.38■□□□□ 0.85
RIPPLY3-201ENST00000329553 HDAC10Q969S8 669 aa20.38■□□□□ 0.85
RIPPLY3-201ENST00000329553 GPR22Q99680 433 aa20.38■□□□□ 0.85
RIPPLY3-201ENST00000329553 TBC1D10AQ9BXI6 508 aa20.38■□□□□ 0.85
RIPPLY3-201ENST00000329553 LNPEPQ9UIQ6 1025 aa20.38■□□□□ 0.85
RIPPLY3-201ENST00000329553 INTS6Q9UL03 887 aaKnown RBP20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms