RNA–Protein interactions for RNA: ENST00000325617.9

CLGN-201, Transcript of calmegin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLGN, Length 3,043 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLGN-201ENST00000325617 CACNA2D2Q9NY47 1150 aa13.2□□□□□ -0.3
CLGN-201ENST00000325617 NR5A2O00482 541 aa13.2□□□□□ -0.3
CLGN-201ENST00000325617 CNTN5O94779 1100 aa13.2□□□□□ -0.3
CLGN-201ENST00000325617 FAM58BPP0C7Q3 252 aa13.2□□□□□ -0.3
CLGN-201ENST00000325617 HAPLN1P10915 354 aaPredicted RBP13.2□□□□□ -0.3
CLGN-201ENST00000325617 PRDX6P30041 224 aa13.2□□□□□ -0.3
CLGN-201ENST00000325617 SCNN1AP37088 669 aa13.2□□□□□ -0.3
CLGN-201ENST00000325617 PNPLA4P41247 253 aa13.2□□□□□ -0.3
CLGN-201ENST00000325617 CASP2P42575 452 aa13.2□□□□□ -0.3
CLGN-201ENST00000325617 SLC10A7Q0GE19 358 aa13.2□□□□□ -0.3
CLGN-201ENST00000325617 RETREG3Q86VR2 466 aa13.2□□□□□ -0.3
CLGN-201ENST00000325617 APLFQ8IW19 511 aaPredicted RBP13.2□□□□□ -0.3
CLGN-201ENST00000325617 TOP6BLQ8N6T0 577 aa13.2□□□□□ -0.3
CLGN-201ENST00000325617 PPHLN1Q8NEY8 458 aaKnown RBP13.2□□□□□ -0.3
CLGN-201ENST00000325617 OR10T2Q8NGX3 314 aa13.2□□□□□ -0.3
CLGN-201ENST00000325617 KCTD13Q8WZ19 329 aa13.2□□□□□ -0.3
CLGN-201ENST00000325617 HDAC10Q969S8 669 aa13.2□□□□□ -0.3
CLGN-201ENST00000325617 PRPF19Q9UMS4 504 aaKnown RBP13.2□□□□□ -0.3
CLGN-201ENST00000325617 ST3GAL5Q9UNP4 418 aa13.2□□□□□ -0.3
CLGN-201ENST00000325617 TCAF1Q9Y4C2 921 aa13.2□□□□□ -0.3
CLGN-201ENST00000325617 COMMD3-BMI1R4GMX3 469 aa13.2□□□□□ -0.3
CLGN-201ENST00000325617 ZSWIM8A7E2V4 1837 aa13.19□□□□□ -0.3
CLGN-201ENST00000325617 NCF1BA6NI72 391 aaPredicted RBP13.19□□□□□ -0.3
CLGN-201ENST00000325617 NCF1CA8MVU1 366 aaPredicted RBP13.19□□□□□ -0.3
CLGN-201ENST00000325617 MRASO14807 208 aa13.19□□□□□ -0.3
CLGN-201ENST00000325617 AKAP10O43572 662 aa13.19□□□□□ -0.3
CLGN-201ENST00000325617 NCF1P14598 390 aaPredicted RBP13.19□□□□□ -0.3
CLGN-201ENST00000325617 PSEN2P49810 448 aa13.19□□□□□ -0.3
CLGN-201ENST00000325617 GALK1P51570 392 aa13.19□□□□□ -0.3
CLGN-201ENST00000325617 GRB7Q14451 532 aa13.19□□□□□ -0.3
CLGN-201ENST00000325617 KIF19Q2TAC6 998 aa13.19□□□□□ -0.3
CLGN-201ENST00000325617 TICAM1Q8IUC6 712 aa13.19□□□□□ -0.3
CLGN-201ENST00000325617 KLHL23Q8NBE8 558 aa13.19□□□□□ -0.3
CLGN-201ENST00000325617 NCSTNQ92542 709 aa13.19□□□□□ -0.3
CLGN-201ENST00000325617 DPF3Q92784 378 aa13.19□□□□□ -0.3
CLGN-201ENST00000325617 DGCR14Q96DF8 476 aaKnown RBP13.19□□□□□ -0.3
CLGN-201ENST00000325617 CNDP1Q96KN2 507 aa13.19□□□□□ -0.3
CLGN-201ENST00000325617 BTBD9Q96Q07 612 aa13.19□□□□□ -0.3
CLGN-201ENST00000325617 TRHDEQ9UKU6 1024 aa13.19□□□□□ -0.3
CLGN-201ENST00000325617 ARHGAP10A1A4S6 786 aa13.19□□□□□ -0.3
CLGN-201ENST00000325617 SOCS2O14508 198 aa13.19□□□□□ -0.3
CLGN-201ENST00000325617 DENRO43583 198 aaKnown RBP13.19□□□□□ -0.3
CLGN-201ENST00000325617 ALDOCP09972 364 aaKnown RBP13.19□□□□□ -0.3
CLGN-201ENST00000325617 PLOD1Q02809 727 aaPredicted RBP13.19□□□□□ -0.3
CLGN-201ENST00000325617 FUT11Q495W5 492 aa13.19□□□□□ -0.3
CLGN-201ENST00000325617 SPPL2CQ8IUH8 684 aa13.19□□□□□ -0.3
CLGN-201ENST00000325617 ARHGAP18Q8N392 663 aa13.19□□□□□ -0.3
CLGN-201ENST00000325617 SNRNP27Q8WVK2 155 aaKnown RBP13.19□□□□□ -0.3
CLGN-201ENST00000325617 ABTB1Q969K4 478 aaPredicted RBP13.19□□□□□ -0.3
CLGN-201ENST00000325617 HBEGFQ99075 208 aa13.19□□□□□ -0.3
CLGN-201ENST00000325617 CCT7Q99832 543 aa13.19□□□□□ -0.3
CLGN-201ENST00000325617 ABHD16BQ9H3Z7 469 aa13.19□□□□□ -0.3
CLGN-201ENST00000325617 CNGB3Q9NQW8 809 aa13.19□□□□□ -0.3
CLGN-201ENST00000325617 ARHGEF37A1IGU5 675 aa13.18□□□□□ -0.3
CLGN-201ENST00000325617 ARL5CA6NH57 179 aa13.18□□□□□ -0.3
CLGN-201ENST00000325617 TRIM38O00635 465 aa13.18□□□□□ -0.3
CLGN-201ENST00000325617 MTHFD1P11586 935 aaKnown RBP13.18□□□□□ -0.3
CLGN-201ENST00000325617 NCK1P16333 377 aa13.18□□□□□ -0.3
CLGN-201ENST00000325617 ATP6V1B2P21281 511 aa13.18□□□□□ -0.3
CLGN-201ENST00000325617 LRPAP1P30533 357 aa13.18□□□□□ -0.3
CLGN-201ENST00000325617 COG7P83436 770 aa13.18□□□□□ -0.3
CLGN-201ENST00000325617 TRIML2Q8N7C3 387 aa13.18□□□□□ -0.3
CLGN-201ENST00000325617 NAT16Q8N8M0 369 aa13.18□□□□□ -0.3
CLGN-201ENST00000325617 NTAN1Q96AB6 310 aa13.18□□□□□ -0.3
CLGN-201ENST00000325617 PTERQ96BW5 349 aa13.18□□□□□ -0.3
CLGN-201ENST00000325617 DCUN1D5Q9BTE7 237 aa13.18□□□□□ -0.3
CLGN-201ENST00000325617 OSER1Q9NX31 292 aa13.18□□□□□ -0.3
CLGN-201ENST00000325617 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.18□□□□□ -0.3
CLGN-201ENST00000325617 TIMM22Q9Y584 194 aa13.18□□□□□ -0.3
CLGN-201ENST00000325617 SMIM35A0A1B0GVV1 85 aa13.18□□□□□ -0.3
CLGN-201ENST00000325617 RRN3P2A6NIE6 340 aa13.18□□□□□ -0.3
CLGN-201ENST00000325617 XPOTO43592 962 aaKnown RBP13.18□□□□□ -0.3
CLGN-201ENST00000325617 ASLP04424 464 aa13.18□□□□□ -0.3
CLGN-201ENST00000325617 THP07101 528 aa13.18□□□□□ -0.3
CLGN-201ENST00000325617 SCNN1BP51168 640 aa13.18□□□□□ -0.3
CLGN-201ENST00000325617 NDST2P52849 883 aa13.18□□□□□ -0.3
CLGN-201ENST00000325617 IKBKEQ14164 716 aa13.18□□□□□ -0.3
CLGN-201ENST00000325617 TRIM25Q14258 630 aaKnown RBP13.18□□□□□ -0.3
CLGN-201ENST00000325617 LIMS2Q7Z4I7 341 aa13.18□□□□□ -0.3
CLGN-201ENST00000325617 FUNDC1Q8IVP5 155 aa13.18□□□□□ -0.3
CLGN-201ENST00000325617 CPSF7Q8N684 471 aaKnown RBP13.18□□□□□ -0.3
CLGN-201ENST00000325617 TBATAQ96M53 351 aa13.18□□□□□ -0.3
CLGN-201ENST00000325617 MAF1Q9H063 256 aa13.18□□□□□ -0.3
CLGN-201ENST00000325617 AGO3Q9H9G7 860 aaKnown RBP13.18□□□□□ -0.3
CLGN-201ENST00000325617 NEU3Q9UQ49 428 aa13.18□□□□□ -0.3
CLGN-201ENST00000325617 PLXNB2O15031 1838 aa13.18□□□□□ -0.3
CLGN-201ENST00000325617 RBM47A0AV96 593 aaKnown RBP13.18□□□□□ -0.3
CLGN-201ENST00000325617 MAGEB16A2A368 324 aa13.18□□□□□ -0.3
CLGN-201ENST00000325617 F2P00734 622 aa13.18□□□□□ -0.3
CLGN-201ENST00000325617 LINC00032P0C843 101 aa13.18□□□□□ -0.3
CLGN-201ENST00000325617 YAP1P46937 504 aaKnown RBP13.18□□□□□ -0.3
CLGN-201ENST00000325617 CSRP3P50461 194 aa13.18□□□□□ -0.3
CLGN-201ENST00000325617 LRP8Q14114 963 aa13.18□□□□□ -0.3
CLGN-201ENST00000325617 TBC1D25Q3MII6 688 aa13.18□□□□□ -0.3
CLGN-201ENST00000325617 ALFQ53S48 1182 aa13.18□□□□□ -0.3
CLGN-201ENST00000325617 TECRLQ5HYJ1 363 aa13.18□□□□□ -0.3
CLGN-201ENST00000325617 DDIASQ8IXT1 998 aa13.18□□□□□ -0.3
CLGN-201ENST00000325617 OFCC1Q8IZS5 231 aa13.18□□□□□ -0.3
CLGN-201ENST00000325617 PTPN18Q99952 460 aa13.18□□□□□ -0.3
CLGN-201ENST00000325617 IPO11Q9UI26 975 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms