RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 GRAMD1AQ96CP6 724 aa9.31□□□□□ -0.92
PTPRE-202ENST00000306042 KLHL29Q96CT2 875 aa9.31□□□□□ -0.92
PTPRE-202ENST00000306042 PHF21BQ96EK2 531 aa9.31□□□□□ -0.92
PTPRE-202ENST00000306042 ZFYVE19Q96K21 471 aa9.31□□□□□ -0.92
PTPRE-202ENST00000306042 SUV39H2Q9H5I1 410 aa9.31□□□□□ -0.92
PTPRE-202ENST00000306042 MRGBPQ9NV56 204 aa9.31□□□□□ -0.92
PTPRE-202ENST00000306042 AJAP1Q9UKB5 411 aaPredicted RBP9.31□□□□□ -0.92
PTPRE-202ENST00000306042 PHTF1Q9UMS5 762 aa9.31□□□□□ -0.92
PTPRE-202ENST00000306042 SSC5DA1L4H1 1573 aa9.31□□□□□ -0.92
PTPRE-202ENST00000306042 TRPC5OSA6NMA1 111 aa9.31□□□□□ -0.92
PTPRE-202ENST00000306042 RHPN2P1A8MT19 583 aa9.31□□□□□ -0.92
PTPRE-202ENST00000306042 CD3EAPO15446 510 aaKnown RBP9.31□□□□□ -0.92
PTPRE-202ENST00000306042 KATNA1O75449 491 aa9.31□□□□□ -0.92
PTPRE-202ENST00000306042 EIF2S1P05198 315 aaKnown RBP9.31□□□□□ -0.92
PTPRE-202ENST00000306042 ANXA6P08133 673 aa9.31□□□□□ -0.92
PTPRE-202ENST00000306042 MYOGP15173 224 aa9.31□□□□□ -0.92
PTPRE-202ENST00000306042 RPA3P35244 121 aaPredicted RBP9.31□□□□□ -0.92
PTPRE-202ENST00000306042 DPYSL2Q16555 572 aa9.31□□□□□ -0.92
PTPRE-202ENST00000306042 PAGE2BQ5JRK9 111 aa9.31□□□□□ -0.92
PTPRE-202ENST00000306042 TMEM164Q5U3C3 297 aa9.31□□□□□ -0.92
PTPRE-202ENST00000306042 FAM45BPQ6NSW5 357 aa9.31□□□□□ -0.92
PTPRE-202ENST00000306042 PRELID2Q8N945 189 aa9.31□□□□□ -0.92
PTPRE-202ENST00000306042 OR2AP1Q8NGE2 309 aa9.31□□□□□ -0.92
PTPRE-202ENST00000306042 FAM45AQ8TCE6 357 aa9.31□□□□□ -0.92
PTPRE-202ENST00000306042 QKIQ96PU8 341 aaKnown RBP eCLIP9.31□□□□□ -0.92
PTPRE-202ENST00000306042 OSBPL1AQ9BXW6 950 aa9.31□□□□□ -0.92
PTPRE-202ENST00000306042 ABCG8Q9H221 673 aa9.31□□□□□ -0.92
PTPRE-202ENST00000306042 MRPL40Q9NQ50 206 aaKnown RBP9.31□□□□□ -0.92
PTPRE-202ENST00000306042 ADA2Q9NZK5 511 aa9.31□□□□□ -0.92
PTPRE-202ENST00000306042 CD84Q9UIB8 345 aa9.31□□□□□ -0.92
PTPRE-202ENST00000306042 SNAP91O60641 907 aa9.31□□□□□ -0.92
PTPRE-202ENST00000306042 SKIV2L2P42285 1042 aaKnown RBP9.31□□□□□ -0.92
PTPRE-202ENST00000306042 CLCN5P51795 746 aa9.31□□□□□ -0.92
PTPRE-202ENST00000306042 CNGA3Q16281 694 aa9.31□□□□□ -0.92
PTPRE-202ENST00000306042 PLA2G4EQ3MJ16 856 aa9.31□□□□□ -0.92
PTPRE-202ENST00000306042 AGBL2Q5U5Z8 902 aa9.31□□□□□ -0.92
PTPRE-202ENST00000306042 CNSTQ6PJW8 725 aa9.31□□□□□ -0.92
PTPRE-202ENST00000306042 UNC5AQ6ZN44 842 aa9.31□□□□□ -0.92
PTPRE-202ENST00000306042 FAM9CQ8IZT9 166 aa9.31□□□□□ -0.92
PTPRE-202ENST00000306042 ZSCAN1Q8NBB4 408 aa9.31□□□□□ -0.92
PTPRE-202ENST00000306042 EPS8L3Q8TE67 593 aaKnown RBP9.31□□□□□ -0.92
PTPRE-202ENST00000306042 MRPL38Q96DV4 380 aaKnown RBP9.31□□□□□ -0.92
PTPRE-202ENST00000306042 ZNF599Q96NL3 588 aa9.31□□□□□ -0.92
PTPRE-202ENST00000306042 LRRC37BQ96QE4 947 aa9.31□□□□□ -0.92
PTPRE-202ENST00000306042 FANCEQ9HB96 536 aa9.31□□□□□ -0.92
PTPRE-202ENST00000306042 OPTCQ9UBM4 332 aa9.31□□□□□ -0.92
PTPRE-202ENST00000306042 BAIAP2L1Q9UHR4 511 aa9.31□□□□□ -0.92
PTPRE-202ENST00000306042 ITM2BQ9Y287 266 aa9.31□□□□□ -0.92
PTPRE-202ENST00000306042 TRBV23OR9-2A0A075B6M9 112 aa9.3□□□□□ -0.92
PTPRE-202ENST00000306042 PPFIA2O75334 1257 aa9.3□□□□□ -0.92
PTPRE-202ENST00000306042 SKAP2O75563 359 aaPredicted RBP9.3□□□□□ -0.92
PTPRE-202ENST00000306042 KAT7O95251 611 aa9.3□□□□□ -0.92
PTPRE-202ENST00000306042 HOXD8P13378 290 aaPredicted RBP9.3□□□□□ -0.92
PTPRE-202ENST00000306042 CPA3P15088 417 aa9.3□□□□□ -0.92
PTPRE-202ENST00000306042 CXCR3P49682 368 aa9.3□□□□□ -0.92
PTPRE-202ENST00000306042 LRRC74AQ0VAA2 488 aa9.3□□□□□ -0.92
PTPRE-202ENST00000306042 UAP1L1Q3KQV9 507 aa9.3□□□□□ -0.92
PTPRE-202ENST00000306042 FNBP1LQ5T0N5 605 aa9.3□□□□□ -0.92
PTPRE-202ENST00000306042 PTCRAQ6ISU1 281 aaPredicted RBP9.3□□□□□ -0.92
PTPRE-202ENST00000306042 RTL10Q7L3V2 364 aa9.3□□□□□ -0.92
PTPRE-202ENST00000306042 ASZ1Q8WWH4 475 aa9.3□□□□□ -0.92
PTPRE-202ENST00000306042 ZIM3Q96PE6 472 aa9.3□□□□□ -0.92
PTPRE-202ENST00000306042 HAPLN2Q9GZV7 340 aa9.3□□□□□ -0.92
PTPRE-202ENST00000306042 GBA3Q9H227 469 aa9.3□□□□□ -0.92
PTPRE-202ENST00000306042 SEMA4AQ9H3S1 761 aa9.3□□□□□ -0.92
PTPRE-202ENST00000306042 ELOVL2Q9NXB9 296 aa9.3□□□□□ -0.92
PTPRE-202ENST00000306042 HCSTQ9UBK5 93 aa9.3□□□□□ -0.92
PTPRE-202ENST00000306042 ANKDD1BA6NHY2 528 aa9.3□□□□□ -0.92
PTPRE-202ENST00000306042 CXCR2P25025 360 aa9.3□□□□□ -0.92
PTPRE-202ENST00000306042 GRIA2P42262 883 aa9.3□□□□□ -0.92
PTPRE-202ENST00000306042 RFX3P48380 749 aa9.3□□□□□ -0.92
PTPRE-202ENST00000306042 ARRB1P49407 418 aaPredicted RBP9.3□□□□□ -0.92
PTPRE-202ENST00000306042 CA9Q16790 459 aa9.3□□□□□ -0.92
PTPRE-202ENST00000306042 LRRC73Q5JTD7 316 aa9.3□□□□□ -0.92
PTPRE-202ENST00000306042 ANKS6Q68DC2 871 aa9.3□□□□□ -0.92
PTPRE-202ENST00000306042 ZNF662Q6ZS27 426 aa9.3□□□□□ -0.92
PTPRE-202ENST00000306042 CREG2Q8IUH2 290 aa9.3□□□□□ -0.92
PTPRE-202ENST00000306042 PIP4K2CQ8TBX8 421 aa9.3□□□□□ -0.92
PTPRE-202ENST00000306042 OTUB1Q96FW1 271 aaPredicted RBP9.3□□□□□ -0.92
PTPRE-202ENST00000306042 PRMT1Q99873 361 aaKnown RBP9.3□□□□□ -0.92
PTPRE-202ENST00000306042 NMUR1Q9HB89 426 aa9.3□□□□□ -0.92
PTPRE-202ENST00000306042 NDE1Q9NXR1 346 aa9.3□□□□□ -0.92
PTPRE-202ENST00000306042 PCYOX1Q9UHG3 505 aa9.3□□□□□ -0.92
PTPRE-202ENST00000306042 GRIN2DO15399 1336 aa9.3□□□□□ -0.92
PTPRE-202ENST00000306042 BCLAF3A2AJT9 711 aaKnown RBP9.3□□□□□ -0.92
PTPRE-202ENST00000306042 GMNCA6NCL1 334 aa9.3□□□□□ -0.92
PTPRE-202ENST00000306042 TCP11X1B4DZS4 312 aa9.3□□□□□ -0.92
PTPRE-202ENST00000306042 KLHL41O60662 606 aa9.3□□□□□ -0.92
PTPRE-202ENST00000306042 PYGBP11216 843 aa9.3□□□□□ -0.92
PTPRE-202ENST00000306042 CHN1P15882 459 aa9.3□□□□□ -0.92
PTPRE-202ENST00000306042 ABCG1P45844 678 aa9.3□□□□□ -0.92
PTPRE-202ENST00000306042 RING1Q06587 406 aa9.3□□□□□ -0.92
PTPRE-202ENST00000306042 GALNTL6Q49A17 601 aa9.3□□□□□ -0.92
PTPRE-202ENST00000306042 SPATA24Q86W54 205 aa9.3□□□□□ -0.92
PTPRE-202ENST00000306042 GPR135Q8IZ08 494 aa9.3□□□□□ -0.92
PTPRE-202ENST00000306042 DCAF4L2Q8NA75 395 aa9.3□□□□□ -0.92
PTPRE-202ENST00000306042 TTYH3Q9C0H2 523 aa9.3□□□□□ -0.92
PTPRE-202ENST00000306042 MANSC1Q9H8J5 431 aa9.3□□□□□ -0.92
PTPRE-202ENST00000306042 VIPAS39Q9H9C1 493 aa9.3□□□□□ -0.92
PTPRE-202ENST00000306042 MIEF1Q9NQG6 463 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms