RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 IQCKQ8N0W5 287 aa16.01■□□□□ 0.15
USP42-201ENST00000306177 CLYBLQ8N0X4 340 aa16.01■□□□□ 0.15
USP42-201ENST00000306177 NKD2Q969F2 451 aaPredicted RBP16.01■□□□□ 0.15
USP42-201ENST00000306177 BCLAF3A2AJT9 711 aaKnown RBP16.01■□□□□ 0.15
USP42-201ENST00000306177 EDF1O60869 148 aaKnown RBP16.01■□□□□ 0.15
USP42-201ENST00000306177 ZMPSTE24O75844 475 aa16.01■□□□□ 0.15
USP42-201ENST00000306177 CDKN2BP42772 138 aa16.01■□□□□ 0.15
USP42-201ENST00000306177 PARP15Q460N3 678 aa16.01■□□□□ 0.15
USP42-201ENST00000306177 CERCAMQ5T4B2 595 aa16.01■□□□□ 0.15
USP42-201ENST00000306177 EPHX4Q8IUS5 362 aa16.01■□□□□ 0.15
USP42-201ENST00000306177 PLD5Q8N7P1 536 aa16.01■□□□□ 0.15
USP42-201ENST00000306177 LINGO1Q96FE5 620 aa16.01■□□□□ 0.15
USP42-201ENST00000306177 AHCYL2Q96HN2 611 aaKnown RBP16.01■□□□□ 0.15
USP42-201ENST00000306177 COPS8Q99627 209 aa16.01■□□□□ 0.15
USP42-201ENST00000306177 XPNPEP1Q9NQW7 623 aa16.01■□□□□ 0.15
USP42-201ENST00000306177 KIAA1522Q9P206 1035 aaPredicted RBP16.01■□□□□ 0.15
USP42-201ENST00000306177 PADI3Q9ULW8 664 aa16.01■□□□□ 0.15
USP42-201ENST00000306177 TK2O00142 265 aa16.01■□□□□ 0.15
USP42-201ENST00000306177 CTSEP14091 401 aa16.01■□□□□ 0.15
USP42-201ENST00000306177 TSPAN8P19075 237 aa16.01■□□□□ 0.15
USP42-201ENST00000306177 MAGEA10P43363 369 aaPredicted RBP16.01■□□□□ 0.15
USP42-201ENST00000306177 INAQ16352 499 aa16.01■□□□□ 0.15
USP42-201ENST00000306177 POM121L1PQ3SYA9 428 aa16.01■□□□□ 0.15
USP42-201ENST00000306177 INO80DQ53TQ3 878 aaPredicted RBP16.01■□□□□ 0.15
USP42-201ENST00000306177 CMC1Q7Z7K0 106 aa16.01■□□□□ 0.15
USP42-201ENST00000306177 SNRNP27Q8WVK2 155 aaKnown RBP16.01■□□□□ 0.15
USP42-201ENST00000306177 SLC44A1Q8WWI5 657 aa16.01■□□□□ 0.15
USP42-201ENST00000306177 CDH19Q9H159 772 aa16.01■□□□□ 0.15
USP42-201ENST00000306177 LRMDAQ9H2I8 198 aa16.01■□□□□ 0.15
USP42-201ENST00000306177 RPS6KA6Q9UK32 745 aa16.01■□□□□ 0.15
USP42-201ENST00000306177 LINC00854A0A1B0GVQ3 168 aa16.01■□□□□ 0.15
USP42-201ENST00000306177 MFSD11O43934 449 aa16.01■□□□□ 0.15
USP42-201ENST00000306177 MYL12AP19105 171 aa16.01■□□□□ 0.15
USP42-201ENST00000306177 ATP6V1C1P21283 382 aa16.01■□□□□ 0.15
USP42-201ENST00000306177 GABRR2P28476 465 aa16.01■□□□□ 0.15
USP42-201ENST00000306177 EPHA3P29320 983 aa16.01■□□□□ 0.15
USP42-201ENST00000306177 CCDC92Q53HC0 331 aaPredicted RBP16.01■□□□□ 0.15
USP42-201ENST00000306177 INTS6LQ5JSJ4 861 aaKnown RBP16.01■□□□□ 0.15
USP42-201ENST00000306177 VMP1Q96GC9 406 aa16.01■□□□□ 0.15
USP42-201ENST00000306177 FAIM2Q9BWQ8 316 aa16.01■□□□□ 0.15
USP42-201ENST00000306177 ZFP14Q9HCL3 533 aa16.01■□□□□ 0.15
USP42-201ENST00000306177 NALCNQ8IZF0 1738 aa16.01■□□□□ 0.15
USP42-201ENST00000306177 MDM4O15151 490 aa16■□□□□ 0.15
USP42-201ENST00000306177 DUSP11O75319 330 aaKnown RBP16■□□□□ 0.15
USP42-201ENST00000306177 HNRNPLP14866 589 aaKnown RBP eCLIP16■□□□□ 0.15
USP42-201ENST00000306177 TLX1P31314 330 aaPredicted RBP16■□□□□ 0.15
USP42-201ENST00000306177 HTR7P34969 479 aa16■□□□□ 0.15
USP42-201ENST00000306177 CLVS1Q8IUQ0 354 aaPredicted RBP16■□□□□ 0.15
USP42-201ENST00000306177 CD101Q93033 1021 aa16■□□□□ 0.15
USP42-201ENST00000306177 RNFT2Q96EX2 444 aa16■□□□□ 0.15
USP42-201ENST00000306177 AGO3Q9H9G7 860 aaKnown RBP16■□□□□ 0.15
USP42-201ENST00000306177 CYLDQ9NQC7 956 aa16■□□□□ 0.15
USP42-201ENST00000306177 MSRAQ9UJ68 235 aa16■□□□□ 0.15
USP42-201ENST00000306177 PHLPP1O60346 1717 aa16■□□□□ 0.15
USP42-201ENST00000306177 PTGES3LE9PB15 166 aa16■□□□□ 0.15
USP42-201ENST00000306177 NDUFB5O43674 189 aa16■□□□□ 0.15
USP42-201ENST00000306177 IL1BP01584 269 aa16■□□□□ 0.15
USP42-201ENST00000306177 NTRK1P04629 796 aa16■□□□□ 0.15
USP42-201ENST00000306177 VAV1P15498 845 aa16■□□□□ 0.15
USP42-201ENST00000306177 SMPD1P17405 629 aa16■□□□□ 0.15
USP42-201ENST00000306177 GLUD2P49448 558 aa16■□□□□ 0.15
USP42-201ENST00000306177 TNK2Q07912 1038 aa16■□□□□ 0.15
USP42-201ENST00000306177 PRKG2Q13237 762 aa16■□□□□ 0.15
USP42-201ENST00000306177 PACS2Q86VP3 889 aa16■□□□□ 0.15
USP42-201ENST00000306177 OR8H2Q8N162 312 aa16■□□□□ 0.15
USP42-201ENST00000306177 ZFP28Q8NHY6 868 aa16■□□□□ 0.15
USP42-201ENST00000306177 DNAJB14Q8TBM8 379 aa16■□□□□ 0.15
USP42-201ENST00000306177 DEFB118Q96PH6 123 aa16■□□□□ 0.15
USP42-201ENST00000306177 KCPQ6ZWJ8 1503 aa16■□□□□ 0.15
USP42-201ENST00000306177 LYPLA1O75608 230 aaPredicted RBP16■□□□□ 0.15
USP42-201ENST00000306177 BPGMP07738 259 aa16■□□□□ 0.15
USP42-201ENST00000306177 SELPP16109 830 aa16■□□□□ 0.15
USP42-201ENST00000306177 FGFR3P22607 806 aa16■□□□□ 0.15
USP42-201ENST00000306177 BNIP2Q12982 314 aa16■□□□□ 0.15
USP42-201ENST00000306177 NRF1Q16656 503 aa16■□□□□ 0.15
USP42-201ENST00000306177 XKR6Q5GH73 641 aa16■□□□□ 0.15
USP42-201ENST00000306177 CNSTQ6PJW8 725 aa16■□□□□ 0.15
USP42-201ENST00000306177 C8orf59Q8N0T1 100 aaPredicted RBP16■□□□□ 0.15
USP42-201ENST00000306177 LRRC57Q8N9N7 239 aa16■□□□□ 0.15
USP42-201ENST00000306177 MYO19Q96H55 970 aa16■□□□□ 0.15
USP42-201ENST00000306177 QKIQ96PU8 341 aaKnown RBP eCLIP16■□□□□ 0.15
USP42-201ENST00000306177 TRMOQ9BU70 441 aa16■□□□□ 0.15
USP42-201ENST00000306177 CORO2BQ9UQ03 480 aa16■□□□□ 0.15
USP42-201ENST00000306177 NFKBIEO00221 500 aa16■□□□□ 0.15
USP42-201ENST00000306177 PTPN9P43378 593 aa16■□□□□ 0.15
USP42-201ENST00000306177 FAM46CQ5VWP2 391 aa16■□□□□ 0.15
USP42-201ENST00000306177 MIEF2Q96C03 454 aa16■□□□□ 0.15
USP42-201ENST00000306177 DEPDC7Q96QD5 511 aa16■□□□□ 0.15
USP42-201ENST00000306177 MECRQ9BV79 373 aa16■□□□□ 0.15
USP42-201ENST00000306177 TTYH3Q9C0H2 523 aa16■□□□□ 0.15
USP42-201ENST00000306177 EPB41L4BQ9H329 900 aa16■□□□□ 0.15
USP42-201ENST00000306177 BRD9Q9H8M2 597 aa16■□□□□ 0.15
USP42-201ENST00000306177 CAB39LQ9H9S4 337 aa16■□□□□ 0.15
USP42-201ENST00000306177 SLC17A7Q9P2U7 560 aa16■□□□□ 0.15
USP42-201ENST00000306177 RGPD8O14715 1765 aaPredicted RBP16■□□□□ 0.15
USP42-201ENST00000306177 FAM208AQ9UK61 1670 aaKnown RBP16■□□□□ 0.15
USP42-201ENST00000306177 TMEM88BA6NKF7 163 aa15.99■□□□□ 0.15
USP42-201ENST00000306177 MYL12BO14950 172 aa15.99■□□□□ 0.15
USP42-201ENST00000306177 FEN1P39748 380 aaKnown RBP15.99■□□□□ 0.15
USP42-201ENST00000306177 POLD2P49005 469 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms